RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 PPP1R27Q86WC6 154 aa5.39□□□□□ -1.55
NECAP1-208ENST00000545807 OR10J6PQ8NGY7 276 aa5.39□□□□□ -1.55
NECAP1-208ENST00000545807 GPHA2Q96T91 129 aa5.39□□□□□ -1.55
NECAP1-208ENST00000545807 PRADC1Q9BSG0 188 aa5.39□□□□□ -1.55
NECAP1-208ENST00000545807 TRAV24A0A0B4J272 114 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 IGHV1-18A0A0C4DH31 117 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 MBD3L4A6NDZ8 208 aaPredicted RBP5.38□□□□□ -1.55
NECAP1-208ENST00000545807 MBD3L3A6NE82 208 aaPredicted RBP5.38□□□□□ -1.55
NECAP1-208ENST00000545807 MBD3L5A6NJ08 208 aaPredicted RBP5.38□□□□□ -1.55
NECAP1-208ENST00000545807 SPRY3O43610 288 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 COX5AP20674 150 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 PLA2G5P39877 138 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 TMEM219Q86XT9 240 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 FAM169BQ8N8A8 192 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 OR9G1Q8NH87 305 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 MBD3L2Q8NHZ7 208 aaPredicted RBP5.38□□□□□ -1.55
NECAP1-208ENST00000545807 LINC00479Q96M42 142 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 ABCA12Q86UK0 2595 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 SCO2A0A1W2PP80 73 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 GGTLC3B5MD39 225 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 K7ERJ3 54 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 MSMPQ1L6U9 139 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 FAM201AQ5SY85 155 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 TEN1Q86WV5 123 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 MKXQ8IYA7 352 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 RNF125Q96EQ8 232 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 PLPPR2Q96GM1 343 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 RASL11BQ9BPW5 248 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 DCHS2Q6V1P9 2916 aa5.38□□□□□ -1.55
NECAP1-208ENST00000545807 PTPN13Q12923 2485 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 USP9YO00507 2555 aaPredicted RBP5.37□□□□□ -1.55
NECAP1-208ENST00000545807 TRAV4A0A0B4J268 109 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 C16orf97H3BN30 126 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 H3BP45 60 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 GRNP28799 593 aaKnown RBP5.37□□□□□ -1.55
NECAP1-208ENST00000545807 KRTAP27-1Q3LI81 207 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 GDF5OSQ5U4N7 250 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 TREML4Q6UXN2 200 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 SIGLEC15Q6ZMC9 328 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 SSX8Q7RTT4 187 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 WDR86Q86TI4 376 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 DEFB108BQ8NET1 73 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 Q96M66 194 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 CCL21O00585 134 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 SPINK4O60575 86 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 AMTNQ6UX39 209 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 LINC01560Q8TB33 94 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 ZNF331Q9NQX6 463 aaPredicted RBP5.37□□□□□ -1.55
NECAP1-208ENST00000545807 C21orf62Q9NYP8 219 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 CRYBG3Q68DQ2 2970 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 IGHV3OR15-7A0A075B7D8 119 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 UBE2L5PA0A1B0GUS4 154 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 SNCGO76070 127 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 RRN3P1Q2M238 152 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 ZNF718Q3SXZ3 478 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 SBSPONQ8IVN8 264 aa5.37□□□□□ -1.55
NECAP1-208ENST00000545807 BCL6BQ8N143 479 aaPredicted RBP5.37□□□□□ -1.55
NECAP1-208ENST00000545807 TCRBV4S1A1TA0A5B7 111 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 NDUFA7O95182 113 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 IGHV3-13P01766 116 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 MGST1P10620 155 aaKnown RBP5.36□□□□□ -1.55
NECAP1-208ENST00000545807 RTL8BQ17RB0 113 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 Q6P435 159 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 PIFOQ8TCI5 191 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 FBXL15Q9H469 300 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 SLC25A15Q9Y619 301 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 ABCA1O95477 2261 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 MALRD1Q5VYJ5 2156 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 ARHGAP32A7KAX9 2087 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 TEX50A0A1B0GTY4 177 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 OR2H2O95918 312 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 EDN2P20800 178 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 EMP1P54849 157 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 RBM11P57052 281 aaKnown RBP5.36□□□□□ -1.55
NECAP1-208ENST00000545807 SLC38A11Q08AI6 406 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 EDDM3AQ14507 147 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 CDSNQ15517 529 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 Q6ZR03 302 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 NUP35Q8NFH5 326 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 RND1Q92730 232 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 PSENENQ9NZ42 101 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 CHD6Q8TD26 2715 aa5.36□□□□□ -1.55
NECAP1-208ENST00000545807 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.36□□□□□ -1.559e-7■■■■■ 30.3
NECAP1-208ENST00000545807 HCFC1P51610 2035 aa5.35□□□□□ -1.55
NECAP1-208ENST00000545807 NOTCH2Q04721 2471 aa5.35□□□□□ -1.55
NECAP1-208ENST00000545807 PDCD6O75340 191 aa5.35□□□□□ -1.55
NECAP1-208ENST00000545807 IGKV3-15P01624 115 aa5.35□□□□□ -1.55
NECAP1-208ENST00000545807 IGLC6P0CF74 106 aa5.35□□□□□ -1.55
NECAP1-208ENST00000545807 GCSHP23434 173 aa5.35□□□□□ -1.55
NECAP1-208ENST00000545807 DLX6P56179 175 aa5.35□□□□□ -1.55
NECAP1-208ENST00000545807 FAM53AQ6NSI3 398 aaPredicted RBP5.35□□□□□ -1.55
NECAP1-208ENST00000545807 TMEM14EPQ6UXP3 125 aa5.35□□□□□ -1.55
NECAP1-208ENST00000545807 TBC1D26Q86UD7 250 aa5.35□□□□□ -1.55
NECAP1-208ENST00000545807 OR51H1Q8NH63 302 aa5.35□□□□□ -1.55
NECAP1-208ENST00000545807 RTL8AQ9BWD3 113 aa5.35□□□□□ -1.55
NECAP1-208ENST00000545807 KLF12Q9Y4X4 402 aa5.35□□□□□ -1.55
NECAP1-208ENST00000545807 SYNGR2O43760 224 aa5.35□□□□□ -1.55
NECAP1-208ENST00000545807 DUSP14O95147 198 aaKnown RBP5.35□□□□□ -1.55
NECAP1-208ENST00000545807 CSN1S1P47710 185 aa5.35□□□□□ -1.55
NECAP1-208ENST00000545807 CCL8P80075 99 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms