RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Tmem170aQ9D342 144 aa12.21□□□□□ -0.45
Pcdha8-201ENSMUST00000194038 Npc2Q9Z0J0 149 aa12.21□□□□□ -0.45
Pcdha8-201ENSMUST00000194038 2410004P03RikA0A087WQY2 205 aa12.21□□□□□ -0.45
Pcdha8-201ENSMUST00000194038 Gm12355A2A4X6 163 aa12.21□□□□□ -0.45
Pcdha8-201ENSMUST00000194038 Srsf3P84104 164 aaKnown RBP12.21□□□□□ -0.45
Pcdha8-201ENSMUST00000194038 Gfra1P97785 468 aa12.21□□□□□ -0.45
Pcdha8-201ENSMUST00000194038 GfralQ6SJE0 393 aa12.21□□□□□ -0.45
Pcdha8-201ENSMUST00000194038 Hist1h2bmP10854 126 aa12.21□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Defb4P82019 63 aa12.21□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Hist1h2bhQ64478 126 aa12.21□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Hist2h2bbQ64525 126 aa12.21□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Hist1h2bcQ6ZWY9 126 aaKnown RBP12.21□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Shisal2bQ9D1Y9 158 aa12.21□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Mlf1Q9QWV4 267 aa12.21□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Gm14443A2ARX0 610 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Olfr466E9Q2B9 308 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Rpl23P62830 140 aaKnown RBP12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 D130052B06RikQ3UW13 202 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Olfr875Q7TRE5 310 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Ndufs8Q8K3J1 212 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Olfr1012Q8VFJ7 311 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Gm16442D3YZG3 307 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Gm4791J3QQ14 102 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Gm10190Q8BSD7 107 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Tmem196V9GX04 182 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Gm4881A0A140LIR9 352 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Gm2381G3UY53 305 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 EtdQ80SW5 59 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Fbxo46Q8BG80 603 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Fam214bQ8BR27 538 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Myo7aP97479 2215 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Kntc1Q8C3Y4 2207 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 NacaP70670 2187 aaKnown RBP12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Trav6d-5A0A075B6B9 112 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Ren2P00796 401 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Poc1aQ8JZX3 405 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Ly6g6eQ8K1T6 166 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Insig2Q91WG1 225 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Erg28Q9ERY9 140 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Fbxw4Q9JMJ2 410 aa12.2□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 BokO35425 213 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Gstp1P19157 210 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Gm9733Q1AN91 178 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Tspan7Q62283 249 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Tbr1Q64336 681 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Gm9881Q8BR56 211 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Cryba2Q9JJV1 197 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 CcsQ9WU84 274 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 AplnrQ9WV08 377 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Trav16A0A075B653 116 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Trbv1A0A0B4J1G7 116 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Gm45736A0A1B0GS18 427 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Gm10428J3QNV7 132 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Lcn2P11672 200 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Foxa2P35583 459 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Slc25a35Q5SWT3 300 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Nhlrc3Q8CCH2 347 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Cox19Q8K0C8 92 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Tmem126aQ9D8Y1 196 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Gpr132Q9Z282 382 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Ltbp1Q8CG19 1712 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Dock11A2AF47 2073 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 P01759 136 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 C1ql2Q8CFR0 287 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Ndufb3Q9CQZ6 104 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Tmem160Q9D938 188 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Q9DAS2 200 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Ccl28Q9JIL2 130 aa12.19□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 NrepQ07475 68 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Dirc2Q8BFQ6 478 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Tmem189Q99LQ7 271 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Fmc1Q9CR13 113 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Spcs1Q9D958 161 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Lime1Q9EQR5 269 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Il17bQ9QXT6 180 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Gm3045A0A1D5RMA1 209 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Gm21394Q497R7 227 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Trav15-1-dv6-1Q5R1D2 117 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Vsig8Q6P3A4 417 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Klhdc1Q80YG3 406 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Olfr195Q8VGQ6 308 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Mrpl51Q9CPY1 128 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Prr19B2RW88 366 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 PhipQ8VDD9 1821 aaKnown RBP12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 D430019H16RikJ3QPM6 83 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Sox15P43267 231 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 C1ql4Q4ZJM9 238 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Gpr35Q9ES90 307 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Fam53aE9PV82 402 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Prss33Q80WM7 277 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Bricd5Q8BV89 174 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Nrn1Q8CFV4 142 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Zc3h3Q8CHP0 950 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Ormdl3Q9CPZ6 153 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Sumo3Q9Z172 110 aa12.18□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Trdv2-1A0A0G2JGB9 116 aa12.17□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Gm42517A0A1Y7VLQ2 374 aa12.17□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Lbhd2G3UW55 114 aa12.17□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Cdkn1bP46414 197 aa12.17□□□□□ -0.46
Pcdha8-201ENSMUST00000194038 Trdv2-2Q5R1A4 116 aa12.17□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms