RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Iglc2P01844 104 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Prdm6Q3UZD5 596 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 EtdQ80SW5 59 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Mrpl27Q99N92 148 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Dnajb12Q9QYI4 376 aaKnown RBP7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Ighv6-4A0A0A6YX19 119 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Gm20532G3UXR8 106 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Slc36a4Q8CH36 500 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Fam110aQ8R184 296 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Cst10Q9JM84 148 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Gpr34Q9R1K6 375 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Pglyrp3A1A547 347 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Olfr624F8VQI7 308 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 3110021N24RikJ3QMN2 152 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Tpsb2P21845 276 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Sult1a1P52840 291 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Pdlim4P70271 330 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 UngP97931 306 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Zfp970Q08BU3 522 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Tgfbr1Q64729 503 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Pef1Q8BFY6 275 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Fam78bQ8BQN5 261 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Wipi1Q8R3E3 446 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Olfr1295Q8VF48 312 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Olfr262Q8VFV8 312 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Rnf126Q91YL2 313 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Ufc1Q9CR09 167 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Ap5s1Q9D742 170 aa7.06□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Gm28845A0A087WR76 214 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Frrs1lB1AXV0 293 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Gm9376G3UW68 176 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Olfr1154L7MU57 310 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Hoxb2P0C1T1 354 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Spam1P48794 512 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Rpl30P62889 115 aaKnown RBP7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Trav6d-4Q5R1I0 115 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 AgaQ64191 346 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 RnasekQ8K3C0 98 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Trav6d-3A0A075B6B3 112 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Gm3045A0A1D5RMA1 209 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Ifitm7G3X9Z2 141 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 P18526 117 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 P18529 117 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 MgpP19788 104 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Q5BN45 167 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Trav6-3Q5R1E6 112 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Arg1Q61176 323 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Acaa1bQ8VCH0 424 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Olfr802Q8VGJ2 312 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Olfr1458A0A1L1SSD5 307 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Gm14412A2ARR7 526 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 E430018J23RikE9PZQ8 461 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 P06323 132 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 SelenotP62342 195 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Wdr83osQ6ZWX0 106 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Klk15Q8CGR4 254 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Olfr972Q9EQA2 314 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Rnf212F6TQD1 307 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Ear14F6YUX7 155 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Rnase2O35291 155 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Pax1P09084 446 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 ParlQ5XJY4 377 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Gm10334Q792Y8 246 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Ankrd55Q8BLD6 626 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Pitpnc1Q8K4R4 332 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 RpeQ8VEE0 228 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Cisd1Q91WS0 108 aaKnown RBP7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Mbnl1Q9JKP5 341 aaKnown RBP7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 NacaP70670 2187 aaKnown RBP7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Ighv1-36A0A0A6YXT2 117 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Gm15114B1B0X6 433 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Cldn34c3J3QJW5 233 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Gm20825J3QM67 227 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 A630076J17RikJ3QQ32 107 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 P01649 108 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Olfr1537P34983 314 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Ssty2Q149W4 227 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Gm21394Q497R7 227 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Gm20854Q62461 227 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 AdoQ6PDY2 256 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Psg22Q810J1 475 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Acsm5Q8BGA8 578 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Olfr1413Q8VGU3 323 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Gpr132Q9Z282 382 aa7.05□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Ighv1-18A0A0A6YXN4 117 aa7.04□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Zfp971A2BFG8 470 aa7.04□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Esp23A8R0V5 104 aa7.04□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Ccl11P48298 97 aa7.04□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Srrm4Q8BKA3 608 aa7.04□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Gm10309Q8C648 119 aa7.04□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Olfr1272Q8VGN8 308 aa7.04□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Mgst1Q91VS7 155 aa7.04□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Q9CR34 168 aa7.04□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Gm14548E9Q1Z6 680 aa7.04□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Gm10665K7N6B7 321 aa7.04□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Cd96Q3U0X8 602 aa7.04□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Tmprss12Q3V0Q7 336 aa7.04□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Znf260Q62513 407 aa7.04□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Olfr1437Q7TQR7 312 aa7.04□□□□□ -1.28
Sf3b1-201ENSMUST00000027127 Rgs13Q8K443 158 aa7.04□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 41.4 ms