RNA–Protein interactions for RNA: YIL003W

CFD1, Transcript of Highly conserved iron-sulfur cluster binding protein, yeast

Gene CFD1, Length 882 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CFD1	YIL003W	DIN7	Q12086	430 aa		4.12	□□□□□ -1.75
CFD1	YIL003W	RRI2	Q12348	645 aa		4.12	□□□□□ -1.75
CFD1	YIL003W	SWM1	Q12379	170 aa		4.12	□□□□□ -1.75
CFD1	YIL003W	KCS1	Q12494	1050 aa		4.12	□□□□□ -1.75
CFD1	YIL003W	YOL087C	Q99247	1116 aa		4.12	□□□□□ -1.75
CFD1	YIL003W	RRP5	Q05022	1729 aa	Known RBP	4.12	□□□□□ -1.75
CFD1	YIL003W	VAS1	P07806	1104 aa	Known RBP	4.11	□□□□□ -1.75
CFD1	YIL003W	CDC6	P09119	513 aa		4.11	□□□□□ -1.75
CFD1	YIL003W	CBP3	P21560	335 aa		4.11	□□□□□ -1.75
CFD1	YIL003W	EMC1	P25574	760 aa		4.11	□□□□□ -1.75
CFD1	YIL003W	CDC20	P26309	610 aa		4.11	□□□□□ -1.75
CFD1	YIL003W	MPE1	P35728	441 aa	Known RBP	4.11	□□□□□ -1.75
CFD1	YIL003W	PSY4	P38193	441 aa		4.11	□□□□□ -1.75
CFD1	YIL003W	YHR033W	P38690	423 aa		4.11	□□□□□ -1.75
CFD1	YIL003W	YHR112C	P38716	378 aa		4.11	□□□□□ -1.75
CFD1	YIL003W	NOC2	P39744	710 aa	Known RBP	4.11	□□□□□ -1.75
CFD1	YIL003W	MNT3	P40549	630 aa		4.11	□□□□□ -1.75
CFD1	YIL003W	BUD8	P41698	603 aa		4.11	□□□□□ -1.75
CFD1	YIL003W	CHA4	P43634	648 aa		4.11	□□□□□ -1.75
CFD1	YIL003W	MNN10	P50108	393 aa	Known RBP	4.11	□□□□□ -1.75
CFD1	YIL003W	MNT2	P53059	558 aa		4.11	□□□□□ -1.75
CFD1	YIL003W	ARC35	P53731	342 aa	Known RBP	4.11	□□□□□ -1.75
CFD1	YIL003W	SLU7	Q02775	382 aa	Known RBP	4.11	□□□□□ -1.75
CFD1	YIL003W	PKH1	Q03407	766 aa		4.11	□□□□□ -1.75
CFD1	YIL003W	MCM21	Q06675	368 aa		4.11	□□□□□ -1.75
CFD1	YIL003W	IMH1	Q06704	911 aa	Known RBP	4.11	□□□□□ -1.75
CFD1	YIL003W	SGO1	Q08490	590 aa		4.11	□□□□□ -1.75
CFD1	YIL003W	HMI1	Q12039	706 aa		4.11	□□□□□ -1.75
CFD1	YIL003W	SSM4	P40318	1319 aa		4.11	□□□□□ -1.75
CFD1	YIL003W	RTC1	Q08281	1341 aa		4.11	□□□□□ -1.75
CFD1	YIL003W	RPP2A	P05319	106 aa	Known RBP	4.1	□□□□□ -1.75
CFD1	YIL003W	PMI40	P29952	429 aa	Known RBP	4.1	□□□□□ -1.75
CFD1	YIL003W	NGG1	P32494	702 aa		4.1	□□□□□ -1.75
CFD1	YIL003W	YPT7	P32939	208 aa		4.1	□□□□□ -1.75
CFD1	YIL003W	APL2	P36000	726 aa	Predicted RBP	4.1	□□□□□ -1.75
CFD1	YIL003W	YBR259W	P38338	688 aa		4.1	□□□□□ -1.75
CFD1	YIL003W	SSP120	P39931	234 aa	Known RBP	4.1	□□□□□ -1.75
CFD1	YIL003W	TAF4	P50105	388 aa		4.1	□□□□□ -1.75
CFD1	YIL003W	COX18	P53239	316 aa		4.1	□□□□□ -1.75
CFD1	YIL003W	VPS62	P53285	467 aa		4.1	□□□□□ -1.75
CFD1	YIL003W	MEP3	P53390	489 aa		4.1	□□□□□ -1.75
CFD1	YIL003W	YNR071C	P53757	342 aa		4.1	□□□□□ -1.75
CFD1	YIL003W	REC102	Q02721	264 aa		4.1	□□□□□ -1.75
CFD1	YIL003W	NSE5	Q03718	556 aa		4.1	□□□□□ -1.75
CFD1	YIL003W	HMO1	Q03973	246 aa	Known RBP	4.1	□□□□□ -1.75
CFD1	YIL003W	ACK1	Q07622	623 aa	Predicted RBP	4.1	□□□□□ -1.75
CFD1	YIL003W	GPB1	Q08886	897 aa		4.1	□□□□□ -1.75
CFD1	YIL003W	YDR056C	Q12025	205 aa		4.1	□□□□□ -1.75
CFD1	YIL003W	NTO1	Q12311	748 aa		4.1	□□□□□ -1.75
CFD1	YIL003W	DBP10	Q12389	995 aa	Known RBP	4.1	□□□□□ -1.75
CFD1	YIL003W	ENT1	Q12518	454 aa		4.1	□□□□□ -1.75
CFD1	YIL003W	VPS5	Q92331	675 aa		4.1	□□□□□ -1.75
CFD1	YIL003W	NCP1	P16603	691 aa	Known RBP	4.09	□□□□□ -1.75
CFD1	YIL003W	ERG6	P25087	383 aa	Known RBP	4.09	□□□□□ -1.75
CFD1	YIL003W	CHS3	P29465	1165 aa		4.09	□□□□□ -1.75
CFD1	YIL003W	MTC7	P32633	139 aa		4.09	□□□□□ -1.75
CFD1	YIL003W	LST4	P34239	828 aa		4.09	□□□□□ -1.75
CFD1	YIL003W	PUG1	P40100	303 aa		4.09	□□□□□ -1.75
CFD1	YIL003W	PXA1	P41909	870 aa		4.09	□□□□□ -1.75
CFD1	YIL003W	CPR6	P53691	371 aa	Known RBP	4.09	□□□□□ -1.75
CFD1	YIL003W	CTF4	Q01454	927 aa		4.09	□□□□□ -1.75
CFD1	YIL003W	EIS1	Q05050	843 aa	Known RBP	4.09	□□□□□ -1.75
CFD1	YIL003W	OPY2	Q06810	360 aa		4.09	□□□□□ -1.75
CFD1	YIL003W	NPC2	Q12408	173 aa		4.09	□□□□□ -1.75
CFD1	YIL003W	PHO5	P00635	467 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	RNR1	P21524	888 aa	Known RBP	4.08	□□□□□ -1.76
CFD1	YIL003W	MCM3	P24279	971 aa	Known RBP	4.08	□□□□□ -1.76
CFD1	YIL003W	YCL049C	P25577	312 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	RMA1	P36001	430 aa	Known RBP	4.08	□□□□□ -1.76
CFD1	YIL003W	RRN3	P36070	627 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	APT2	P36973	181 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	TAF5	P38129	798 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	PPE1	P38796	400 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	STT3	P39007	718 aa	Known RBP	4.08	□□□□□ -1.76
CFD1	YIL003W	ECM1	P39715	212 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	AIM21	P40563	679 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	SMK1	P41808	388 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	BIT61	P47041	543 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	BNA1	P47096	177 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	MCM6	P53091	1017 aa	Known RBP	4.08	□□□□□ -1.76
CFD1	YIL003W	PEF1	P53238	335 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	MRPS35	P53292	345 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	TEX1	P53851	422 aa	Known RBP	4.08	□□□□□ -1.76
CFD1	YIL003W	MDM1	Q01846	1127 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	NRG1	Q03125	231 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	YAP6	Q03935	383 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	YMR018W	Q04364	514 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	VBA4	Q04602	768 aa	Known RBP	4.08	□□□□□ -1.76
CFD1	YIL003W	PEX19	Q07418	342 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	ECM3	Q99252	613 aa		4.08	□□□□□ -1.76
CFD1	YIL003W	URA3	P03962	267 aa		4.07	□□□□□ -1.76
CFD1	YIL003W	ERG20	P08524	352 aa	Known RBP	4.07	□□□□□ -1.76
CFD1	YIL003W	HSC82	P15108	705 aa	Known RBP	4.07	□□□□□ -1.76
CFD1	YIL003W	RER1	P25560	188 aa		4.07	□□□□□ -1.76
CFD1	YIL003W	PRE4	P30657	266 aa		4.07	□□□□□ -1.76
CFD1	YIL003W	XRS2	P33301	854 aa		4.07	□□□□□ -1.76
CFD1	YIL003W	YLF2	P38746	405 aa		4.07	□□□□□ -1.76
CFD1	YIL003W	RPP1	P38786	293 aa		4.07	□□□□□ -1.76
CFD1	YIL003W	PRM2	P40534	656 aa		4.07	□□□□□ -1.76
CFD1	YIL003W	NOP9	P47077	666 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms