RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C CLB4P24871 460 aa2.83□□□□□ -1.96
DNL4YOR005C PGS1P25578 521 aa2.83□□□□□ -1.96
DNL4YOR005C YHL012WP38709 493 aa2.83□□□□□ -1.96
DNL4YOR005C NPR3P38742 1146 aa2.83□□□□□ -1.96
DNL4YOR005C ACO2P39533 789 aa2.83□□□□□ -1.96
DNL4YOR005C PSF2P40359 213 aa2.83□□□□□ -1.96
DNL4YOR005C RMD8P43620 662 aa2.83□□□□□ -1.96
DNL4YOR005C SET2P46995 733 aaKnown RBP2.83□□□□□ -1.96
DNL4YOR005C MNT2P53059 558 aa2.83□□□□□ -1.96
DNL4YOR005C PUS2P53167 370 aa2.83□□□□□ -1.96
DNL4YOR005C YMR210WQ03649 449 aa2.83□□□□□ -1.96
DNL4YOR005C CSR1Q06705 408 aaKnown RBP2.83□□□□□ -1.96
DNL4YOR005C GPR1Q12361 961 aa2.83□□□□□ -1.96
DNL4YOR005C DBP10Q12389 995 aaKnown RBP2.83□□□□□ -1.96
DNL4YOR005C MIS1P09440 975 aaKnown RBP2.82□□□□□ -1.96
DNL4YOR005C FRD1P32614 470 aaKnown RBP2.82□□□□□ -1.96
DNL4YOR005C GID8P40208 455 aa2.82□□□□□ -1.96
DNL4YOR005C YIL108WP40483 696 aaKnown RBP2.82□□□□□ -1.96
DNL4YOR005C YML6P51998 286 aa2.82□□□□□ -1.96
DNL4YOR005C SAP4P53036 818 aa2.82□□□□□ -1.96
DNL4YOR005C YNR071CP53757 342 aa2.82□□□□□ -1.96
DNL4YOR005C MAP1Q01662 387 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
DNL4YOR005C RRG1Q12167 365 aaPredicted RBP2.82□□□□□ -1.96
DNL4YOR005C BCK1Q01389 1478 aa2.82□□□□□ -1.96
DNL4YOR005C POL3P15436 1097 aa2.82□□□□□ -1.96
DNL4YOR005C FUR1P18562 216 aaKnown RBP2.82□□□□□ -1.96
DNL4YOR005C IME1P21190 360 aa2.82□□□□□ -1.96
DNL4YOR005C TRK2P28584 889 aa2.82□□□□□ -1.96
DNL4YOR005C EXG2P52911 562 aa2.82□□□□□ -1.96
DNL4YOR005C SYF1Q04048 859 aaPredicted RBP2.82□□□□□ -1.96
DNL4YOR005C SNO4Q04902 237 aa2.82□□□□□ -1.96
DNL4YOR005C UTP21Q06078 939 aaPredicted RBP2.82□□□□□ -1.96
DNL4YOR005C CDA1Q06702 301 aa2.82□□□□□ -1.96
DNL4YOR005C RSB1Q08417 382 aa2.82□□□□□ -1.96
DNL4YOR005C HSP33Q08914 237 aaKnown RBP2.82□□□□□ -1.96
DNL4YOR005C HSP32Q08992 237 aa2.82□□□□□ -1.96
DNL4YOR005C YVC1Q12324 675 aa2.82□□□□□ -1.96
DNL4YOR005C PGA3Q12746 312 aaKnown RBP2.82□□□□□ -1.96
DNL4YOR005C CMP2P14747 604 aa2.81□□□□□ -1.96
DNL4YOR005C OLE1P21147 510 aaKnown RBP2.81□□□□□ -1.96
DNL4YOR005C PXA2P34230 853 aa2.81□□□□□ -1.96
DNL4YOR005C ABZ1P37254 787 aaPredicted RBP2.81□□□□□ -1.96
DNL4YOR005C YBR225WP38321 900 aa2.81□□□□□ -1.96
DNL4YOR005C RRM3P38766 723 aa2.81□□□□□ -1.96
DNL4YOR005C SSY5P47002 699 aa2.81□□□□□ -1.96
DNL4YOR005C ARE2P53629 642 aaKnown RBP2.81□□□□□ -1.96
DNL4YOR005C TIM50Q02776 476 aa2.81□□□□□ -1.96
DNL4YOR005C NSE5Q03718 556 aa2.81□□□□□ -1.96
DNL4YOR005C AAD4Q07747 329 aa2.81□□□□□ -1.96
DNL4YOR005C HSF1P10961 833 aa2.81□□□□□ -1.96
DNL4YOR005C SWI4P25302 1093 aaKnown RBP2.81□□□□□ -1.96
DNL4YOR005C SET3P36124 751 aa2.81□□□□□ -1.96
DNL4YOR005C APN2P38207 520 aa2.81□□□□□ -1.96
DNL4YOR005C CTF8P38877 133 aa2.81□□□□□ -1.96
DNL4YOR005C RIX1P38883 763 aaPredicted RBP2.81□□□□□ -1.96
DNL4YOR005C NPR2P39923 615 aa2.81□□□□□ -1.96
DNL4YOR005C IMA1P53051 589 aa2.81□□□□□ -1.96
DNL4YOR005C PEF1P53238 335 aa2.81□□□□□ -1.96
DNL4YOR005C YGR130CP53278 816 aa2.81□□□□□ -1.96
DNL4YOR005C YGR250CP53316 781 aaKnown RBP2.81□□□□□ -1.96
DNL4YOR005C ASM4Q05166 528 aa2.81□□□□□ -1.96
DNL4YOR005C IRC3Q06683 689 aa2.81□□□□□ -1.96
DNL4YOR005C RIB2Q12362 591 aaKnown RBP2.81□□□□□ -1.96
DNL4YOR005C BIK1P11709 440 aa2.8□□□□□ -1.96
DNL4YOR005C BET2P20133 325 aa2.8□□□□□ -1.96
DNL4YOR005C RPC53P25441 422 aa2.8□□□□□ -1.96
DNL4YOR005C CWH43P25618 953 aa2.8□□□□□ -1.96
DNL4YOR005C SRP101P32916 621 aa2.8□□□□□ -1.96
DNL4YOR005C YPT7P32939 208 aa2.8□□□□□ -1.96
DNL4YOR005C YAP3P38749 330 aa2.8□□□□□ -1.96
DNL4YOR005C LRP1P38801 184 aaKnown RBP2.8□□□□□ -1.96
DNL4YOR005C UME6P39001 836 aa2.8□□□□□ -1.96
DNL4YOR005C YGR016WP53209 190 aa2.8□□□□□ -1.96
DNL4YOR005C ORC4P54791 529 aa2.8□□□□□ -1.96
DNL4YOR005C ERO1Q03103 563 aa2.8□□□□□ -1.96
DNL4YOR005C RCR2Q03446 210 aaKnown RBP2.8□□□□□ -1.96
DNL4YOR005C MSC2Q03455 724 aa2.8□□□□□ -1.96
DNL4YOR005C SIZ1Q04195 904 aa2.8□□□□□ -1.96
DNL4YOR005C MFB1Q04922 465 aa2.8□□□□□ -1.96
DNL4YOR005C YCG1Q06680 1035 aa2.8□□□□□ -1.96
DNL4YOR005C PSR1Q07800 427 aa2.8□□□□□ -1.96
DNL4YOR005C CKA1P15790 372 aa2.8□□□□□ -1.96
DNL4YOR005C TPM1P17536 199 aaKnown RBP2.8□□□□□ -1.96
DNL4YOR005C PRD1P25375 712 aa2.8□□□□□ -1.96
DNL4YOR005C CDC60P26637 1090 aaKnown RBP2.8□□□□□ -1.96
DNL4YOR005C VPH1P32563 840 aaKnown RBP2.8□□□□□ -1.96
DNL4YOR005C PET127P32606 800 aa2.8□□□□□ -1.96
DNL4YOR005C ANP1P32629 500 aa2.8□□□□□ -1.96
DNL4YOR005C MTC7P32633 139 aa2.8□□□□□ -1.96
DNL4YOR005C LRG1P35688 1017 aa2.8□□□□□ -1.96
DNL4YOR005C RFC5P38251 354 aa2.8□□□□□ -1.96
DNL4YOR005C TCD1P38756 429 aa2.8□□□□□ -1.96
DNL4YOR005C LSM5P40089 93 aaKnown RBP2.8□□□□□ -1.96
DNL4YOR005C PRM2P40534 656 aa2.8□□□□□ -1.96
DNL4YOR005C YIR007WP40566 764 aa2.8□□□□□ -1.96
DNL4YOR005C AXL1P40851 1208 aa2.8□□□□□ -1.96
DNL4YOR005C PSP1P50896 841 aaKnown RBP2.8□□□□□ -1.96
DNL4YOR005C HEF3P53978 1044 aaKnown RBP2.8□□□□□ -1.96
DNL4YOR005C TAP42Q04372 366 aa2.8□□□□□ -1.96
DNL4YOR005C CRD1Q07560 283 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms