RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W PSF2P40359 213 aa5.62□□□□□ -1.51
VPS36YLR417W RGC1Q06108 1083 aaKnown RBP5.62□□□□□ -1.51
VPS36YLR417W ZRT2Q12436 422 aa5.62□□□□□ -1.51
VPS36YLR417W PCK1P10963 549 aa5.61□□□□□ -1.51
VPS36YLR417W PRP45P28004 379 aaPredicted RBP5.61□□□□□ -1.51
VPS36YLR417W CHS3P29465 1165 aa5.61□□□□□ -1.51
VPS36YLR417W MRPL36P36531 177 aa5.61□□□□□ -1.51
VPS36YLR417W EHT1P38295 451 aa5.61□□□□□ -1.51
VPS36YLR417W MNT3P40549 630 aa5.61□□□□□ -1.51
VPS36YLR417W POL31P46957 487 aa5.61□□□□□ -1.51
VPS36YLR417W RFX1P48743 811 aa5.61□□□□□ -1.51
VPS36YLR417W ARA2Q04212 335 aa5.61□□□□□ -1.51
VPS36YLR417W YOL087CQ99247 1116 aa5.61□□□□□ -1.51
VPS36YLR417W PMA1P05030 918 aaKnown RBP5.6□□□□□ -1.51
VPS36YLR417W HSC82P15108 705 aaKnown RBP5.6□□□□□ -1.51
VPS36YLR417W VPS33P20795 691 aa5.6□□□□□ -1.51
VPS36YLR417W YCR015CP25616 317 aa5.6□□□□□ -1.51
VPS36YLR417W THI80P35202 319 aa5.6□□□□□ -1.51
VPS36YLR417W YBR138CP38277 524 aa5.6□□□□□ -1.51
VPS36YLR417W TMN3P40071 706 aa5.6□□□□□ -1.51
VPS36YLR417W VFA1P40080 203 aa5.6□□□□□ -1.51
VPS36YLR417W YJL163CP46996 555 aa5.6□□□□□ -1.51
VPS36YLR417W IMA1P53051 589 aa5.6□□□□□ -1.51
VPS36YLR417W MEP3P53390 489 aa5.6□□□□□ -1.51
VPS36YLR417W ENT2Q05785 613 aa5.6□□□□□ -1.51
VPS36YLR417W SIR3P06701 978 aa5.6□□□□□ -1.51
VPS36YLR417W BIK1P11709 440 aa5.6□□□□□ -1.51
VPS36YLR417W RIT1P23796 513 aa5.6□□□□□ -1.51
VPS36YLR417W ERG4P25340 473 aa5.6□□□□□ -1.51
VPS36YLR417W NTH1P32356 751 aa5.6□□□□□ -1.51
VPS36YLR417W SLC1P33333 303 aa5.6□□□□□ -1.51
VPS36YLR417W YJL193WP39542 402 aa5.6□□□□□ -1.51
VPS36YLR417W LRO1P40345 661 aa5.6□□□□□ -1.51
VPS36YLR417W CAB2P40506 365 aa5.6□□□□□ -1.51
VPS36YLR417W BNA1P47096 177 aa5.6□□□□□ -1.51
VPS36YLR417W ARR3Q06598 404 aa5.6□□□□□ -1.51
VPS36YLR417W IRC13Q08630 104 aa5.6□□□□□ -1.51
VPS36YLR417W FRE5Q08908 694 aa5.6□□□□□ -1.51
VPS36YLR417W YKL033W-AQ86ZR7 236 aa5.6□□□□□ -1.51
VPS36YLR417W ADE3P07245 946 aaKnown RBP5.59□□□□□ -1.51
VPS36YLR417W SWI4P25302 1093 aaKnown RBP5.59□□□□□ -1.51
VPS36YLR417W EFT1P32324 842 aaKnown RBP5.59□□□□□ -1.51
VPS36YLR417W MSS1P32559 526 aaPredicted RBP5.59□□□□□ -1.51
VPS36YLR417W RPT3P33298 428 aaKnown RBP5.59□□□□□ -1.51
VPS36YLR417W HIS7P33734 552 aaKnown RBP5.59□□□□□ -1.51
VPS36YLR417W HRB1P38922 454 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
VPS36YLR417W MPT5P39016 859 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
VPS36YLR417W YEL025CP39991 1188 aa5.59□□□□□ -1.51
VPS36YLR417W TMA108P40462 946 aa5.59□□□□□ -1.51
VPS36YLR417W CTF18P49956 741 aa5.59□□□□□ -1.51
VPS36YLR417W PAN2P53010 1115 aaPredicted RBP5.59□□□□□ -1.51
VPS36YLR417W TIM50Q02776 476 aa5.59□□□□□ -1.51
VPS36YLR417W TRS31Q03337 283 aa5.59□□□□□ -1.51
VPS36YLR417W VPS64Q03944 604 aa5.59□□□□□ -1.51
VPS36YLR417W ADY4Q05955 493 aa5.59□□□□□ -1.51
VPS36YLR417W TFC6Q06339 672 aa5.59□□□□□ -1.51
VPS36YLR417W LEU2P04173 364 aaPredicted RBP5.58□□□□□ -1.52
VPS36YLR417W SNF1P06782 633 aaKnown RBP5.58□□□□□ -1.52
VPS36YLR417W FSH1P38777 243 aaKnown RBP5.58□□□□□ -1.52
VPS36YLR417W NOC2P39744 710 aaKnown RBP5.58□□□□□ -1.52
VPS36YLR417W FMP52P40008 231 aa5.58□□□□□ -1.52
VPS36YLR417W MPS3P47069 682 aa5.58□□□□□ -1.52
VPS36YLR417W CLU1Q03690 1277 aaKnown RBP5.58□□□□□ -1.52
VPS36YLR417W CSR1Q06705 408 aaKnown RBP5.58□□□□□ -1.52
VPS36YLR417W YDR056CQ12025 205 aa5.58□□□□□ -1.52
VPS36YLR417W TRM13Q12383 476 aa5.58□□□□□ -1.52
VPS36YLR417W CTT1P06115 562 aa5.57□□□□□ -1.52
VPS36YLR417W KHA1P40309 873 aa5.57□□□□□ -1.52
VPS36YLR417W SAP4P53036 818 aa5.57□□□□□ -1.52
VPS36YLR417W YGR054WP53235 642 aaKnown RBP5.57□□□□□ -1.52
VPS36YLR417W ATG21Q02887 496 aa5.57□□□□□ -1.52
VPS36YLR417W VID22Q05934 901 aa5.57□□□□□ -1.52
VPS36YLR417W AIM39Q08223 395 aa5.57□□□□□ -1.52
VPS36YLR417W CTP1P38152 299 aa5.57□□□□□ -1.52
VPS36YLR417W IFA38P38286 347 aa5.57□□□□□ -1.52
VPS36YLR417W UME6P39001 836 aa5.57□□□□□ -1.52
VPS36YLR417W BST1P43571 1029 aa5.57□□□□□ -1.52
VPS36YLR417W FHN1P53279 174 aa5.57□□□□□ -1.52
VPS36YLR417W YAP1802P53309 568 aa5.57□□□□□ -1.52
VPS36YLR417W RNT1Q02555 471 aa5.57□□□□□ -1.52
VPS36YLR417W IZH3Q07959 543 aa5.57□□□□□ -1.52
VPS36YLR417W RTP1Q12751 981 aa5.57□□□□□ -1.52
VPS36YLR417W BET2P20133 325 aa5.56□□□□□ -1.52
VPS36YLR417W RNQ1P25367 405 aa5.56□□□□□ -1.52
VPS36YLR417W IMP2'P32351 346 aa5.56□□□□□ -1.52
VPS36YLR417W ARP2P32381 391 aaKnown RBP5.56□□□□□ -1.52
VPS36YLR417W ELM1P32801 640 aa5.56□□□□□ -1.52
VPS36YLR417W PHO11P35842 467 aa5.56□□□□□ -1.52
VPS36YLR417W DHR2P36009 735 aaPredicted RBP5.56□□□□□ -1.52
VPS36YLR417W PHO12P38693 467 aa5.56□□□□□ -1.52
VPS36YLR417W TEL2P53038 688 aa5.56□□□□□ -1.52
VPS36YLR417W TRM8Q12009 286 aa5.56□□□□□ -1.52
VPS36YLR417W ALG7P07286 448 aa5.55□□□□□ -1.52
VPS36YLR417W PFK2P16862 959 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
VPS36YLR417W DSS4P32601 143 aa5.55□□□□□ -1.52
VPS36YLR417W COS12P53053 380 aa5.55□□□□□ -1.52
VPS36YLR417W AIM6Q07716 390 aa5.55□□□□□ -1.52
VPS36YLR417W ABF1P14164 731 aa5.54□□□□□ -1.52
VPS36YLR417W HCM1P25364 564 aa5.54□□□□□ -1.52
VPS36YLR417W RPS7AP26786 190 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms