RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeast

Gene TRM112, Length 408 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM112	YNR046W	PSY4	P38193	441 aa		4.22	□□□□□ -1.73
TRM112	YNR046W	PHO12	P38693	467 aa		4.22	□□□□□ -1.73
TRM112	YNR046W	YJL193W	P39542	402 aa		4.22	□□□□□ -1.73
TRM112	YNR046W	SPC72	P39723	622 aa		4.22	□□□□□ -1.73
TRM112	YNR046W	VFA1	P40080	203 aa		4.22	□□□□□ -1.73
TRM112	YNR046W	VID27	P40157	782 aa		4.22	□□□□□ -1.73
TRM112	YNR046W	MPS3	P47069	682 aa		4.22	□□□□□ -1.73
TRM112	YNR046W	YDL183C	P48569	320 aa		4.22	□□□□□ -1.73
TRM112	YNR046W	RIA1	P53893	1110 aa		4.22	□□□□□ -1.73
TRM112	YNR046W	MRPL13	Q02204	264 aa		4.22	□□□□□ -1.73
TRM112	YNR046W	YML131W	Q03102	365 aa		4.22	□□□□□ -1.73
TRM112	YNR046W	ARA2	Q04212	335 aa		4.22	□□□□□ -1.73
TRM112	YNR046W	EIS1	Q05050	843 aa	Known RBP	4.22	□□□□□ -1.73
TRM112	YNR046W	IWR1	Q07532	353 aa	Predicted RBP	4.22	□□□□□ -1.73
TRM112	YNR046W	TRM13	Q12383	476 aa		4.22	□□□□□ -1.73
TRM112	YNR046W	CTT1	P06115	562 aa		4.21	□□□□□ -1.74
TRM112	YNR046W	NUC1	P08466	329 aa		4.21	□□□□□ -1.74
TRM112	YNR046W	VPS33	P20795	691 aa		4.21	□□□□□ -1.74
TRM112	YNR046W	CLB4	P24871	460 aa		4.21	□□□□□ -1.74
TRM112	YNR046W	YCR015C	P25616	317 aa		4.21	□□□□□ -1.74
TRM112	YNR046W	PMI40	P29952	429 aa	Known RBP	4.21	□□□□□ -1.74
TRM112	YNR046W	BEM3	P32873	1128 aa		4.21	□□□□□ -1.74
TRM112	YNR046W	EHT1	P38295	451 aa		4.21	□□□□□ -1.74
TRM112	YNR046W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
TRM112	YNR046W	KHA1	P40309	873 aa		4.21	□□□□□ -1.74
TRM112	YNR046W	LRO1	P40345	661 aa		4.21	□□□□□ -1.74
TRM112	YNR046W	RAD26	P40352	1085 aa		4.21	□□□□□ -1.74
TRM112	YNR046W	SMK1	P41808	388 aa		4.21	□□□□□ -1.74
TRM112	YNR046W	ERR3	P42222	437 aa		4.21	□□□□□ -1.74
TRM112	YNR046W	TEL2	P53038	688 aa		4.21	□□□□□ -1.74
TRM112	YNR046W	FHN1	P53279	174 aa		4.21	□□□□□ -1.74
TRM112	YNR046W	ACS1	Q01574	713 aa		4.21	□□□□□ -1.74
TRM112	YNR046W	TRS130	Q03660	1102 aa		4.21	□□□□□ -1.74
TRM112	YNR046W	CIA1	Q05583	330 aa		4.21	□□□□□ -1.74
TRM112	YNR046W	YLR040C	Q07988	224 aa		4.21	□□□□□ -1.74
TRM112	YNR046W	GLT1	Q12680	2145 aa	Known RBP	4.21	□□□□□ -1.74
TRM112	YNR046W	FUB1	P25659	250 aa		4.2	□□□□□ -1.74
TRM112	YNR046W	TRM2	P33753	639 aa		4.2	□□□□□ -1.74
TRM112	YNR046W	PPS1	P38148	807 aa		4.2	□□□□□ -1.74
TRM112	YNR046W	NPR3	P38742	1146 aa		4.2	□□□□□ -1.74
TRM112	YNR046W	PUG1	P40100	303 aa		4.2	□□□□□ -1.74
TRM112	YNR046W	PSF2	P40359	213 aa		4.2	□□□□□ -1.74
TRM112	YNR046W	CAB2	P40506	365 aa		4.2	□□□□□ -1.74
TRM112	YNR046W	YGR054W	P53235	642 aa	Known RBP	4.2	□□□□□ -1.74
TRM112	YNR046W	SSL2	Q00578	843 aa		4.2	□□□□□ -1.74
TRM112	YNR046W	ATG21	Q02887	496 aa		4.2	□□□□□ -1.74
TRM112	YNR046W	VPS64	Q03944	604 aa		4.2	□□□□□ -1.74
TRM112	YNR046W	RGC1	Q06108	1083 aa	Known RBP	4.2	□□□□□ -1.74
TRM112	YNR046W	YSH1	Q06224	779 aa	Predicted RBP	4.2	□□□□□ -1.74
TRM112	YNR046W	OPY2	Q06810	360 aa		4.2	□□□□□ -1.74
TRM112	YNR046W	YDL086W	Q07505	273 aa		4.2	□□□□□ -1.74
TRM112	YNR046W	IZH3	Q07959	543 aa		4.2	□□□□□ -1.74
TRM112	YNR046W	YOL073C	Q08232	322 aa		4.2	□□□□□ -1.74
TRM112	YNR046W	GFA1	P14742	717 aa	Known RBP	4.19	□□□□□ -1.74
TRM112	YNR046W	RER1	P25560	188 aa		4.19	□□□□□ -1.74
TRM112	YNR046W	YCL049C	P25577	312 aa		4.19	□□□□□ -1.74
TRM112	YNR046W	MSS1	P32559	526 aa	Predicted RBP	4.19	□□□□□ -1.74
TRM112	YNR046W	DSS4	P32601	143 aa		4.19	□□□□□ -1.74
TRM112	YNR046W	KAP123	P40069	1113 aa	Known RBP	4.19	□□□□□ -1.74
TRM112	YNR046W	GTR1	Q00582	310 aa		4.19	□□□□□ -1.74
TRM112	YNR046W	TIM50	Q02776	476 aa		4.19	□□□□□ -1.74
TRM112	YNR046W	YMR018W	Q04364	514 aa		4.19	□□□□□ -1.74
TRM112	YNR046W	ENT2	Q05785	613 aa		4.19	□□□□□ -1.74
TRM112	YNR046W	ARR3	Q06598	404 aa		4.19	□□□□□ -1.74
TRM112	YNR046W	SSP2	Q08646	371 aa		4.19	□□□□□ -1.74
TRM112	YNR046W	MLH3	Q12083	715 aa		4.19	□□□□□ -1.74
TRM112	YNR046W	MTF2	P10849	440 aa		4.18	□□□□□ -1.74
TRM112	YNR046W	THR1	P17423	357 aa	Known RBP	4.18	□□□□□ -1.74
TRM112	YNR046W	PRP45	P28004	379 aa	Predicted RBP	4.18	□□□□□ -1.74
TRM112	YNR046W	CAP1	P28495	268 aa	Known RBP	4.18	□□□□□ -1.74
TRM112	YNR046W	SWC3	P31376	625 aa		4.18	□□□□□ -1.74
TRM112	YNR046W	FRD1	P32614	470 aa	Known RBP	4.18	□□□□□ -1.74
TRM112	YNR046W	RPT3	P33298	428 aa	Known RBP	4.18	□□□□□ -1.74
TRM112	YNR046W	RRN3	P36070	627 aa		4.18	□□□□□ -1.74
TRM112	YNR046W	APL3	P38065	1025 aa		4.18	□□□□□ -1.74
TRM112	YNR046W	UME6	P39001	836 aa		4.18	□□□□□ -1.74
TRM112	YNR046W	THI6	P41835	540 aa		4.18	□□□□□ -1.74
TRM112	YNR046W	POL31	P46957	487 aa		4.18	□□□□□ -1.74
TRM112	YNR046W	IDS2	P46958	469 aa		4.18	□□□□□ -1.74
TRM112	YNR046W	YGR151C	P53287	111 aa		4.18	□□□□□ -1.74
TRM112	YNR046W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	RIP-Chip
TRM112	YNR046W	ATG4	P53867	494 aa		4.18	□□□□□ -1.74
TRM112	YNR046W	SVL3	Q03088	825 aa	Known RBP	4.18	□□□□□ -1.74
TRM112	YNR046W	TRS31	Q03337	283 aa		4.18	□□□□□ -1.74
TRM112	YNR046W	NEW1	Q08972	1196 aa	Known RBP	4.18	□□□□□ -1.74
TRM112	YNR046W	ADE3	P07245	946 aa	Known RBP	4.17	□□□□□ -1.74
TRM112	YNR046W	NCP1	P16603	691 aa	Known RBP	4.17	□□□□□ -1.74
TRM112	YNR046W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
TRM112	YNR046W	BET2	P20133	325 aa		4.17	□□□□□ -1.74
TRM112	YNR046W	UBC1	P21734	215 aa	Known RBP	4.17	□□□□□ -1.74
TRM112	YNR046W	VPS34	P22543	875 aa		4.17	□□□□□ -1.74
TRM112	YNR046W	RIT1	P23796	513 aa		4.17	□□□□□ -1.74
TRM112	YNR046W	GFD2	P25370	566 aa	Known RBP	4.17	□□□□□ -1.74
TRM112	YNR046W	SLC1	P33333	303 aa		4.17	□□□□□ -1.74
TRM112	YNR046W	CBR1	P38626	284 aa	Known RBP	4.17	□□□□□ -1.74
TRM112	YNR046W	YHL017W	P38745	532 aa		4.17	□□□□□ -1.74
TRM112	YNR046W	FSH1	P38777	243 aa	Known RBP	4.17	□□□□□ -1.74
TRM112	YNR046W	ARG2	P40360	574 aa		4.17	□□□□□ -1.74
TRM112	YNR046W	IRC24	P40580	263 aa		4.17	□□□□□ -1.74
TRM112	YNR046W	CTR1	P49573	406 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 59.2 ms