RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 TUSC5Q8IXB3 177 aa8.36□□□□□ -1.07
VPS11-207ENST00000620429 RPRMLQ8N4K4 120 aa8.36□□□□□ -1.07
VPS11-207ENST00000620429 SRSF8Q9BRL6 282 aaKnown RBP8.36□□□□□ -1.07
VPS11-207ENST00000620429 MAP1LC3AQ9H492 121 aa8.36□□□□□ -1.07
VPS11-207ENST00000620429 PLEKHA3Q9HB20 300 aa8.36□□□□□ -1.07
VPS11-207ENST00000620429 TPRP12270 2363 aaKnown RBP8.36□□□□□ -1.07
VPS11-207ENST00000620429 RBP4P02753 201 aa8.36□□□□□ -1.07
VPS11-207ENST00000620429 SMCPP49901 116 aaPredicted RBP8.36□□□□□ -1.07
VPS11-207ENST00000620429 EIF4EBP1Q13541 118 aaPredicted RBP8.36□□□□□ -1.07
VPS11-207ENST00000620429 TMEM126AQ9H061 195 aa8.36□□□□□ -1.07
VPS11-207ENST00000620429 PCNX2A6NKB5 2137 aa8.35□□□□□ -1.07
VPS11-207ENST00000620429 APOHP02749 345 aaPredicted RBP8.35□□□□□ -1.07
VPS11-207ENST00000620429 MPV17P39210 176 aa8.35□□□□□ -1.07
VPS11-207ENST00000620429 ASPHD1Q5U4P2 390 aa8.35□□□□□ -1.07
VPS11-207ENST00000620429 PPP1R35Q8TAP8 253 aa8.35□□□□□ -1.07
VPS11-207ENST00000620429 FCN3O75636 299 aa8.35□□□□□ -1.07
VPS11-207ENST00000620429 PPIFP30405 207 aaKnown RBP8.35□□□□□ -1.07
VPS11-207ENST00000620429 BRWD1-AS2P59051 145 aa8.35□□□□□ -1.07
VPS11-207ENST00000620429 TAL2Q16559 108 aa8.35□□□□□ -1.07
VPS11-207ENST00000620429 C12orf74Q32Q52 190 aa8.35□□□□□ -1.07
VPS11-207ENST00000620429 Q6Q795 121 aa8.35□□□□□ -1.07
VPS11-207ENST00000620429 RPEQ96AT9 228 aa8.35□□□□□ -1.07
VPS11-207ENST00000620429 SLC25A33Q9BSK2 321 aa8.35□□□□□ -1.07
VPS11-207ENST00000620429 GFRA4Q9GZZ7 299 aa8.35□□□□□ -1.07
VPS11-207ENST00000620429 TCF19Q9Y242 345 aa8.35□□□□□ -1.07
VPS11-207ENST00000620429 TIMM8BQ9Y5J9 83 aaPredicted RBP8.35□□□□□ -1.07
VPS11-207ENST00000620429 A0A096LNJ9 63 aa8.34□□□□□ -1.07
VPS11-207ENST00000620429 COL8A2P25067 703 aa8.34□□□□□ -1.07
VPS11-207ENST00000620429 LINC00205P59089 165 aa8.34□□□□□ -1.07
VPS11-207ENST00000620429 CACNG7P62955 275 aa8.34□□□□□ -1.07
VPS11-207ENST00000620429 ATP1A1-AS1Q5TC04 95 aa8.34□□□□□ -1.07
VPS11-207ENST00000620429 OR8A1Q8NGG7 326 aa8.34□□□□□ -1.07
VPS11-207ENST00000620429 PRRC2CQ9Y520 2896 aaKnown RBP8.34□□□□□ -1.07
VPS11-207ENST00000620429 URB1O60287 2271 aaKnown RBP8.34□□□□□ -1.07
VPS11-207ENST00000620429 ZFHX4Q86UP3 3567 aa8.34□□□□□ -1.07
VPS11-207ENST00000620429 IGKV3D-15A0A087WSY6 115 aa8.34□□□□□ -1.07
VPS11-207ENST00000620429 CHEK1O14757 476 aa8.34□□□□□ -1.07
VPS11-207ENST00000620429 CARD19Q96LW7 228 aa8.34□□□□□ -1.07
VPS11-207ENST00000620429 RTL8AQ9BWD3 113 aa8.34□□□□□ -1.07
VPS11-207ENST00000620429 C12orf77C9JDV5 145 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 ZNF688P0C7X2 276 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 IFITM1P13164 125 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 GAGE2BQ13066 116 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 ANXA2RQ3ZCQ2 193 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 GAGE2EQ4V326 116 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 PRR30Q53SZ7 412 aaPredicted RBP8.33□□□□□ -1.08
VPS11-207ENST00000620429 WDR86Q86TI4 376 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 Q8IYB0 196 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 PRSS22Q9GZN4 317 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 RPP21Q9H633 154 aaKnown RBP8.33□□□□□ -1.08
VPS11-207ENST00000620429 GAGE2DQ9UEU5 116 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 CFAP47Q6ZTR5 3102 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 SHISA9B4DS77 424 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 PRRG2O14669 202 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 MT-CO3P00414 261 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 LTAP01374 205 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 CSN3P07498 182 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 HLA-DRB4P13762 266 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 RBPMS2Q6ZRY4 209 aaKnown RBP8.33□□□□□ -1.08
VPS11-207ENST00000620429 TEN1Q86WV5 123 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 COQ2Q96H96 371 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 LINC00479Q96M42 142 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 HLA-DRB4X5D2U9 266 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 HCFC1P51610 2035 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 MED13Q9UHV7 2174 aa8.33□□□□□ -1.08
VPS11-207ENST00000620429 SPENQ96T58 3664 aaKnown RBP8.33□□□□□ -1.08
VPS11-207ENST00000620429 TRBV25-1A0A075B6N4 114 aa8.32□□□□□ -1.08
VPS11-207ENST00000620429 TMEM30CPA0ZSE6 113 aa8.32□□□□□ -1.08
VPS11-207ENST00000620429 B9A039 149 aa8.32□□□□□ -1.08
VPS11-207ENST00000620429 ACTL6BO94805 426 aa8.32□□□□□ -1.08
VPS11-207ENST00000620429 MAGEA5P43359 124 aa8.32□□□□□ -1.08
VPS11-207ENST00000620429 ZNF414Q96IQ9 312 aa8.32□□□□□ -1.08
VPS11-207ENST00000620429 RITA1Q96K30 269 aa8.32□□□□□ -1.08
VPS11-207ENST00000620429 NABP2Q9BQ15 211 aa8.32□□□□□ -1.08
VPS11-207ENST00000620429 AMMECR1Q9Y4X0 333 aaPredicted RBP8.32□□□□□ -1.08
VPS11-207ENST00000620429 A4D1N5 150 aa8.32□□□□□ -1.08
VPS11-207ENST00000620429 LINC00473A8K010 186 aa8.32□□□□□ -1.08
VPS11-207ENST00000620429 HAX1O00165 279 aa8.32□□□□□ -1.08
VPS11-207ENST00000620429 PSPNO60542 156 aa8.32□□□□□ -1.08
VPS11-207ENST00000620429 GRPP07492 148 aa8.32□□□□□ -1.08
VPS11-207ENST00000620429 TCTAP57738 103 aa8.32□□□□□ -1.08
VPS11-207ENST00000620429 TTC32Q5I0X7 151 aa8.32□□□□□ -1.08
VPS11-207ENST00000620429 HES3Q5TGS1 186 aa8.32□□□□□ -1.08
VPS11-207ENST00000620429 RAB9BQ9NP90 201 aa8.32□□□□□ -1.08
VPS11-207ENST00000620429 IGHV3-43A0A0B4J1X8 118 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 IGHV3-43DP0DP04 118 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 OR1C1Q15619 314 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 TMEM78Q5T7P6 136 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 PRSS3P2Q8NHM4 247 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 RND1Q92730 232 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 DLX4Q92988 240 aaPredicted RBP8.31□□□□□ -1.08
VPS11-207ENST00000620429 HSD17B10Q99714 261 aaKnown RBP8.31□□□□□ -1.08
VPS11-207ENST00000620429 TRBV20-1A0A075B6N2 111 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 SRRM4A7MD48 611 aaKnown RBP8.31□□□□□ -1.08
VPS11-207ENST00000620429 DEFB108AA8MXU0 73 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 PEX7O00628 323 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 NDUFS7O75251 213 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 SCGB2A1O75556 95 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 ZNF137PP52743 207 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 GATD1Q8NB37 220 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms