RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 P01783 136 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Hist1h1eP43274 219 aaKnown RBP9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Ifna13Q80SU4 189 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Lrtm1Q8BXQ3 356 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 PaxxQ8K0Y7 205 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Ubtd1Q91WB7 227 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Pip4p2Q9CZX7 257 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 AmtnQ9D3J8 213 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Hoxa1P09022 331 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 GfralQ6SJE0 393 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Poc1bQ8BHD1 476 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr1202Q8VF98 309 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr507Q8VG13 316 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Q9CQ90 155 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Vmn1r50Q9EP51 310 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Fstl3Q9EQC7 256 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Bod1lE9Q6J5 3032 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm4565A0A140LJ87 301 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Zfp930A0A1D5RM15 441 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Foxi3E0CZH3 425 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm6176J3QK59 301 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Meox1P32442 253 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 GferP56213 198 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 F7P70375 446 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm4567Q3UTA8 301 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr153Q7TR48 307 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr91Q7TRL3 312 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 AdtrpQ8C138 230 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Klre1Q8CJC7 226 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr1228Q8VGM9 323 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Cmtm2bQ9DAC0 210 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Mixl1Q9WUI0 231 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Abca2P41234 2434 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 1500009C09RikD3YYW9 81 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 SstP60041 116 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm11110Q3U4K9 109 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Cd52Q64389 74 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr1383Q7TQT2 311 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr223Q8VF69 319 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr968Q8VFN4 314 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr344Q8VFP9 309 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr346Q8VGJ7 309 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Tmem147Q9CQG6 224 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Notch2O35516 2470 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Trav18A0A075B656 109 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm14408E9Q6B9 136 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 TgfaP48030 159 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Mbd6Q3TY92 1003 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Reep5Q60870 185 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Klhdc3Q8VEM9 382 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr523Q8VFE7 317 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 MNCb-2875Q9DCB3 74 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Rspo1Q9Z132 265 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr175-ps1A0A140T8K4 308 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm20422E9PUR3 255 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm10036E9PYL9 178 aaKnown RBP9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Nudt10P0C027 164 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Nudt11P0C028 164 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr147Q60886 317 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr924Q7TRB8 308 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 TslpQ9JIE6 140 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 CnmdQ9Z1F6 334 aa9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Nup210Q9QY81 1886 aaKnown RBP9.11□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm44596A0A0N4SVA0 210 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Nat8f4G5E8L3 226 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm10881P01642 115 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gpm6bP35803 328 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Trav6d-4Q5R1I0 115 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Sap30lQ5SQF8 182 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Vdac1Q60932 296 aaKnown RBP9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 TecrQ9CY27 308 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Tex43Q9D9I1 141 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Cml1Q9JIZ0 222 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Hdgfl3Q9JMG7 202 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Wnt16Q9QYS1 364 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Usp9xP70398 2559 aaKnown RBP9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm4791J3QQ14 102 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 BokO35425 213 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Mamld1P0C6A2 803 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 BsgP18572 389 aaKnown RBP9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 VhlP40338 181 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Sox15P43267 231 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 ErhP84089 104 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Dlx1Q64317 255 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Snrnp40Q6PE01 358 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Zfp729bQ80VN4 1045 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Harbi1Q8BR93 349 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Aifm1Q9Z0X1 612 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Igkv13-85A0A075B666 115 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr1458A0A1L1SSD5 307 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 H2al1jA2BFR3 109 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Znf431E9QAG8 526 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Tnfaip6O08859 275 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Cdkn1bP46414 197 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Trav3-3Q5R1C3 114 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Vdac2Q60930 295 aaKnown RBP9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Tlcd2Q8VC26 310 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr76Q8VFV2 317 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 PpbpQ9EQI5 113 aa9.1□□□□□ -0.95
Msh3-201ENSMUST00000022220 St6galnac3Q9WUV2 305 aa9.1□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms