RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 AEBP2Q6ZN18 517 aaPredicted RBP12.19□□□□□ -0.46
GABPB1-209ENST00000559100 POTEDQ86YR6 584 aa11.63□□□□□ -0.55
GABPB1-209ENST00000559100 CHIC1Q5VXU3 224 aa11.37□□□□□ -0.59
GABPB1-209ENST00000559100 SENP3Q9H4L4 574 aaPredicted RBP10.59□□□□□ -0.71
GABPB1-209ENST00000559100 PHF23Q9BUL5 403 aaPredicted RBP10.27□□□□□ -0.77
GABPB1-209ENST00000559100 FOXD1Q16676 465 aa10□□□□□ -0.81
GABPB1-209ENST00000559100 MSH5O43196 834 aa9.83□□□□□ -0.84
GABPB1-209ENST00000559100 CACNB1Q02641 598 aaPredicted RBP9.19□□□□□ -0.94
GABPB1-209ENST00000559100 PIAS4Q8N2W9 510 aaPredicted RBP9.1□□□□□ -0.95
GABPB1-209ENST00000559100 POTEHQ6S545 545 aa8.88□□□□□ -0.99
GABPB1-209ENST00000559100 PPP6R1Q9UPN7 881 aa8.44□□□□□ -1.06
GABPB1-209ENST00000559100 ADRA2BP18089 450 aa8.36□□□□□ -1.07
GABPB1-209ENST00000559100 RNF39Q9H2S5 420 aa8.27□□□□□ -1.09
GABPB1-209ENST00000559100 DMRT2Q9Y5R5 561 aa8.2□□□□□ -1.1
GABPB1-209ENST00000559100 C1QBPQ07021 282 aaKnown RBP8.07□□□□□ -1.12
GABPB1-209ENST00000559100 MAPK8IP2Q13387 824 aaPredicted RBP8.03□□□□□ -1.12
GABPB1-209ENST00000559100 DCAF8L1A6NGE4 600 aa8□□□□□ -1.13
GABPB1-209ENST00000559100 PLSCR2Q9NRY7 297 aa7.89□□□□□ -1.15
GABPB1-209ENST00000559100 PLPPR3Q6T4P5 718 aa7.78□□□□□ -1.16
GABPB1-209ENST00000559100 SP7Q8TDD2 431 aaPredicted RBP7.76□□□□□ -1.17
GABPB1-209ENST00000559100 SCAF1Q9H7N4 1312 aaKnown RBP7.62□□□□□ -1.19
GABPB1-209ENST00000559100 HOXD11P31277 338 aaPredicted RBP7.41□□□□□ -1.22
GABPB1-209ENST00000559100 CHRDL2Q6WN34 429 aa7.38□□□□□ -1.23
GABPB1-209ENST00000559100 DNAJC5BQ9UF47 199 aa7.35□□□□□ -1.23
GABPB1-209ENST00000559100 DSG3P32926 999 aa7.34□□□□□ -1.23
GABPB1-209ENST00000559100 LHX8Q68G74 356 aa7.27□□□□□ -1.25
GABPB1-209ENST00000559100 HAX1O00165 279 aa7.15□□□□□ -1.26
GABPB1-209ENST00000559100 CAPN15O75808 1086 aa7.15□□□□□ -1.26
GABPB1-209ENST00000559100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.11□□□□□ -1.27
GABPB1-209ENST00000559100 SPINK5Q9NQ38 1064 aaPredicted RBP7.09□□□□□ -1.27
GABPB1-209ENST00000559100 RBM42Q9BTD8 480 aaKnown RBP7.05□□□□□ -1.28
GABPB1-209ENST00000559100 RNF216Q9NWF9 866 aaPredicted RBP7.04□□□□□ -1.28
GABPB1-209ENST00000559100 EVX2Q03828 476 aa6.95□□□□□ -1.3
GABPB1-209ENST00000559100 PIP4P2Q8N4L2 257 aa6.94□□□□□ -1.3
GABPB1-209ENST00000559100 POTEMA6NI47 508 aa6.93□□□□□ -1.3
GABPB1-209ENST00000559100 ABCB7O75027 752 aa6.89□□□□□ -1.31
GABPB1-209ENST00000559100 POTEGQ6S5H5 508 aa6.86□□□□□ -1.31
GABPB1-209ENST00000559100 CNKSR2Q8WXI2 1034 aa6.81□□□□□ -1.32
GABPB1-209ENST00000559100 PCDH10Q9P2E7 1040 aa6.81□□□□□ -1.32
GABPB1-209ENST00000559100 U3KPZ7 1027 aaPredicted RBP6.81□□□□□ -1.32
GABPB1-209ENST00000559100 TRHP20396 242 aaPredicted RBP6.75□□□□□ -1.33
GABPB1-209ENST00000559100 GABBR2O75899 941 aa6.73□□□□□ -1.33
GABPB1-209ENST00000559100 FXR2P51116 673 aaKnown RBP eCLIP6.67□□□□□ -1.34
GABPB1-209ENST00000559100 PPP4R3CPQ6ZMV5 832 aa6.67□□□□□ -1.34
GABPB1-209ENST00000559100 ZNF219Q9P2Y4 722 aaPredicted RBP6.66□□□□□ -1.34
GABPB1-209ENST00000559100 AKT1S1Q96B36 256 aa6.62□□□□□ -1.35
GABPB1-209ENST00000559100 POTEIP0CG38 1075 aa6.57□□□□□ -1.36
GABPB1-209ENST00000559100 REM2Q8IYK8 340 aaPredicted RBP6.57□□□□□ -1.36
GABPB1-209ENST00000559100 OTUD5Q96G74 571 aa6.56□□□□□ -1.36
GABPB1-209ENST00000559100 PITPNM1O00562 1244 aa6.54□□□□□ -1.36
GABPB1-209ENST00000559100 C19orf67A6NJJ6 358 aa6.52□□□□□ -1.37
GABPB1-209ENST00000559100 APLP2Q06481 763 aa6.49□□□□□ -1.37
GABPB1-209ENST00000559100 KCNA4P22459 653 aa6.41□□□□□ -1.38
GABPB1-209ENST00000559100 EHMT2Q96KQ7 1210 aa6.41□□□□□ -1.38
GABPB1-209ENST00000559100 LCE2DQ5TA82 110 aaPredicted RBP6.37□□□□□ -1.39
GABPB1-209ENST00000559100 PRKAR2AP13861 404 aaKnown RBP6.35□□□□□ -1.39
GABPB1-209ENST00000559100 POTEB2H3BUK9 544 aa6.33□□□□□ -1.4
GABPB1-209ENST00000559100 DCBLD2Q96PD2 775 aa6.32□□□□□ -1.4
GABPB1-209ENST00000559100 CDAN1Q8IWY9 1227 aa6.31□□□□□ -1.4
GABPB1-209ENST00000559100 MMRN1Q13201 1228 aa6.3□□□□□ -1.4
GABPB1-209ENST00000559100 FAM163AQ96GL9 167 aaPredicted RBP6.29□□□□□ -1.4
GABPB1-209ENST00000559100 POLA2Q14181 598 aa6.26□□□□□ -1.41
GABPB1-209ENST00000559100 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.19□□□□□ -1.42
GABPB1-209ENST00000559100 HNRNPUL2Q1KMD3 747 aaKnown RBP6.19□□□□□ -1.42
GABPB1-209ENST00000559100 SLC4A1APQ9BWU0 796 aaKnown RBP6.19□□□□□ -1.42
GABPB1-209ENST00000559100 SPNS2Q8IVW8 549 aa6.18□□□□□ -1.42
GABPB1-209ENST00000559100 NCBP3Q53F19 620 aaKnown RBP6.17□□□□□ -1.42
GABPB1-209ENST00000559100 CLCN6P51797 869 aa6.16□□□□□ -1.42
GABPB1-209ENST00000559100 OSCARQ8IYS5 282 aa6.15□□□□□ -1.42
GABPB1-209ENST00000559100 SAMD1Q6SPF0 538 aaPredicted RBP6.11□□□□□ -1.43
GABPB1-209ENST00000559100 CD44P16070 742 aaKnown RBP6.09□□□□□ -1.43
GABPB1-209ENST00000559100 CSRNP3Q8WYN3 585 aa6.09□□□□□ -1.43
GABPB1-209ENST00000559100 MAMSTRQ6ZN01 415 aa6.06□□□□□ -1.44
GABPB1-209ENST00000559100 POTEJP0CG39 1038 aa6.04□□□□□ -1.44
GABPB1-209ENST00000559100 CHADLQ6NUI6 762 aa6.04□□□□□ -1.44
GABPB1-209ENST00000559100 CLEC11AQ9Y240 323 aa6.04□□□□□ -1.44
GABPB1-209ENST00000559100 ZBTB12Q9Y330 459 aaPredicted RBP6.04□□□□□ -1.44
GABPB1-209ENST00000559100 NPM3O75607 178 aaKnown RBP6.02□□□□□ -1.45
GABPB1-209ENST00000559100 SLC4A2P04920 1241 aa6□□□□□ -1.45
GABPB1-209ENST00000559100 SCUBE2Q9NQ36 999 aa5.97□□□□□ -1.45
GABPB1-209ENST00000559100 GALR2O43603 387 aaPredicted RBP5.95□□□□□ -1.46
GABPB1-209ENST00000559100 SPDYE1Q8NFV5 336 aaPredicted RBP5.95□□□□□ -1.46
GABPB1-209ENST00000559100 METRNQ9UJH8 293 aa5.93□□□□□ -1.46
GABPB1-209ENST00000559100 PELP1Q8IZL8 1130 aaKnown RBP5.92□□□□□ -1.46
GABPB1-209ENST00000559100 ZNF579Q8NAF0 562 aaKnown RBP5.92□□□□□ -1.46
GABPB1-209ENST00000559100 ZBTB22O15209 634 aa5.86□□□□□ -1.47
GABPB1-209ENST00000559100 ST18O60284 1047 aa5.84□□□□□ -1.47
GABPB1-209ENST00000559100 C7P10643 843 aa5.82□□□□□ -1.48
GABPB1-209ENST00000559100 SLC39A7Q92504 469 aa5.82□□□□□ -1.48
GABPB1-209ENST00000559100 FOXD4L1Q9NU39 408 aa5.81□□□□□ -1.48
GABPB1-209ENST00000559100 ZRANB1Q9UGI0 708 aa5.81□□□□□ -1.48
GABPB1-209ENST00000559100 FARP1Q9Y4F1 1045 aaPredicted RBP5.8□□□□□ -1.48
GABPB1-209ENST00000559100 SPDYE2BA6NHP3 402 aa5.75□□□□□ -1.49
GABPB1-209ENST00000559100 SPDYE6P0CI01 402 aa5.75□□□□□ -1.49
GABPB1-209ENST00000559100 SPDYE2Q495Y8 402 aa5.75□□□□□ -1.49
GABPB1-209ENST00000559100 PRR29P0C7W0 189 aa5.73□□□□□ -1.49
GABPB1-209ENST00000559100 ASTLQ6HA08 431 aaPredicted RBP5.71□□□□□ -1.5
GABPB1-209ENST00000559100 ATMINO43313 823 aaPredicted RBP5.68□□□□□ -1.5
GABPB1-209ENST00000559100 TMEM121BQ9BXQ6 578 aaPredicted RBP5.67□□□□□ -1.5
GABPB1-209ENST00000559100 KRTAP3-3Q9BYR6 98 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms