RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 RNR3P21672 869 aaKnown RBP-1.08□□□□□ -2.58
snR40snR40 CNE1P27825 502 aa-1.08□□□□□ -2.58
snR40snR40 NIC96P34077 839 aa-1.08□□□□□ -2.58
snR40snR40 GUS1P46655 708 aaKnown RBP RIP-Chip data-1.08□□□□□ -2.58not detected
snR40snR40 ESBP6P53918 673 aa-1.08□□□□□ -2.58
snR40snR40 WAR1Q03631 944 aa-1.08□□□□□ -2.58
snR40snR40 VHS1Q03785 461 aa-1.08□□□□□ -2.58
snR40snR40 ARP9Q05123 467 aa-1.08□□□□□ -2.58
snR40snR40 CYK3Q07533 885 aa-1.08□□□□□ -2.58
snR40snR40 DIA2Q08496 732 aaPredicted RBP-1.08□□□□□ -2.58
snR40snR40 GDH1P07262 454 aaKnown RBP-1.09□□□□□ -2.58
snR40snR40 AGA1P32323 725 aa-1.09□□□□□ -2.58
snR40snR40 RPN2P32565 945 aaKnown RBP-1.09□□□□□ -2.58
snR40snR40 YBP1P38315 674 aa-1.09□□□□□ -2.58
snR40snR40 TIF5P38431 405 aaKnown RBP-1.09□□□□□ -2.58
snR40snR40 SNF7P39929 240 aaKnown RBP-1.09□□□□□ -2.58
snR40snR40 RSC8P43609 557 aaKnown RBP-1.09□□□□□ -2.58
snR40snR40 CCM1P48237 864 aaPredicted RBP-1.09□□□□□ -2.58
snR40snR40 IZH1Q03419 316 aa-1.09□□□□□ -2.58
snR40snR40 YDR415CQ04033 374 aaPredicted RBP-1.09□□□□□ -2.58
snR40snR40 PCL8Q08966 492 aa-1.09□□□□□ -2.58
snR40snR40 ECM3Q99252 613 aa-1.09□□□□□ -2.58
snR40snR40 CHK1P38147 527 aa-1.1□□□□□ -2.59
snR40snR40 NOG2P53742 486 aaKnown RBP-1.1□□□□□ -2.59
snR40snR40 REC102Q02721 264 aa-1.1□□□□□ -2.59
snR40snR40 ARA2Q04212 335 aa-1.1□□□□□ -2.59
snR40snR40 ADE8P04161 214 aa-1.11□□□□□ -2.59
snR40snR40 CHO2P05374 869 aaKnown RBP-1.11□□□□□ -2.59
snR40snR40 PET127P32606 800 aa-1.11□□□□□ -2.59
snR40snR40 ERT1P38140 529 aa-1.11□□□□□ -2.59
snR40snR40 YIL077CP40508 320 aa-1.11□□□□□ -2.59
snR40snR40 MDJ2P42834 146 aa-1.11□□□□□ -2.59
snR40snR40 TPO2P53283 614 aa-1.11□□□□□ -2.59
snR40snR40 NOP15P53927 220 aaPredicted RBP-1.11□□□□□ -2.59
snR40snR40 YPS7Q06325 596 aa-1.11□□□□□ -2.59
snR40snR40 WHI5Q12416 295 aa-1.11□□□□□ -2.59
snR40snR40 YCK1P23291 538 aa-1.12□□□□□ -2.59
snR40snR40 LRE1P25579 583 aaKnown RBP-1.12□□□□□ -2.59
snR40snR40 PPH3P32345 308 aa-1.12□□□□□ -2.59
snR40snR40 TRS65P32893 560 aa-1.12□□□□□ -2.59
snR40snR40 RAD26P40352 1085 aa-1.12□□□□□ -2.59
snR40snR40 YJL107CP42947 387 aa-1.12□□□□□ -2.59
snR40snR40 YJR120WP47157 116 aa-1.12□□□□□ -2.59
snR40snR40 SAP4P53036 818 aa-1.12□□□□□ -2.59
snR40snR40 ZIP2P53061 704 aa-1.12□□□□□ -2.59
snR40snR40 TYW3P53177 273 aa-1.12□□□□□ -2.59
snR40snR40 NRM1P53718 249 aa-1.12□□□□□ -2.59
snR40snR40 BUD17P53727 317 aa-1.12□□□□□ -2.59
snR40snR40 HAL1Q01766 294 aa-1.12□□□□□ -2.59
snR40snR40 GDE1Q02979 1223 aa-1.12□□□□□ -2.59
snR40snR40 PIN3Q06449 215 aa-1.12□□□□□ -2.59
snR40snR40 YFT2Q06676 274 aa-1.12□□□□□ -2.59
snR40snR40 RTT10Q08924 1013 aa-1.12□□□□□ -2.59
snR40snR40 TMA46Q12000 345 aaKnown RBP-1.12□□□□□ -2.59
snR40snR40 HRT3Q12347 344 aa-1.12□□□□□ -2.59
snR40snR40 TY1B-AO13527 1196 aaKnown RBP-1.13□□□□□ -2.59
snR40snR40 YCL002CP25565 263 aa-1.13□□□□□ -2.59
snR40snR40 YIM1P28625 365 aa-1.13□□□□□ -2.59
snR40snR40 YKR051WP36142 418 aa-1.13□□□□□ -2.59
snR40snR40 YRO2P38079 344 aa-1.13□□□□□ -2.59
snR40snR40 GRS1P38088 690 aaKnown RBP-1.13□□□□□ -2.59
snR40snR40 PBP2P38151 413 aaKnown RBP RIP-Chip data-1.13□□□□□ -2.59not detected
snR40snR40 RTS2P40962 232 aa-1.13□□□□□ -2.59
snR40snR40 ASK10P48361 1146 aa-1.13□□□□□ -2.59
snR40snR40 YNL058CP53947 316 aa-1.13□□□□□ -2.59
snR40snR40 RPS15Q01855 142 aaKnown RBP-1.13□□□□□ -2.59
snR40snR40 VPS16Q03308 798 aa-1.13□□□□□ -2.59
snR40snR40 LRS4Q04087 347 aaKnown RBP-1.13□□□□□ -2.59
snR40snR40 ECI1Q05871 280 aa-1.13□□□□□ -2.59
snR40snR40 YLR225CQ05948 407 aaKnown RBP-1.13□□□□□ -2.59
snR40snR40 GIN4Q12263 1142 aa-1.13□□□□□ -2.59
snR40snR40 RBD2Q12270 262 aa-1.13□□□□□ -2.59
snR40snR40 RAD2P07276 1031 aa-1.14□□□□□ -2.59
snR40snR40 DAL7P21826 554 aa-1.14□□□□□ -2.59
snR40snR40 PCL1P24867 279 aa-1.14□□□□□ -2.59
snR40snR40 SWD3P38123 315 aa-1.14□□□□□ -2.59
snR40snR40 YBR284WP38150 797 aa-1.14□□□□□ -2.59
snR40snR40 SET5P38890 526 aaKnown RBP-1.14□□□□□ -2.59
snR40snR40 MBP1P39678 833 aa-1.14□□□□□ -2.59
snR40snR40 SIT1P39980 628 aa-1.14□□□□□ -2.59
snR40snR40 TOK1P40310 691 aa-1.14□□□□□ -2.59
snR40snR40 YJL213WP40896 331 aa-1.14□□□□□ -2.59
snR40snR40 PFS2P42841 465 aaKnown RBP-1.14□□□□□ -2.59
snR40snR40 VPS25P47142 202 aa-1.14□□□□□ -2.59
snR40snR40 YGR122WP53272 402 aa-1.14□□□□□ -2.59
snR40snR40 MFM1Q02783 413 aa-1.14□□□□□ -2.59
snR40snR40 PSR2Q07949 397 aa-1.14□□□□□ -2.59
snR40snR40 YPL216WQ08964 1102 aa-1.14□□□□□ -2.59
snR40snR40 YLR112WQ12130 139 aa-1.14□□□□□ -2.59
snR40snR40 YME1P32795 747 aa-1.15□□□□□ -2.59
snR40snR40 REC104P33323 182 aa-1.15□□□□□ -2.59
snR40snR40 PTK1P36002 662 aaPredicted RBP-1.15□□□□□ -2.59
snR40snR40 YPT10P38146 199 aa-1.15□□□□□ -2.59
snR40snR40 YHL050CP38721 697 aa-1.15□□□□□ -2.59
snR40snR40 RPN1P38764 993 aaKnown RBP-1.15□□□□□ -2.59
snR40snR40 YNL195CP40168 261 aa-1.15□□□□□ -2.59
snR40snR40 IML2P47031 731 aa-1.15□□□□□ -2.59
snR40snR40 YJR107WP47145 328 aa-1.15□□□□□ -2.59
snR40snR40 COX18P53239 316 aa-1.15□□□□□ -2.59
snR40snR40 EEB1Q02891 456 aa-1.15□□□□□ -2.59
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms