RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 CEF1Q03654 590 aaPredicted RBP2.13□□□□□ -2.07
snR55snR55 COG8Q04632 607 aa2.13□□□□□ -2.07
snR55snR55 TPO3Q06451 622 aa2.13□□□□□ -2.07
snR55snR55 MRN1Q08925 612 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
snR55snR55 GIN4Q12263 1142 aa2.13□□□□□ -2.07
snR55snR55 PHO2P07269 559 aa2.12□□□□□ -2.07
snR55snR55 ACO1P19414 778 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
snR55snR55 SSD1P24276 1250 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
snR55snR55 DED81P38707 554 aaKnown RBP2.12□□□□□ -2.07
snR55snR55 DUN1P39009 513 aa2.12□□□□□ -2.07
snR55snR55 HLR1Q04429 423 aa2.12□□□□□ -2.07
snR55snR55 HRD3Q05787 833 aa2.12□□□□□ -2.07
snR55snR55 SFL1P20134 766 aa2.11□□□□□ -2.07
snR55snR55 AIM17P23180 465 aaKnown RBP2.11□□□□□ -2.07
snR55snR55 SRP40P32583 406 aaPredicted RBP2.11□□□□□ -2.07
snR55snR55 MAL31P38156 614 aa2.11□□□□□ -2.07
snR55snR55 GND1P38720 489 aaKnown RBP2.11□□□□□ -2.07
snR55snR55 YIL152WP40455 235 aa2.11□□□□□ -2.07
snR55snR55 WAR1Q03631 944 aa2.11□□□□□ -2.07
snR55snR55 USA1Q03714 838 aa2.11□□□□□ -2.07
snR55snR55 SWI6P09959 803 aa2.1□□□□□ -2.07
snR55snR55 YCR043CP25361 127 aa2.1□□□□□ -2.07
snR55snR55 MSH2P25847 964 aa2.1□□□□□ -2.07
snR55snR55 YOX1P34161 385 aa2.1□□□□□ -2.07
snR55snR55 YKR075CP36155 307 aa2.1□□□□□ -2.07
snR55snR55 BRN1P38170 754 aa2.1□□□□□ -2.07
snR55snR55 IRC7P43623 340 aa2.1□□□□□ -2.07
snR55snR55 YPL071CQ02864 156 aa2.1□□□□□ -2.07
snR55snR55 GFD1Q04839 188 aaKnown RBP2.1□□□□□ -2.07
snR55snR55 ARR3Q06598 404 aa2.1□□□□□ -2.07
snR55snR55 AIM44Q99299 758 aa2.1□□□□□ -2.07
snR55snR55 LOT5P34234 306 aa2.09□□□□□ -2.07
snR55snR55 CCL1P37366 393 aa2.09□□□□□ -2.07
snR55snR55 EHT1P38295 451 aa2.09□□□□□ -2.07
snR55snR55 SDS24P38314 527 aa2.09□□□□□ -2.07
snR55snR55 PRM2P40534 656 aa2.09□□□□□ -2.07
snR55snR55 MDV1P47025 714 aa2.09□□□□□ -2.07
snR55snR55 ENT2Q05785 613 aa2.09□□□□□ -2.07
snR55snR55 TGS1Q12052 315 aa2.09□□□□□ -2.07
snR55snR55 PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
snR55snR55 RPS17AP02407 136 aaKnown RBP2.08□□□□□ -2.08
snR55snR55 GAL4P04386 881 aa2.08□□□□□ -2.08
snR55snR55 RPS17BP14127 136 aaKnown RBP2.08□□□□□ -2.08
snR55snR55 COQ3P27680 312 aa2.08□□□□□ -2.08
snR55snR55 CAP1P28495 268 aaKnown RBP2.08□□□□□ -2.08
snR55snR55 MTC7P32633 139 aa2.08□□□□□ -2.08
snR55snR55 DHR2P36009 735 aaPredicted RBP2.08□□□□□ -2.08
snR55snR55 PBP2P38151 413 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
snR55snR55 YDL183CP48569 320 aa2.08□□□□□ -2.08
snR55snR55 TAF4P50105 388 aa2.08□□□□□ -2.08
snR55snR55 UGO1Q03327 502 aa2.08□□□□□ -2.08
snR55snR55 PPN1Q04119 674 aa2.08□□□□□ -2.08
snR55snR55 CYK3Q07533 885 aa2.08□□□□□ -2.08
snR55snR55 YLR001CQ07895 862 aa2.08□□□□□ -2.08
snR55snR55 IMD2P38697 523 aaKnown RBP2.07□□□□□ -2.08
snR55snR55 LRO1P40345 661 aa2.07□□□□□ -2.08
snR55snR55 BUD6P41697 788 aa2.07□□□□□ -2.08
snR55snR55 TES1P41903 349 aaKnown RBP2.07□□□□□ -2.08
snR55snR55 IES1P43579 692 aa2.07□□□□□ -2.08
snR55snR55 IMD3P50095 523 aaKnown RBP2.07□□□□□ -2.08
snR55snR55 MET13P53128 600 aa2.07□□□□□ -2.08
snR55snR55 NOP15P53927 220 aaPredicted RBP2.07□□□□□ -2.08
snR55snR55 RPN4Q03465 531 aa2.07□□□□□ -2.08
snR55snR55 NRT1Q08485 598 aa2.07□□□□□ -2.08
snR55snR55 MAK32P23060 363 aa2.06□□□□□ -2.08
snR55snR55 RPT3P33298 428 aaKnown RBP2.06□□□□□ -2.08
snR55snR55 YEL025CP39991 1188 aa2.06□□□□□ -2.08
snR55snR55 NUP82P40368 713 aa2.06□□□□□ -2.08
snR55snR55 YIR016WP40572 265 aa2.06□□□□□ -2.08
snR55snR55 YGL260WP53056 76 aa2.06□□□□□ -2.08
snR55snR55 YNL092WP53934 400 aa2.06□□□□□ -2.08
snR55snR55 NSE5Q03718 556 aa2.06□□□□□ -2.08
snR55snR55 YOR131CQ12486 218 aa2.06□□□□□ -2.08
snR55snR55 YMR230W-AQ3E7B5 62 aa2.06□□□□□ -2.08
snR55snR55 PNO1Q99216 274 aaKnown RBP2.06□□□□□ -2.08
snR55snR55 CET1O13297 549 aaPredicted RBP2.05□□□□□ -2.08
snR55snR55 AAC1P04710 309 aa2.05□□□□□ -2.08
snR55snR55 ARC40P38328 384 aaKnown RBP2.05□□□□□ -2.08
snR55snR55 MTG2P38860 518 aa2.05□□□□□ -2.08
snR55snR55 YIL092WP40497 633 aa2.05□□□□□ -2.08
snR55snR55 BOP3P53958 396 aa2.05□□□□□ -2.08
snR55snR55 AAT1Q01802 451 aa2.05□□□□□ -2.08
snR55snR55 RTT103Q05543 409 aa2.05□□□□□ -2.08
snR55snR55 YCG1Q06680 1035 aa2.05□□□□□ -2.08
snR55snR55 GRS2Q06817 618 aa2.05□□□□□ -2.08
snR55snR55 GUD1Q07729 489 aa2.05□□□□□ -2.08
snR55snR55 MLH2Q07980 695 aa2.05□□□□□ -2.08
snR55snR55 DSE3Q08729 430 aa2.05□□□□□ -2.08
snR55snR55 YLR125WQ12138 136 aa2.05□□□□□ -2.08
snR55snR55 UBX3Q12229 455 aa2.05□□□□□ -2.08
snR55snR55 AHA1Q12449 350 aaKnown RBP2.05□□□□□ -2.08
snR55snR55 BI2P03873 423 aa2.04□□□□□ -2.08
snR55snR55 PHO8P11491 566 aa2.04□□□□□ -2.08
snR55snR55 CIN1P40987 1014 aa2.04□□□□□ -2.08
snR55snR55 SNU56Q03782 492 aaKnown RBP2.04□□□□□ -2.08
snR55snR55 YMR317WQ04893 1140 aa2.04□□□□□ -2.08
snR55snR55 YMR034CQ05131 434 aaPredicted RBP2.04□□□□□ -2.08
snR55snR55 NTG2Q08214 380 aa2.04□□□□□ -2.08
snR55snR55 ATX2Q12067 313 aa2.04□□□□□ -2.08
snR55snR55 GDA1P32621 518 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms