RNA–Protein interactions for RNA: snR62

snR62, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR62, Length 100 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR62	snR62	IMD2	P38697	523 aa	Known RBP	0.4	□□□□□ -2.35
snR62	snR62	PPE1	P38796	400 aa		0.4	□□□□□ -2.35
snR62	snR62	IMD3	P50095	523 aa	Known RBP	0.4	□□□□□ -2.35
snR62	snR62	RBG2	P53295	368 aa	Known RBP	0.4	□□□□□ -2.35
snR62	snR62	PCL8	Q08966	492 aa		0.4	□□□□□ -2.35
snR62	snR62	SEC18	P18759	758 aa	Known RBP	0.39	□□□□□ -2.35
snR62	snR62	SRO77	P38163	1010 aa		0.39	□□□□□ -2.35
snR62	snR62	YJL070C	P40361	888 aa		0.39	□□□□□ -2.35
snR62	snR62	UBP6	P43593	499 aa	Known RBP	0.39	□□□□□ -2.35
snR62	snR62	SAP4	P53036	818 aa		0.39	□□□□□ -2.35
snR62	snR62	EFR3	Q03653	782 aa	Known RBP	0.39	□□□□□ -2.35
snR62	snR62	ECM22	Q05958	814 aa	Predicted RBP	0.39	□□□□□ -2.35
snR62	snR62	UBX5	Q06682	500 aa		0.39	□□□□□ -2.35
snR62	snR62	PFA4	Q12006	378 aa		0.39	□□□□□ -2.35
snR62	snR62	PNO1	Q99216	274 aa	Known RBP	0.39	□□□□□ -2.35
snR62	snR62	ILS1	P09436	1072 aa	Known RBP	0.38	□□□□□ -2.35
snR62	snR62	PRO3	P32263	286 aa	Known RBP	0.38	□□□□□ -2.35
snR62	snR62	BRN1	P38170	754 aa		0.38	□□□□□ -2.35
snR62	snR62	TMN3	P40071	706 aa		0.38	□□□□□ -2.35
snR62	snR62	CIN1	P40987	1014 aa		0.38	□□□□□ -2.35
snR62	snR62	CUL3	P53202	744 aa		0.38	□□□□□ -2.35
snR62	snR62	ATP25	Q03153	612 aa		0.38	□□□□□ -2.35
snR62	snR62	RRP15	Q06511	250 aa	Predicted RBP	0.38	□□□□□ -2.35
snR62	snR62	CYK3	Q07533	885 aa		0.38	□□□□□ -2.35
snR62	snR62	PMS1	P14242	873 aa		0.37	□□□□□ -2.35
snR62	snR62	MAK32	P23060	363 aa		0.37	□□□□□ -2.35
snR62	snR62	CNA1	P23287	553 aa		0.37	□□□□□ -2.35
snR62	snR62	KIN82	P25341	720 aa		0.37	□□□□□ -2.35
snR62	snR62	GSH1	P32477	678 aa		0.37	□□□□□ -2.35
snR62	snR62	SLD2	P34252	453 aa		0.37	□□□□□ -2.35
snR62	snR62	APN2	P38207	520 aa		0.37	□□□□□ -2.35
snR62	snR62	PRE5	P40302	234 aa	Known RBP	0.37	□□□□□ -2.35
snR62	snR62	BIT61	P47041	543 aa		0.37	□□□□□ -2.35
snR62	snR62	NPY1	P53164	384 aa		0.37	□□□□□ -2.35
snR62	snR62	CWC24	P53769	259 aa		0.37	□□□□□ -2.35
snR62	snR62	RPS15	Q01855	142 aa	Known RBP	0.37	□□□□□ -2.35
snR62	snR62	RNY1	Q02933	434 aa	Known RBP	0.37	□□□□□ -2.35
snR62	snR62	ISA1	Q07821	250 aa	Predicted RBP	0.37	□□□□□ -2.35
snR62	snR62	TGS1	Q12052	315 aa		0.37	□□□□□ -2.35
snR62	snR62	TAH18	Q12181	623 aa		0.37	□□□□□ -2.35
snR62	snR62	AHA1	Q12449	350 aa	Known RBP	0.37	□□□□□ -2.35
snR62	snR62	RRI1	Q12468	440 aa		0.37	□□□□□ -2.35
snR62	snR62	YOR131C	Q12486	218 aa		0.37	□□□□□ -2.35
snR62	snR62	RLF2	Q12495	606 aa		0.37	□□□□□ -2.35
snR62	snR62	SOD1	P00445	154 aa	Known RBP	0.36	□□□□□ -2.35
snR62	snR62	NAT1	P12945	854 aa	Known RBP	0.36	□□□□□ -2.35
snR62	snR62	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	0.36	□□□□□ -2.35	not detected
snR62	snR62	YPT7	P32939	208 aa		0.36	□□□□□ -2.35
snR62	snR62	YPT10	P38146	199 aa		0.36	□□□□□ -2.35
snR62	snR62	FTH1	P38310	465 aa		0.36	□□□□□ -2.35
snR62	snR62	QRI7	P43122	407 aa		0.36	□□□□□ -2.35
snR62	snR62	YPI1	P43587	155 aa		0.36	□□□□□ -2.35
snR62	snR62	SET2	P46995	733 aa	Known RBP	0.36	□□□□□ -2.35
snR62	snR62	UTP8	P53276	713 aa	Known RBP	0.36	□□□□□ -2.35
snR62	snR62	GET3	Q12154	354 aa	Known RBP	0.36	□□□□□ -2.35
snR62	snR62	TOM70	P07213	617 aa	Known RBP	0.35	□□□□□ -2.35
snR62	snR62	BUD14	P27637	709 aa		0.35	□□□□□ -2.35
snR62	snR62	YKR051W	P36142	418 aa		0.35	□□□□□ -2.35
snR62	snR62	BOR1	P53838	576 aa		0.35	□□□□□ -2.35
snR62	snR62	YNL144C	P53907	740 aa		0.35	□□□□□ -2.35
snR62	snR62	ARP4	P80428	489 aa		0.35	□□□□□ -2.35
snR62	snR62	CEF1	Q03654	590 aa	Predicted RBP	0.35	□□□□□ -2.35
snR62	snR62	PDA1	P16387	420 aa	Known RBP	0.34	□□□□□ -2.36
snR62	snR62	PCL6	P40038	420 aa		0.34	□□□□□ -2.36
snR62	snR62	SMK1	P41808	388 aa		0.34	□□□□□ -2.36
snR62	snR62	GSM1	P42950	618 aa		0.34	□□□□□ -2.36
snR62	snR62	ALG2	P43636	503 aa		0.34	□□□□□ -2.36
snR62	snR62	PCL10	P53124	433 aa		0.34	□□□□□ -2.36
snR62	snR62	SVF1	Q05515	481 aa		0.34	□□□□□ -2.36
snR62	snR62	FMP25	Q08023	583 aa		0.34	□□□□□ -2.36
snR62	snR62	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	0.34	□□□□□ -2.36	not detected
snR62	snR62	MNN2	P38069	597 aa		0.33	□□□□□ -2.36
snR62	snR62	YGR054W	P53235	642 aa	Known RBP	0.33	□□□□□ -2.36
snR62	snR62	YPS7	Q06325	596 aa		0.33	□□□□□ -2.36
snR62	snR62	SPO75	Q07798	868 aa		0.33	□□□□□ -2.36
snR62	snR62	APL5	Q08951	932 aa	Known RBP	0.33	□□□□□ -2.36
snR62	snR62	YLL056C	Q12177	298 aa		0.33	□□□□□ -2.36
snR62	snR62	RPS2	P25443	254 aa	Known RBP	0.32	□□□□□ -2.36
snR62	snR62	YKR018C	P36114	725 aa		0.32	□□□□□ -2.36
snR62	snR62	MAL11	P53048	616 aa		0.32	□□□□□ -2.36
snR62	snR62	BRE5	P53741	515 aa	Known RBP	0.32	□□□□□ -2.36
snR62	snR62	YNL058C	P53947	316 aa		0.32	□□□□□ -2.36
snR62	snR62	CRT10	Q08226	957 aa		0.32	□□□□□ -2.36
snR62	snR62	PPT2	Q12036	173 aa		0.32	□□□□□ -2.36
snR62	snR62	FRS1	P15624	595 aa	Known RBP	0.31	□□□□□ -2.36
snR62	snR62	NIC96	P34077	839 aa		0.31	□□□□□ -2.36
snR62	snR62	CCL1	P37366	393 aa		0.31	□□□□□ -2.36
snR62	snR62	RAD26	P40352	1085 aa		0.31	□□□□□ -2.36
snR62	snR62	YJR061W	P40355	935 aa		0.31	□□□□□ -2.36
snR62	snR62	HUL4	P40985	892 aa		0.31	□□□□□ -2.36
snR62	snR62	TIM50	Q02776	476 aa		0.31	□□□□□ -2.36
snR62	snR62	VBA4	Q04602	768 aa	Known RBP	0.31	□□□□□ -2.36
snR62	snR62	VHS3	Q08438	674 aa		0.31	□□□□□ -2.36
snR62	snR62	YOR389W	Q08912	624 aa		0.31	□□□□□ -2.36
snR62	snR62	HNM1	P19807	563 aa		0.3	□□□□□ -2.36
snR62	snR62	SPF1	P39986	1215 aa	Known RBP	0.3	□□□□□ -2.36
snR62	snR62	ASG1	P40467	964 aa		0.3	□□□□□ -2.36
snR62	snR62	PSP1	P50896	841 aa	Known RBP	0.3	□□□□□ -2.36
snR62	snR62	YGL242C	P53066	181 aa		0.3	□□□□□ -2.36
snR62	snR62	ARA2	Q04212	335 aa		0.3	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms