RNA–Protein interactions for RNA: YHL024W

RIM4, Transcript of Putative RNA-binding protein, yeast

Gene RIM4, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM4	YHL024W	RRP36	Q12481	300 aa	Predicted RBP	4.09	□□□□□ -1.76
RIM4	YHL024W	Q0142	Q9ZZW4	58 aa		4.09	□□□□□ -1.76
RIM4	YHL024W	ARO1	P08566	1588 aa	Known RBP	4.08	□□□□□ -1.76
RIM4	YHL024W	YRF1-4	O13559	1382 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	YML133C	Q03099	1374 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	YLL067C	Q07888	1374 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	YLL066C	Q99208	1374 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	YBT1	P32386	1661 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	TY2B-LR1	P0C2J3	1770 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	TY2B-F	P0CX63	1770 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	TY2B-GR2	P0CX64	1770 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	TY2B-C	P25384	1770 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	TY2B-DR2	Q03494	1770 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	TY1B-DR1	Q03855	1755 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	TY2B-DR3	Q07791	1770 aa	Known RBP	4.08	□□□□□ -1.76
RIM4	YHL024W	TY2B-OR1	Q12113	1770 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	TY2B-DR1	Q12472	1770 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	TY2B-OR2	Q12501	1770 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	HNM1	P19807	563 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	BUD2	P33314	1104 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	BMH2	P34730	273 aa	Known RBP	4.08	□□□□□ -1.76
RIM4	YHL024W	YKR051W	P36142	418 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	HSM3	P38348	480 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	OTU2	P38747	307 aa	Known RBP	4.08	□□□□□ -1.76
RIM4	YHL024W	MSS4	P38994	779 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	DAS1	P47005	663 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	UBC9	P50623	157 aa	Predicted RBP	4.08	□□□□□ -1.76
RIM4	YHL024W	GPG1	P53130	126 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	RRN11	Q04712	507 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	RNH1	Q04740	348 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	ASM4	Q05166	528 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	DBP9	Q06218	594 aa	Known RBP	4.08	□□□□□ -1.76
RIM4	YHL024W	RKM1	Q08961	583 aa	Predicted RBP	4.08	□□□□□ -1.76
RIM4	YHL024W	YKL068W-A	Q3E826	78 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	RAV1	P47104	1357 aa		4.08	□□□□□ -1.76
RIM4	YHL024W	LTE1	P07866	1435 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	HIS3	P06633	220 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
RIM4	YHL024W	PRP22	P24384	1145 aa	Known RBP	4.07	□□□□□ -1.76
RIM4	YHL024W	POL4	P25615	582 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	ANP1	P32629	500 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	LHS1	P36016	881 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	MRPL40	P36534	297 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	SAK1	P38990	1142 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	BNA2	P47125	453 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	EXG2	P52911	562 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	DIP5	P53388	608 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	YML108W	Q03759	105 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	LAS17	Q12446	633 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	SUI3	P09064	285 aa	Known RBP	4.07	□□□□□ -1.76
RIM4	YHL024W	KAR4	P25583	335 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	CCR4	P31384	837 aa	Known RBP	4.07	□□□□□ -1.76
RIM4	YHL024W	PXA2	P34230	853 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	HCS1	P34243	683 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	MIA40	P36046	403 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	HSL7	P38274	827 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
RIM4	YHL024W	RTR1	P40084	226 aa	Predicted RBP	4.07	□□□□□ -1.76
RIM4	YHL024W	PRP31	P49704	494 aa	Predicted RBP	4.07	□□□□□ -1.76
RIM4	YHL024W	ASI2	P53895	289 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	ECM11	Q04110	302 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	MUS81	Q04149	632 aa	Predicted RBP	4.07	□□□□□ -1.76
RIM4	YHL024W	GYL1	Q04322	720 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	MMR1	Q06324	491 aa		4.07	□□□□□ -1.76
RIM4	YHL024W	TSR2	Q06672	205 aa	Known RBP	4.07	□□□□□ -1.76
RIM4	YHL024W	YLR358C	O13565	187 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	TUF1	P02992	437 aa	Known RBP	4.06	□□□□□ -1.76
RIM4	YHL024W	ADH4	P10127	382 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	PMS1	P14242	873 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	TSR4	P25040	408 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	HSP104	P31539	908 aa	Known RBP	4.06	□□□□□ -1.76
RIM4	YHL024W	YEL043W	P32618	956 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	MIC60	P36112	540 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	HEL1	P36113	551 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	FLR1	P38124	548 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	RTS1	P38903	757 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	ESL1	P40456	1118 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	PFA3	P42836	336 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	YJR096W	P47137	282 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	PMT3	P47190	753 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	LSG1	P53145	640 aa	Known RBP	4.06	□□□□□ -1.76
RIM4	YHL024W	NPY1	P53164	384 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	EFM5	P53200	248 aa	Known RBP	4.06	□□□□□ -1.76
RIM4	YHL024W	COP1	P53622	1201 aa	Known RBP	4.06	□□□□□ -1.76
RIM4	YHL024W	ASI1	P54074	624 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	CLU1	Q03690	1277 aa	Known RBP	4.06	□□□□□ -1.76
RIM4	YHL024W	GUD1	Q07729	489 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	YOL057W	Q08225	711 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	TAF3	Q12297	353 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	NOT5	Q12514	560 aa	Predicted RBP	4.06	□□□□□ -1.76
RIM4	YHL024W	TY2B-B	Q12491	1770 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	TEF1	P02994	458 aa	Known RBP	4.06	□□□□□ -1.76
RIM4	YHL024W	SSC1	P0CS90	654 aa	Known RBP	4.06	□□□□□ -1.76
RIM4	YHL024W	BMH1	P29311	267 aa	Known RBP	4.06	□□□□□ -1.76
RIM4	YHL024W	TPS2	P31688	896 aa	Known RBP	4.06	□□□□□ -1.76
RIM4	YHL024W	RPN2	P32565	945 aa	Known RBP	4.06	□□□□□ -1.76
RIM4	YHL024W	SAS3	P34218	831 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	ECM4	P36156	370 aa		4.06	□□□□□ -1.76
RIM4	YHL024W	TRZ1	P36159	838 aa	Predicted RBP	4.06	□□□□□ -1.76
RIM4	YHL024W	TYS1	P36421	394 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms