RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W YFL064CP43540 174 aa1.9□□□□□ -2.11
RTP1YMR185W MIG2P53035 382 aa1.9□□□□□ -2.11
RTP1YMR185W NUT1P53114 1132 aa1.9□□□□□ -2.11
RTP1YMR185W NNF2P53253 936 aa1.9□□□□□ -2.11
RTP1YMR185W BNI5P53890 448 aaKnown RBP1.9□□□□□ -2.11
RTP1YMR185W CBK1P53894 756 aa1.9□□□□□ -2.11
RTP1YMR185W RSC4Q02206 625 aa1.9□□□□□ -2.11
RTP1YMR185W ATG16Q03818 150 aa1.9□□□□□ -2.11
RTP1YMR185W NBA1Q08229 501 aaKnown RBP1.9□□□□□ -2.11
RTP1YMR185W GET4Q12125 312 aa1.9□□□□□ -2.11
RTP1YMR185W YBL111CQ3E7Y5 667 aa1.9□□□□□ -2.11
RTP1YMR185W TUF1P02992 437 aaKnown RBP1.9□□□□□ -2.11
RTP1YMR185W RPS3P05750 240 aaKnown RBP1.9□□□□□ -2.11
RTP1YMR185W CLN3P13365 580 aa1.9□□□□□ -2.11
RTP1YMR185W EXO70P19658 623 aa1.9□□□□□ -2.11
RTP1YMR185W TYR1P20049 452 aa1.9□□□□□ -2.11
RTP1YMR185W URA4P20051 364 aa1.9□□□□□ -2.11
RTP1YMR185W PRP4P20053 465 aaKnown RBP1.9□□□□□ -2.11
RTP1YMR185W RET1P22276 1149 aaKnown RBP1.9□□□□□ -2.11
RTP1YMR185W RPT3P33298 428 aaKnown RBP1.9□□□□□ -2.11
RTP1YMR185W GAA1P39012 614 aa1.9□□□□□ -2.11
RTP1YMR185W JEM1P40358 645 aa1.9□□□□□ -2.11
RTP1YMR185W YIR042CP40586 236 aa1.9□□□□□ -2.11
RTP1YMR185W RLP7P40693 322 aaKnown RBP1.9□□□□□ -2.11
RTP1YMR185W TOS3P43637 560 aa1.9□□□□□ -2.11
RTP1YMR185W NMD5P46970 1048 aa1.9□□□□□ -2.11
RTP1YMR185W SPT20P50875 604 aa1.9□□□□□ -2.11
RTP1YMR185W SNO2P53823 222 aa1.9□□□□□ -2.11
RTP1YMR185W FOL1P53848 824 aa1.9□□□□□ -2.11
RTP1YMR185W YNL058CP53947 316 aa1.9□□□□□ -2.11
RTP1YMR185W CDC55Q00362 526 aa1.9□□□□□ -2.11
RTP1YMR185W UTP6Q02354 440 aaKnown RBP1.9□□□□□ -2.11
RTP1YMR185W IRC4Q03036 179 aa1.9□□□□□ -2.11
RTP1YMR185W ADY4Q05955 493 aa1.9□□□□□ -2.11
RTP1YMR185W RSB1Q08417 382 aa1.9□□□□□ -2.11
RTP1YMR185W WRS1Q12109 432 aaKnown RBP1.9□□□□□ -2.11
RTP1YMR185W NOT5Q12514 560 aaPredicted RBP1.9□□□□□ -2.11
RTP1YMR185W SPO16P17122 198 aa1.89□□□□□ -2.11
RTP1YMR185W EST1P17214 699 aaPredicted RBP1.89□□□□□ -2.11
RTP1YMR185W KRE2P27809 442 aa1.89□□□□□ -2.11
RTP1YMR185W KIP1P28742 1111 aa1.89□□□□□ -2.11
RTP1YMR185W TOA1P32773 286 aa1.89□□□□□ -2.11
RTP1YMR185W AFG2P32794 780 aa1.89□□□□□ -2.11
RTP1YMR185W MRE11P32829 692 aa1.89□□□□□ -2.11
RTP1YMR185W VPS35P34110 944 aa1.89□□□□□ -2.11
RTP1YMR185W COY1P34237 679 aa1.89□□□□□ -2.11
RTP1YMR185W TRZ1P36159 838 aaPredicted RBP1.89□□□□□ -2.11
RTP1YMR185W SRL3P36167 246 aa1.89□□□□□ -2.11
RTP1YMR185W TIF5P38431 405 aaKnown RBP1.89□□□□□ -2.11
RTP1YMR185W SPC97P38863 823 aa1.89□□□□□ -2.11
RTP1YMR185W ALG5P40350 334 aa1.89□□□□□ -2.11
RTP1YMR185W SAM37P50110 327 aa1.89□□□□□ -2.11
RTP1YMR185W NBP1P52919 319 aaPredicted RBP1.89□□□□□ -2.11
RTP1YMR185W NMA2P53204 395 aa1.89□□□□□ -2.11
RTP1YMR185W CPR6P53691 371 aaKnown RBP1.89□□□□□ -2.11
RTP1YMR185W NOP15P53927 220 aaPredicted RBP1.89□□□□□ -2.11
RTP1YMR185W DAK1P54838 584 aaKnown RBP1.89□□□□□ -2.11
RTP1YMR185W SRL4Q03085 281 aa1.89□□□□□ -2.11
RTP1YMR185W HOT1Q03213 719 aa1.89□□□□□ -2.11
RTP1YMR185W HFD1Q04458 532 aa1.89□□□□□ -2.11
RTP1YMR185W DON1Q05610 365 aa1.89□□□□□ -2.11
RTP1YMR185W SNX3Q08826 162 aaKnown RBP1.89□□□□□ -2.11
RTP1YMR185W YPL277CQ08989 487 aa1.89□□□□□ -2.11
RTP1YMR185W GPM3Q12326 303 aa1.89□□□□□ -2.11
RTP1YMR185W RIB2Q12362 591 aaKnown RBP1.89□□□□□ -2.11
RTP1YMR185W YPT6Q99260 215 aa1.89□□□□□ -2.11
RTP1YMR185W DED1P06634 604 aaKnown RBP1.89□□□□□ -2.11
RTP1YMR185W GCR1P07261 785 aa1.89□□□□□ -2.11
RTP1YMR185W PHO8P11491 566 aa1.89□□□□□ -2.11
RTP1YMR185W PMS1P14242 873 aa1.89□□□□□ -2.11
RTP1YMR185W POL3P15436 1097 aa1.89□□□□□ -2.11
RTP1YMR185W PRP6P19735 899 aaPredicted RBP1.89□□□□□ -2.11
RTP1YMR185W PWP1P21304 576 aaKnown RBP1.89□□□□□ -2.11
RTP1YMR185W SRM1P21827 482 aa1.89□□□□□ -2.11
RTP1YMR185W GSY1P23337 708 aa1.89□□□□□ -2.11
RTP1YMR185W LHS1P36016 881 aa1.89□□□□□ -2.11
RTP1YMR185W RFC3P38629 340 aa1.89□□□□□ -2.11
RTP1YMR185W SIP3P38717 1229 aa1.89□□□□□ -2.11
RTP1YMR185W MPH1P40562 993 aa1.89□□□□□ -2.11
RTP1YMR185W SAD1P43589 448 aa1.89□□□□□ -2.11
RTP1YMR185W ACF4P47129 309 aa1.89□□□□□ -2.11
RTP1YMR185W BRO1P48582 844 aa1.89□□□□□ -2.11
RTP1YMR185W ERP6P53198 216 aa1.89□□□□□ -2.11
RTP1YMR185W COS6P53344 381 aa1.89□□□□□ -2.11
RTP1YMR185W DSL1P53847 754 aa1.89□□□□□ -2.11
RTP1YMR185W JJJ1P53863 590 aa1.89□□□□□ -2.11
RTP1YMR185W OYE2Q03558 400 aaKnown RBP1.89□□□□□ -2.11
RTP1YMR185W ATG17Q06410 417 aa1.89□□□□□ -2.11
RTP1YMR185W PCL8Q08966 492 aa1.89□□□□□ -2.11
RTP1YMR185W BUG1Q12191 341 aa1.89□□□□□ -2.11
RTP1YMR185W YDL177CQ12257 170 aa1.89□□□□□ -2.11
RTP1YMR185W YBL113CQ7M4S9 792 aa1.89□□□□□ -2.11
RTP1YMR185W MOT1P32333 1867 aa1.89□□□□□ -2.11
RTP1YMR185W RPS13P05756 151 aaKnown RBP1.88□□□□□ -2.11
RTP1YMR185W REC107P21651 314 aa1.88□□□□□ -2.11
RTP1YMR185W MRPL25P23369 157 aa1.88□□□□□ -2.11
RTP1YMR185W PRE8P23639 250 aa1.88□□□□□ -2.11
RTP1YMR185W SPS22P25380 463 aa1.88□□□□□ -2.11
RTP1YMR185W PRP40P33203 583 aaKnown RBP1.88□□□□□ -2.11
RTP1YMR185W MCD4P36051 919 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms