RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 E7EUB6 86 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 H3BMG7 143 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 DNAL4O96015 105 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 SCGB1A1P11684 91 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 TPT1P13693 172 aaKnown RBP0.98□□□□□ -2.25
GABPB1-209ENST00000559100 FABP4P15090 132 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 DSCR4P56555 118 aaPredicted RBP0.98□□□□□ -2.25
GABPB1-209ENST00000559100 ROMO1P60602 79 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 MRPS36P82909 103 aaKnown RBP0.98□□□□□ -2.25
GABPB1-209ENST00000559100 ALX1Q15699 326 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 CCDC153Q494R4 210 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 C1orf134Q5TEV5 83 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.98□□□□□ -2.25
GABPB1-209ENST00000559100 PHF5AQ7RTV0 110 aaKnown RBP0.98□□□□□ -2.25
GABPB1-209ENST00000559100 TEN1Q86WV5 123 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 OR8I2Q8N0Y5 310 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 BRK1Q8WUW1 75 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 BORCS5Q969J3 196 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 AP1S3Q96PC3 154 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 MCEEQ96PE7 176 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 CALML5Q9NZT1 146 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 SOX21Q9Y651 276 aaPredicted RBP0.98□□□□□ -2.25
GABPB1-209ENST00000559100 PLXNA3P51805 1871 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 GBF1Q92538 1859 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 NUMA1Q14980 2115 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 BCL9O00512 1426 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 MYH7BA7E2Y1 1941 aa0.97□□□□□ -2.25
GABPB1-209ENST00000559100 MDC1Q14676 2089 aaKnown RBP0.97□□□□□ -2.25
GABPB1-209ENST00000559100 IGKV2-40A0A087WW87 121 aaPredicted RBP0.97□□□□□ -2.25
GABPB1-209ENST00000559100 A0A096LPI6 279 aa0.97□□□□□ -2.25
GABPB1-209ENST00000559100 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.97□□□□□ -2.25
GABPB1-209ENST00000559100 IGKV3D-7A0A0C4DH55 119 aa0.97□□□□□ -2.25
GABPB1-209ENST00000559100 IGKV3OR2-268A0A0C4DH90 116 aa0.97□□□□□ -2.25
GABPB1-209ENST00000559100 ZNF736B4DX44 427 aaPredicted RBP0.97□□□□□ -2.25
GABPB1-209ENST00000559100 F8W1H4 67 aa0.97□□□□□ -2.25
GABPB1-209ENST00000559100 M0QZK8 103 aa0.97□□□□□ -2.25
GABPB1-209ENST00000559100 MRPS14O60783 128 aaKnown RBP0.97□□□□□ -2.25
GABPB1-209ENST00000559100 DPM2O94777 84 aa0.97□□□□□ -2.25
GABPB1-209ENST00000559100 IGKV2D-40P01614 121 aaPredicted RBP0.97□□□□□ -2.25
GABPB1-209ENST00000559100 IL9P15248 144 aa0.97□□□□□ -2.25
GABPB1-209ENST00000559100 RPS3P23396 243 aaKnown RBP eCLIP0.97□□□□□ -2.25
GABPB1-209ENST00000559100 GTF2A1P52655 376 aaPredicted RBP0.97□□□□□ -2.25
GABPB1-209ENST00000559100 LSM3P62310 102 aaKnown RBP0.97□□□□□ -2.25
GABPB1-209ENST00000559100 KRTAP6-3Q3LI67 103 aa0.97□□□□□ -2.25
GABPB1-209ENST00000559100 Q8N2B8 174 aa0.97□□□□□ -2.25
GABPB1-209ENST00000559100 Q8N814 137 aa0.97□□□□□ -2.25
GABPB1-209ENST00000559100 MAFIPQ8WZ33 124 aa0.97□□□□□ -2.25
GABPB1-209ENST00000559100 OR4C12Q96R67 309 aa0.97□□□□□ -2.25
GABPB1-209ENST00000559100 CDC42SE1Q9NRR8 79 aa0.97□□□□□ -2.25
GABPB1-209ENST00000559100 GSKIPQ9P0R6 139 aa0.97□□□□□ -2.25
GABPB1-209ENST00000559100 DENND4CQ5VZ89 1909 aa0.97□□□□□ -2.25
GABPB1-209ENST00000559100 ANAPC1Q9H1A4 1944 aa0.97□□□□□ -2.25
GABPB1-209ENST00000559100 FN1P02751 2386 aaKnown RBP0.97□□□□□ -2.25
GABPB1-209ENST00000559100 TRAPPC8Q9Y2L5 1435 aa0.97□□□□□ -2.25
GABPB1-209ENST00000559100 RTL9Q8NET4 1388 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 RP1P56715 2156 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 IGKV3-7A0A075B6H7 116 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 TRAV36DV7A0A075B6V5 113 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 TRAV27A0A087WT01 109 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 A0A087WX48 190 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 LOC107984640A0A0U1RRK4 108 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 LOC105371267A0A1B0GV96 52 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 B4DSR2 109 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 DBIP07108 87 aaKnown RBP0.96□□□□□ -2.26
GABPB1-209ENST00000559100 CXCL8P10145 99 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 SDC4P31431 198 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 SRP9P49458 86 aaKnown RBP0.96□□□□□ -2.26
GABPB1-209ENST00000559100 MAXP61244 160 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 RPS28P62857 69 aaKnown RBP0.96□□□□□ -2.26
GABPB1-209ENST00000559100 SMCO1Q147U7 214 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 OR8B8Q15620 311 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 ARPINQ7Z6K5 226 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 TCTE3Q8IZS6 198 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 OR51A4Q8NGJ6 313 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 OR5AK2Q8NH90 309 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 TMEM138Q9NPI0 162 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 NIT2Q9NQR4 276 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 CBLN4Q9NTU7 201 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 ORMDL1Q9P0S3 153 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 SBF1O95248 1867 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 NUP210LQ5VU65 1888 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 MYO5AQ9Y4I1 1855 aaKnown RBP0.96□□□□□ -2.26
GABPB1-209ENST00000559100 FHAD1B1AJZ9 1412 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 TNS3Q68CZ2 1445 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 RTTNQ86VV8 2226 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 N4BP2Q86UW6 1770 aaPredicted RBP0.96□□□□□ -2.26
GABPB1-209ENST00000559100 VWDEQ8N2E2 1590 aa0.96□□□□□ -2.26
GABPB1-209ENST00000559100 BRWD1Q9NSI6 2320 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 A2MP01023 1474 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 MICAL3Q7RTP6 2002 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 CCDC88CQ9P219 2028 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 NUP98P52948 1817 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 TRBV6-7A0A0A0MS04 114 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 BORCS7-ASMTA0A0B4J1R7 106 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 LOC107984156A0A0G2JMH3 177 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 TRBV27A0A0K0K1C4 114 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 C9orf170A2RU37 121 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 TMEM189A5PLL7 270 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 C5orf67F2Z3F1 127 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 H3BRM9 83 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms