Protein–RNA interactions for Protein: O35280

Chek1, Serine/threonine-protein kinase Chk1, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chek1O35280 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Chek1O35280 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
Chek1O35280 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Chek1O35280 Gm25239-201ENSMUST00000174915 86 ntBASIC26.55■■□□□ 1.84
Chek1O35280 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Chek1O35280 Psd-208ENSMUST00000224556 2034 ntBASIC26.34■■□□□ 1.81
Chek1O35280 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Chek1O35280 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Chek1O35280 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Chek1O35280 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Chek1O35280 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Chek1O35280 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Chek1O35280 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Chek1O35280 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Chek1O35280 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Chek1O35280 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Chek1O35280 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Chek1O35280 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.52■■□□□ 1.52
Chek1O35280 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Chek1O35280 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Chek1O35280 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Chek1O35280 Gm15042-201ENSMUST00000120212 883 ntBASIC24.14■■□□□ 1.45
Chek1O35280 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Chek1O35280 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Chek1O35280 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Chek1O35280 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.92■■□□□ 1.42
Chek1O35280 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Chek1O35280 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Chek1O35280 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Chek1O35280 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chek1O35280 Gm15045-201ENSMUST00000117359 883 ntBASIC23.78■■□□□ 1.4
Chek1O35280 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.77■■□□□ 1.4
Chek1O35280 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Chek1O35280 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chek1O35280 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.69■■□□□ 1.38
Chek1O35280 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Chek1O35280 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.67■■□□□ 1.38
Chek1O35280 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.66■■□□□ 1.38
Chek1O35280 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
Chek1O35280 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Chek1O35280 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.59■■□□□ 1.37
Chek1O35280 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
Chek1O35280 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Chek1O35280 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Chek1O35280 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Chek1O35280 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Chek1O35280 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Chek1O35280 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Chek1O35280 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Chek1O35280 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Chek1O35280 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Chek1O35280 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Chek1O35280 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Chek1O35280 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.24■■□□□ 1.31
Chek1O35280 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chek1O35280 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chek1O35280 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
Chek1O35280 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Chek1O35280 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Chek1O35280 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Chek1O35280 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chek1O35280 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Chek1O35280 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Chek1O35280 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chek1O35280 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Chek1O35280 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.8■■□□□ 1.24
Chek1O35280 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Chek1O35280 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Chek1O35280 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Chek1O35280 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Chek1O35280 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Chek1O35280 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Chek1O35280 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chek1O35280 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chek1O35280 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Chek1O35280 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Chek1O35280 Gm24109-201ENSMUST00000175489 103 ntBASIC22.59■■□□□ 1.21
Chek1O35280 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Chek1O35280 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Chek1O35280 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chek1O35280 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Chek1O35280 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Chek1O35280 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.44■■□□□ 1.18
Chek1O35280 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Chek1O35280 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chek1O35280 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Chek1O35280 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Chek1O35280 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Chek1O35280 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Chek1O35280 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Chek1O35280 Gm23366-201ENSMUST00000175022 89 ntBASIC22.3■■□□□ 1.16
Chek1O35280 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Chek1O35280 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.26■■□□□ 1.15
Chek1O35280 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Chek1O35280 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chek1O35280 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chek1O35280 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Chek1O35280 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chek1O35280 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chek1O35280 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 171.6 ms