RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 2810408A11RikQ6NSU2 435 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Tmprss3Q8K1T0 453 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Nup37Q9CWU9 326 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Dmxl2Q8BPN8 3032 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 Trav18A0A075B656 109 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 Trbv12-2A0A0B4J1H1 124 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 Gm45844A0A1B0GRQ2 137 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 Arl16B1ATY8 173 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 Meox1P32442 253 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 Id3P41133 119 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 A230072I06RikQ3UUJ8 172 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 Psmb6Q60692 238 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 Wipi1Q8R3E3 446 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 Sfxn3Q91V61 321 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 Hsf4Q9R0L1 492 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 Cep295Q8BQ48 2412 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 Mpig6bD7PDD4 242 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 Q3UZV7 1028 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 BC147527Q3V185 167 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 Pitpnc1Q8K4R4 332 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr338Q8VGK6 306 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 Aifm1Q9Z0X1 612 aa13.76□□□□□ -0.21
Shh-201ENSMUST00000002708 A0A1L1SR50 188 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 1700025C18RikA2A580 89 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 P01655 112 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 KrasP32883 189 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 Ube2g2P60605 165 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 Cnep1r1Q3UJ81 125 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 Hand1Q64279 216 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 Tgfbr1Q64729 503 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 Aadacl4Q8BM81 407 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr530Q8VFE8 307 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 NgbQ9ER97 151 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 Cacna1hO88427 2365 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 Gm12666A2AMD0 254 aaKnown RBP13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 Efna2P52801 209 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 Serf2P84102 59 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 Rnase11Q5GAM9 192 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 Clec4a1Q80UI7 245 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr484Q8VFD3 321 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 Tm2d1Q99MB3 208 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 St6galnac3Q9WUV2 305 aa13.75□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr588-ps1A0A1B0GSZ2 313 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 C1qtnf9Q4ZJN1 333 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr1350Q8VF34 308 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 Ythdf2Q91YT7 579 aaKnown RBP13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 GmppaQ922H4 420 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 Nkx6-1Q99MA9 365 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 Mpv17lQ99MS3 194 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 Sval2Q99N75 144 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 Tmem126bQ9D1R1 230 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 Akap9Q70FJ1 3797 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 Gm45800A0A1B0GT24 152 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr1328B1ARV2 313 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 Tcf21O35437 179 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 P01659 112 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 PpyP10601 100 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 EnsaP60840 121 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 Q504N7 393 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 Tox3Q80W03 575 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr473Q8VG44 310 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 Bcl2l10Q9Z0F3 191 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 Zfhx3Q61329 3726 aa13.74□□□□□ -0.21
Shh-201ENSMUST00000002708 3110021N24RikJ3QMN2 152 aa13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 Sftpa1P35242 248 aa13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 AesP63002 197 aa13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 HykkQ5U5V2 376 aa13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 Poldip2Q91VA6 368 aa13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 Csmd1Q923L3 3564 aa13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr282A1L1B4 308 aa13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 9130204L05RikG3UWB8 92 aa13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 Ca11O70354 328 aa13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 Lin7cO88952 197 aaKnown RBP13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 Iglc2P01844 104 aa13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 H3f3cP02301 136 aa13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 Prss2P07146 246 aa13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 EtdQ80SW5 59 aa13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 RfxapQ8VCG9 231 aa13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 Tmbim7Q9D592 302 aa13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 Cyb5r3Q9DCN2 301 aaKnown RBP13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 Vmn1r54Q9EPB8 315 aa13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 Vmn1r46Q9EQ45 309 aa13.73□□□□□ -0.21
Shh-201ENSMUST00000002708 Ighv5-4A0A075B5P9 117 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 C2cd4aE9Q861 334 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Gm21834J3QN05 151 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr906K7N5P3 311 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Wdr1O88342 606 aaKnown RBP13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Pet117P0DJF2 80 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Mpv17P19258 176 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Hist1h1eP43274 219 aaKnown RBP13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Sssca1P56873 199 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Pfn1P62962 140 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Rbp2Q08652 134 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Gp49aQ61450 303 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Cdkn2aQ64364 169 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr987Q7TRA2 309 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Ifna13Q80SU4 189 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Zfp799Q8BHK4 648 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Neil3Q8K203 606 aaKnown RBP13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Vmn1r47Q9EQ51 310 aa13.72□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms