RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 TollipQ9QZ06 274 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm28285A0A087WQ54 102 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm5819E9PZ96 154 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 P04943 107 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Nudt10P0C027 164 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Nudt11P0C028 164 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Hoxb4P10284 250 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 P18530 117 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Hspb7P35385 169 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 CortP56469 109 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm9733Q1AN91 178 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Lyplal1Q3UFF7 239 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gls2Q571F8 602 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 AtraidQ6PGD0 223 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Klhdc1Q80YG3 406 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Vmn1r62Q8R2C0 300 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr338Q8VGK6 306 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Srd5a2Q99N99 254 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Bpifa5Q9CQX3 270 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Dppa2Q9CWH0 301 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Timm23Q9WTQ8 209 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Ighv7-2A0A0A6YX91 119 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Esp6A8R0U0 136 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm12887B1AVM1 119 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm37988J3QM41 62 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm27021M0QWE2 156 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Degs1O09005 323 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Grcc10O35127 126 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Hyal2O35632 473 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Cldn1O88551 211 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Chrna7P49582 502 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Wfdc9Q3UW41 83 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr328Q5NCD3 310 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr141Q60880 325 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr138Q7TRI7 312 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr193Q7TS43 309 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm9913Q8BQQ2 135 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr860Q8VFF7 317 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr1454Q8VFW2 307 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Etfrf1Q91V16 86 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Eny2Q9JIX0 101 aaKnown RBP7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 NagkQ9QZ08 343 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Trav6d-5A0A075B6B9 112 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Fcrl6A1YIY0 268 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Esp8F7AMQ8 149 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm4791J3QQ14 102 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Fabp9O08716 132 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 P18528 98 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Q504N7 393 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Asphd2Q80VP9 343 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr877Q8VF62 311 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr484Q8VFD3 321 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr1271Q8VG62 305 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr639Q8VGY8 316 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 9130008F23RikQ9D2Z6 181 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Ap5s1Q9D742 170 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 DeddQ9Z1L3 318 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gab2Q9Z1S8 665 aa7.03□□□□□ -1.28
Trim39-201ENSMUST00000042717 Trbv19A0A0B4J1H4 117 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Platr25A0A1Y7VIZ1 466 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gm10037E9PX85 104 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Prss32E9Q409 334 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 P01724 129 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 P04212 136 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Tmem95P0DJF3 176 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Slc2a9Q3T9X0 538 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr1204Q7TR10 309 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr132Q7TRI8 313 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Zc2hc1aQ8BJH1 324 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 GaptQ8CB93 157 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr123Q8VFQ1 309 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr206Q8VGP9 306 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Alkbh7Q9D6Z0 221 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Ppp1r1aQ9ERT9 171 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Ammecr1Q9JHT5 344 aaKnown RBP7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Elovl1Q9JLJ5 279 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Chek1O35280 476 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 P01803 113 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Lynx1P0DP60 116 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Defb2P82020 71 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Fam3dP97805 223 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 MidnQ3TPJ7 465 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 B020031M17RikQ3UT11 173 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr1444Q8VFX2 319 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Hsd17b6Q9R092 317 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Pus1Q9WU56 423 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Fxyd1Q9Z239 92 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gm12728V9GX31 77 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 OtogO55225 2910 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Ighv1-47A0A0A6YY41 117 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gm45871A0A1B0GRI9 540 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Cd209gD3Z5D4 194 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr466E9Q2B9 308 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Thap8E9Q695 213 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gm21974F6W3F3 119 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 PkiaP63248 76 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gfra1P97785 468 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Samd5Q3V1H9 173 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Btf3Q64152 204 aaKnown RBP7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Spcs3Q6ZWQ7 180 aa7.02□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 44.2 ms