RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C RSM26P47141 266 aa5.3□□□□□ -1.56
BUD28YLR062C COQ6P53318 479 aa5.3□□□□□ -1.56
BUD28YLR062C UME1Q03010 460 aa5.3□□□□□ -1.56
BUD28YLR062C PIR3Q03180 325 aa5.3□□□□□ -1.56
BUD28YLR062C SPG3Q04398 127 aaPredicted RBP5.3□□□□□ -1.56
BUD28YLR062C ECM38Q05902 660 aaPredicted RBP5.3□□□□□ -1.56
BUD28YLR062C PMT7Q06644 662 aa5.3□□□□□ -1.56
BUD28YLR062C EMP46Q12396 444 aa5.3□□□□□ -1.56
BUD28YLR062C BI3Q9ZZW7 517 aa5.3□□□□□ -1.56
BUD28YLR062C IRA1P18963 3092 aa5.3□□□□□ -1.56
BUD28YLR062C SEN1Q00416 2231 aaKnown RBP5.29□□□□□ -1.56
BUD28YLR062C CET1O13297 549 aaPredicted RBP5.29□□□□□ -1.56
BUD28YLR062C CAN1P04817 590 aa5.29□□□□□ -1.56
BUD28YLR062C PHO13P19881 312 aa5.29□□□□□ -1.56
BUD28YLR062C FPR1P20081 114 aaKnown RBP5.29□□□□□ -1.56
BUD28YLR062C VMA4P22203 233 aaKnown RBP5.29□□□□□ -1.56
BUD28YLR062C ROX1P25042 368 aa5.29□□□□□ -1.56
BUD28YLR062C MRPL10P36520 322 aa5.29□□□□□ -1.56
BUD28YLR062C FMO1P38866 432 aa5.29□□□□□ -1.56
BUD28YLR062C HEM14P40012 539 aa5.29□□□□□ -1.56
BUD28YLR062C ERG10P41338 398 aaKnown RBP5.29□□□□□ -1.56
BUD28YLR062C UFE1P41834 346 aa5.29□□□□□ -1.56
BUD28YLR062C SNZ3P43545 298 aa5.29□□□□□ -1.56
BUD28YLR062C SNZ2P53824 298 aa5.29□□□□□ -1.56
BUD28YLR062C CAF120P53836 1060 aa5.29□□□□□ -1.56
BUD28YLR062C YNL144CP53907 740 aa5.29□□□□□ -1.56
BUD28YLR062C SYH1Q02875 849 aaKnown RBP5.29□□□□□ -1.56
BUD28YLR062C AIM32Q04689 311 aa5.29□□□□□ -1.56
BUD28YLR062C YLR287CQ05881 355 aa5.29□□□□□ -1.56
BUD28YLR062C YCG1Q06680 1035 aa5.29□□□□□ -1.56
BUD28YLR062C ARP7Q12406 477 aa5.29□□□□□ -1.56
BUD28YLR062C ACC1Q00955 2233 aaKnown RBP5.29□□□□□ -1.56
BUD28YLR062C MSB2P32334 1306 aa5.28□□□□□ -1.56
BUD28YLR062C PUT4P15380 627 aa5.28□□□□□ -1.56
BUD28YLR062C GUT2P32191 649 aa5.28□□□□□ -1.56
BUD28YLR062C KNS1P32350 737 aaPredicted RBP5.28□□□□□ -1.56
BUD28YLR062C RRN6P32786 894 aa5.28□□□□□ -1.56
BUD28YLR062C STE5P32917 917 aa5.28□□□□□ -1.56
BUD28YLR062C SRB2P34162 210 aa5.28□□□□□ -1.56
BUD28YLR062C HSL7P38274 827 aa5.28□□□□□ -1.56
BUD28YLR062C TDA3P38758 523 aa5.28□□□□□ -1.56
BUD28YLR062C RTT107P38850 1070 aa5.28□□□□□ -1.56
BUD28YLR062C PSY2P40164 858 aa5.28□□□□□ -1.56
BUD28YLR062C VPS75P53853 264 aa5.28□□□□□ -1.56
BUD28YLR062C MFB1Q04922 465 aa5.28□□□□□ -1.56
BUD28YLR062C YDR222WQ04925 415 aa5.28□□□□□ -1.56
BUD28YLR062C RTN1Q04947 295 aaKnown RBP5.28□□□□□ -1.56
BUD28YLR062C SIL1Q08199 421 aa5.28□□□□□ -1.56
BUD28YLR062C AIM39Q08223 395 aa5.28□□□□□ -1.56
BUD28YLR062C THI20Q08224 551 aa5.28□□□□□ -1.56
BUD28YLR062C YOR059CQ08448 450 aaKnown RBP5.28□□□□□ -1.56
BUD28YLR062C SVS1Q12254 260 aa5.28□□□□□ -1.56
BUD28YLR062C MCM16Q12262 181 aa5.28□□□□□ -1.56
BUD28YLR062C UBR1P19812 1950 aa5.27□□□□□ -1.57
BUD28YLR062C RAS1P01119 309 aa5.27□□□□□ -1.57
BUD28YLR062C PAB1P04147 577 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
BUD28YLR062C KAR3P17119 729 aa5.27□□□□□ -1.57
BUD28YLR062C SPO12P17123 173 aa5.27□□□□□ -1.57
BUD28YLR062C VAC17P25591 423 aa5.27□□□□□ -1.57
BUD28YLR062C YIH1P25637 258 aa5.27□□□□□ -1.57
BUD28YLR062C MSH2P25847 964 aa5.27□□□□□ -1.57
BUD28YLR062C CAP1P28495 268 aaKnown RBP5.27□□□□□ -1.57
BUD28YLR062C SEC1P30619 724 aaKnown RBP5.27□□□□□ -1.57
BUD28YLR062C SGE1P33335 543 aa5.27□□□□□ -1.57
BUD28YLR062C JNM1P36224 373 aa5.27□□□□□ -1.57
BUD28YLR062C NMD3P38861 518 aaKnown RBP5.27□□□□□ -1.57
BUD28YLR062C SMC2P38989 1170 aaKnown RBP5.27□□□□□ -1.57
BUD28YLR062C YER189WP40104 122 aa5.27□□□□□ -1.57
BUD28YLR062C YIR007WP40566 764 aa5.27□□□□□ -1.57
BUD28YLR062C RTT101P47050 842 aa5.27□□□□□ -1.57
BUD28YLR062C NMA2P53204 395 aa5.27□□□□□ -1.57
BUD28YLR062C YGR111WP53265 400 aa5.27□□□□□ -1.57
BUD28YLR062C YNR065CP53751 1116 aa5.27□□□□□ -1.57
BUD28YLR062C CWC24P53769 259 aa5.27□□□□□ -1.57
BUD28YLR062C SXM1Q04175 944 aaKnown RBP5.27□□□□□ -1.57
BUD28YLR062C YML053CQ04978 212 aa5.27□□□□□ -1.57
BUD28YLR062C HMI1Q12039 706 aa5.27□□□□□ -1.57
BUD28YLR062C RRP6Q12149 733 aaKnown RBP5.27□□□□□ -1.57
BUD28YLR062C PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
BUD28YLR062C VPS5Q92331 675 aa5.27□□□□□ -1.57
BUD28YLR062C NUM1Q00402 2748 aa5.26□□□□□ -1.57
BUD28YLR062C CYC8P14922 966 aa5.26□□□□□ -1.57
BUD28YLR062C MET22P32179 357 aa5.26□□□□□ -1.57
BUD28YLR062C YKL050CP35736 922 aa5.26□□□□□ -1.57
BUD28YLR062C KTR4P38131 464 aa5.26□□□□□ -1.57
BUD28YLR062C LYS9P38999 446 aa5.26□□□□□ -1.57
BUD28YLR062C DUN1P39009 513 aa5.26□□□□□ -1.57
BUD28YLR062C OSW5P40219 148 aa5.26□□□□□ -1.57
BUD28YLR062C TMA108P40462 946 aa5.26□□□□□ -1.57
BUD28YLR062C MRX6P48564 524 aa5.26□□□□□ -1.57
BUD28YLR062C VEL1P53058 206 aa5.26□□□□□ -1.57
BUD28YLR062C TRM112P53738 135 aaPredicted RBP5.26□□□□□ -1.57
BUD28YLR062C EAF7P53911 425 aaKnown RBP5.26□□□□□ -1.57
BUD28YLR062C KTR6P54070 446 aa5.26□□□□□ -1.57
BUD28YLR062C ELP3Q02908 557 aaKnown RBP5.26□□□□□ -1.57
BUD28YLR062C YMR206WQ03695 313 aa5.26□□□□□ -1.57
BUD28YLR062C CIR2Q08822 631 aa5.26□□□□□ -1.57
BUD28YLR062C NDD1Q08887 554 aa5.26□□□□□ -1.57
BUD28YLR062C NEW1Q08972 1196 aaKnown RBP5.26□□□□□ -1.57
BUD28YLR062C ATG9Q12142 997 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms