RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 EFCAB10A6NFE3 127 aa2.5□□□□□ -2.01
SMC5-203ENST00000475540 K7ERJ3 54 aa2.5□□□□□ -2.01
SMC5-203ENST00000475540 COX4I1P13073 169 aa2.5□□□□□ -2.01
SMC5-203ENST00000475540 ESRGQ1W209 222 aa2.5□□□□□ -2.01
SMC5-203ENST00000475540 LINC00305Q7Z4B0 112 aa2.5□□□□□ -2.01
SMC5-203ENST00000475540 LRRC28Q86X40 367 aaPredicted RBP2.5□□□□□ -2.01
SMC5-203ENST00000475540 TCTE3Q8IZS6 198 aa2.5□□□□□ -2.01
SMC5-203ENST00000475540 PFDN5Q99471 154 aa2.5□□□□□ -2.01
SMC5-203ENST00000475540 HEATR5AQ86XA9 2040 aa2.5□□□□□ -2.01
SMC5-203ENST00000475540 CPAMD8Q8IZJ3 1885 aa2.5□□□□□ -2.01
SMC5-203ENST00000475540 LOC107984640A0A0U1RRK4 108 aa2.49□□□□□ -2.01
SMC5-203ENST00000475540 C9JAW5 83 aa2.49□□□□□ -2.01
SMC5-203ENST00000475540 PGLYRP1O75594 196 aaPredicted RBP2.49□□□□□ -2.01
SMC5-203ENST00000475540 TNFSF15O95150 251 aa2.49□□□□□ -2.01
SMC5-203ENST00000475540 OR2H2O95918 312 aa2.49□□□□□ -2.01
SMC5-203ENST00000475540 BAALC-AS2P0C853 105 aa2.49□□□□□ -2.01
SMC5-203ENST00000475540 ZNF705BP0CI00 300 aaPredicted RBP2.49□□□□□ -2.01
SMC5-203ENST00000475540 C4orf22Q6V702 233 aa2.49□□□□□ -2.01
SMC5-203ENST00000475540 OR8J3Q8NGG0 315 aa2.49□□□□□ -2.01
SMC5-203ENST00000475540 MCEEQ96PE7 176 aa2.49□□□□□ -2.01
SMC5-203ENST00000475540 HIGD1AQ9Y241 93 aa2.49□□□□□ -2.01
SMC5-203ENST00000475540 SMARCA4P51532 1647 aa2.49□□□□□ -2.01
SMC5-203ENST00000475540 XIRP1Q702N8 1843 aaKnown RBP2.49□□□□□ -2.01
SMC5-203ENST00000475540 SBF1O95248 1867 aa2.48□□□□□ -2.01
SMC5-203ENST00000475540 NUP98P52948 1817 aa2.48□□□□□ -2.01
SMC5-203ENST00000475540 IGKV1D-42A0A075B6H8 117 aa2.48□□□□□ -2.01
SMC5-203ENST00000475540 IGLV3-9A0A075B6K5 115 aa2.48□□□□□ -2.01
SMC5-203ENST00000475540 RER1O15258 196 aa2.48□□□□□ -2.01
SMC5-203ENST00000475540 UBBP0CG47 229 aa2.48□□□□□ -2.01
SMC5-203ENST00000475540 SDC4P31431 198 aa2.48□□□□□ -2.01
SMC5-203ENST00000475540 PATE2Q6UY27 113 aa2.48□□□□□ -2.01
SMC5-203ENST00000475540 OR51A4Q8NGJ6 313 aa2.48□□□□□ -2.01
SMC5-203ENST00000475540 OR4K15Q8NH41 348 aa2.48□□□□□ -2.01
SMC5-203ENST00000475540 TPT1P8Q9HAU6 139 aa2.48□□□□□ -2.01
SMC5-203ENST00000475540 C14orf132Q9NPU4 83 aa2.48□□□□□ -2.01
SMC5-203ENST00000475540 RTL9Q8NET4 1388 aa2.48□□□□□ -2.01
SMC5-203ENST00000475540 NISCHQ9Y2I1 1504 aa2.47□□□□□ -2.01
SMC5-203ENST00000475540 TRAV13-1A0A0B4J241 112 aa2.47□□□□□ -2.01
SMC5-203ENST00000475540 SDHAF1A6NFY7 115 aa2.47□□□□□ -2.01
SMC5-203ENST00000475540 IBA57-AS1B1ANH7 110 aa2.47□□□□□ -2.01
SMC5-203ENST00000475540 LY6LH3BQJ8 138 aa2.47□□□□□ -2.01
SMC5-203ENST00000475540 PROSCO94903 275 aa2.47□□□□□ -2.01
SMC5-203ENST00000475540 MGST1P10620 155 aaKnown RBP2.47□□□□□ -2.01
SMC5-203ENST00000475540 KLRD1Q13241 179 aa2.47□□□□□ -2.01
SMC5-203ENST00000475540 OR4B1Q8NGF8 309 aa2.47□□□□□ -2.01
SMC5-203ENST00000475540 ZC2HC1AQ96GY0 325 aa2.47□□□□□ -2.01
SMC5-203ENST00000475540 CXCL16Q9H2A7 254 aa2.47□□□□□ -2.01
SMC5-203ENST00000475540 ANKRD31Q8N7Z5 1873 aa2.47□□□□□ -2.01
SMC5-203ENST00000475540 EML6Q6ZMW3 1958 aa2.47□□□□□ -2.01
SMC5-203ENST00000475540 TRBV27A0A0K0K1C4 114 aa2.46□□□□□ -2.02
SMC5-203ENST00000475540 ZNF705FA8MVS1 300 aaPredicted RBP2.46□□□□□ -2.02
SMC5-203ENST00000475540 MT-ND6P03923 174 aa2.46□□□□□ -2.02
SMC5-203ENST00000475540 MPC1LP0DKB6 136 aa2.46□□□□□ -2.02
SMC5-203ENST00000475540 MIFP14174 115 aa2.46□□□□□ -2.02
SMC5-203ENST00000475540 C7orf65Q6ZTY9 151 aa2.46□□□□□ -2.02
SMC5-203ENST00000475540 LINC00301Q8NCQ3 95 aa2.46□□□□□ -2.02
SMC5-203ENST00000475540 OR5H6Q8NGV6 325 aa2.46□□□□□ -2.02
SMC5-203ENST00000475540 ZNF418Q8TF45 676 aaPredicted RBP2.46□□□□□ -2.02
SMC5-203ENST00000475540 MAGOHBQ96A72 148 aaKnown RBP2.46□□□□□ -2.02
SMC5-203ENST00000475540 PRELID3AQ96N28 172 aa2.46□□□□□ -2.02
SMC5-203ENST00000475540 SLC50A1Q9BRV3 221 aa2.46□□□□□ -2.02
SMC5-203ENST00000475540 TIMM21Q9BVV7 248 aa2.46□□□□□ -2.02
SMC5-203ENST00000475540 CBLN4Q9NTU7 201 aa2.46□□□□□ -2.02
SMC5-203ENST00000475540 LHFPL6Q9Y693 200 aa2.46□□□□□ -2.02
SMC5-203ENST00000475540 LY96Q9Y6Y9 160 aa2.46□□□□□ -2.02
SMC5-203ENST00000475540 N4BP2Q86UW6 1770 aaPredicted RBP2.46□□□□□ -2.02
SMC5-203ENST00000475540 ERCC6Q03468 1493 aa2.45□□□□□ -2.02
SMC5-203ENST00000475540 RTEL1-TNFRSF6BF6WH68 1400 aa2.45□□□□□ -2.02
SMC5-203ENST00000475540 SOGA1O94964 1423 aa2.45□□□□□ -2.02
SMC5-203ENST00000475540 MEIKINA0A087WXM9 373 aa2.45□□□□□ -2.02
SMC5-203ENST00000475540 TRAV3A0A0B4J244 114 aa2.45□□□□□ -2.02
SMC5-203ENST00000475540 TRAV1-1A0A0B4J248 108 aa2.45□□□□□ -2.02
SMC5-203ENST00000475540 A0A0G2JQZ4 141 aa2.45□□□□□ -2.02
SMC5-203ENST00000475540 H3BMG7 143 aa2.45□□□□□ -2.02
SMC5-203ENST00000475540 NDUFA2O43678 99 aa2.45□□□□□ -2.02
SMC5-203ENST00000475540 OR1I1O60431 355 aa2.45□□□□□ -2.02
SMC5-203ENST00000475540 RPL22P35268 128 aaKnown RBP2.45□□□□□ -2.02
SMC5-203ENST00000475540 TEX29Q8N6K0 151 aa2.45□□□□□ -2.02
SMC5-203ENST00000475540 FAM216BQ8N7L0 139 aa2.45□□□□□ -2.02
SMC5-203ENST00000475540 OR5A2Q8NGI9 324 aa2.45□□□□□ -2.02
SMC5-203ENST00000475540 AP1S3Q96PC3 154 aa2.45□□□□□ -2.02
SMC5-203ENST00000475540 RETNLBQ9BQ08 111 aa2.45□□□□□ -2.02
SMC5-203ENST00000475540 CST9LQ9H4G1 147 aa2.45□□□□□ -2.02
SMC5-203ENST00000475540 TCOF1Q13428 1488 aaKnown RBP2.45□□□□□ -2.02
SMC5-203ENST00000475540 TRGV4A0A0C4DH28 118 aa2.44□□□□□ -2.02
SMC5-203ENST00000475540 A0A1B0GW64 132 aa2.44□□□□□ -2.02
SMC5-203ENST00000475540 C17orf112F2Z3M2 114 aa2.44□□□□□ -2.02
SMC5-203ENST00000475540 J3QKU1 62 aa2.44□□□□□ -2.02
SMC5-203ENST00000475540 PAEPP09466 180 aa2.44□□□□□ -2.02
SMC5-203ENST00000475540 EVI2AP22794 236 aa2.44□□□□□ -2.02
SMC5-203ENST00000475540 ELOBQ15370 118 aa2.44□□□□□ -2.02
SMC5-203ENST00000475540 ZNF181Q2M3W8 571 aa2.44□□□□□ -2.02
SMC5-203ENST00000475540 TMEM155Q4W5P6 130 aa2.44□□□□□ -2.02
SMC5-203ENST00000475540 Q5XG85 94 aa2.44□□□□□ -2.02
SMC5-203ENST00000475540 BRK1Q8WUW1 75 aa2.44□□□□□ -2.02
SMC5-203ENST00000475540 CHCHD1Q96BP2 118 aaKnown RBP2.44□□□□□ -2.02
SMC5-203ENST00000475540 ERCC6L2Q5T890 1561 aa2.44□□□□□ -2.02
SMC5-203ENST00000475540 ADAMTS7Q9UKP4 1686 aa2.44□□□□□ -2.02
SMC5-203ENST00000475540 NCOA3Q9Y6Q9 1424 aa2.43□□□□□ -2.02
SMC5-203ENST00000475540 LYRM1O43325 122 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms