RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W ZRG17P53735 605 aa6.05□□□□□ -1.44
SKN1YGR143W YNR063WP53749 607 aa6.05□□□□□ -1.44
SKN1YGR143W GIM3P53900 129 aa6.05□□□□□ -1.44
SKN1YGR143W CRF1Q04930 467 aa6.05□□□□□ -1.44
SKN1YGR143W NTG2Q08214 380 aa6.05□□□□□ -1.44
SKN1YGR143W WRS1Q12109 432 aaKnown RBP6.05□□□□□ -1.44
SKN1YGR143W TIF1P10081 395 aaKnown RBP6.04□□□□□ -1.44
SKN1YGR143W POL30P15873 258 aaKnown RBP6.04□□□□□ -1.44
SKN1YGR143W RDS2P19541 446 aaKnown RBP6.04□□□□□ -1.44
SKN1YGR143W PPQ1P32945 549 aa6.04□□□□□ -1.44
SKN1YGR143W KTR2P33550 425 aa6.04□□□□□ -1.44
SKN1YGR143W UBP11P36026 717 aa6.04□□□□□ -1.44
SKN1YGR143W CUE2P36075 443 aaKnown RBP6.04□□□□□ -1.44
SKN1YGR143W AIM10P39965 576 aaKnown RBP6.04□□□□□ -1.44
SKN1YGR143W YJL049WP47048 450 aa6.04□□□□□ -1.44
SKN1YGR143W TOM22P49334 152 aa6.04□□□□□ -1.44
SKN1YGR143W MAL13P53338 473 aa6.04□□□□□ -1.44
SKN1YGR143W RET3P53600 189 aa6.04□□□□□ -1.44
SKN1YGR143W ARC35P53731 342 aaKnown RBP6.04□□□□□ -1.44
SKN1YGR143W CNM67P53865 581 aaKnown RBP6.04□□□□□ -1.44
SKN1YGR143W SEN54Q02825 467 aaPredicted RBP6.04□□□□□ -1.44
SKN1YGR143W SRL4Q03085 281 aa6.04□□□□□ -1.44
SKN1YGR143W BUL2Q03758 920 aaKnown RBP6.04□□□□□ -1.44
SKN1YGR143W YPD1Q07688 167 aa6.04□□□□□ -1.44
SKN1YGR143W YEH2Q07950 538 aa6.04□□□□□ -1.44
SKN1YGR143W APL4Q12028 832 aa6.04□□□□□ -1.44
SKN1YGR143W CDC19P00549 500 aaKnown RBP6.04□□□□□ -1.44
SKN1YGR143W PRR1P28708 518 aa6.04□□□□□ -1.44
SKN1YGR143W KTR3P38130 404 aaPredicted RBP6.04□□□□□ -1.44
SKN1YGR143W POP7P38291 140 aa6.04□□□□□ -1.44
SKN1YGR143W PEX32P38292 413 aa6.04□□□□□ -1.44
SKN1YGR143W YMR262WP38430 313 aa6.04□□□□□ -1.44
SKN1YGR143W TDA3P38758 523 aa6.04□□□□□ -1.44
SKN1YGR143W SAW1P39735 261 aa6.04□□□□□ -1.44
SKN1YGR143W GPD2P41911 440 aaKnown RBP6.04□□□□□ -1.44
SKN1YGR143W GYP8P43570 497 aa6.04□□□□□ -1.44
SKN1YGR143W YFH7P43591 353 aa6.04□□□□□ -1.44
SKN1YGR143W UBP6P43593 499 aaKnown RBP6.04□□□□□ -1.44
SKN1YGR143W MTC3P53077 123 aa6.04□□□□□ -1.44
SKN1YGR143W MCM6P53091 1017 aaKnown RBP6.04□□□□□ -1.44
SKN1YGR143W YNL146WP53906 100 aa6.04□□□□□ -1.44
SKN1YGR143W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
SKN1YGR143W REC8Q12188 680 aa6.04□□□□□ -1.44
SKN1YGR143W SNU23Q12368 194 aaPredicted RBP6.04□□□□□ -1.44
SKN1YGR143W ADF1Q2V2Q1 113 aa6.04□□□□□ -1.44
SKN1YGR143W SRN2Q99176 213 aa6.04□□□□□ -1.44
SKN1YGR143W GSC2P40989 1895 aa6.03□□□□□ -1.44
SKN1YGR143W HIS4P00815 799 aaKnown RBP6.03□□□□□ -1.44
SKN1YGR143W IPP1P00817 287 aaKnown RBP6.03□□□□□ -1.44
SKN1YGR143W CMD1P06787 147 aaKnown RBP6.03□□□□□ -1.44
SKN1YGR143W CBP1P07252 654 aa6.03□□□□□ -1.44
SKN1YGR143W PBS2P08018 668 aa6.03□□□□□ -1.44
SKN1YGR143W FRS2P15625 503 aaKnown RBP6.03□□□□□ -1.44
SKN1YGR143W OM45P16547 393 aa6.03□□□□□ -1.44
SKN1YGR143W PRP4P20053 465 aaKnown RBP6.03□□□□□ -1.44
SKN1YGR143W CLB2P24869 491 aa6.03□□□□□ -1.44
SKN1YGR143W RAD57P25301 460 aa6.03□□□□□ -1.44
SKN1YGR143W NPP1P25353 742 aa6.03□□□□□ -1.44
SKN1YGR143W ZIP1P31111 875 aa6.03□□□□□ -1.44
SKN1YGR143W PYC2P32327 1180 aaKnown RBP6.03□□□□□ -1.44
SKN1YGR143W SDS22P36047 338 aa6.03□□□□□ -1.44
SKN1YGR143W COS111P38308 924 aa6.03□□□□□ -1.44
SKN1YGR143W DED81P38707 554 aaKnown RBP6.03□□□□□ -1.44
SKN1YGR143W UTP9P38882 575 aaKnown RBP6.03□□□□□ -1.44
SKN1YGR143W NOG1Q02892 647 aaKnown RBP6.03□□□□□ -1.44
SKN1YGR143W YDR090CQ03193 310 aa6.03□□□□□ -1.44
SKN1YGR143W YDR514CQ04408 483 aa6.03□□□□□ -1.44
SKN1YGR143W INM2Q05533 292 aa6.03□□□□□ -1.44
SKN1YGR143W ADY3Q07732 790 aa6.03□□□□□ -1.44
SKN1YGR143W RTR2Q12378 196 aa6.03□□□□□ -1.44
SKN1YGR143W STE12P13574 688 aa6.03□□□□□ -1.44
SKN1YGR143W SWI4P25302 1093 aaKnown RBP6.03□□□□□ -1.44
SKN1YGR143W PTC3P34221 468 aaKnown RBP6.03□□□□□ -1.44
SKN1YGR143W YKL100CP34248 587 aa6.03□□□□□ -1.44
SKN1YGR143W GLG1P36143 616 aa6.03□□□□□ -1.44
SKN1YGR143W YAP1801P38856 637 aa6.03□□□□□ -1.44
SKN1YGR143W POP2P39008 433 aa6.03□□□□□ -1.44
SKN1YGR143W SAE2P46946 345 aa6.03□□□□□ -1.44
SKN1YGR143W TMA22P47089 198 aaPredicted RBP6.03□□□□□ -1.44
SKN1YGR143W ABM1P47146 123 aa6.03□□□□□ -1.44
SKN1YGR143W HGH1P48362 394 aaKnown RBP6.03□□□□□ -1.44
SKN1YGR143W CGR1P53188 120 aa6.03□□□□□ -1.44
SKN1YGR143W UTP8P53276 713 aaKnown RBP6.03□□□□□ -1.44
SKN1YGR143W ZPR1P53303 486 aaKnown RBP6.03□□□□□ -1.44
SKN1YGR143W MNT4P53745 580 aa6.03□□□□□ -1.44
SKN1YGR143W CST9Q06032 482 aa6.03□□□□□ -1.44
SKN1YGR143W OSW1Q08692 278 aa6.03□□□□□ -1.44
SKN1YGR143W RRI2Q12348 645 aa6.03□□□□□ -1.44
SKN1YGR143W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
SKN1YGR143W KIN1P13185 1064 aa6.02□□□□□ -1.45
SKN1YGR143W SRO9P25567 434 aaKnown RBP6.02□□□□□ -1.45
SKN1YGR143W TFB1P32776 642 aa6.02□□□□□ -1.45
SKN1YGR143W BCH2P36122 765 aa6.02□□□□□ -1.45
SKN1YGR143W SOH1P38633 127 aa6.02□□□□□ -1.45
SKN1YGR143W PNT1P38969 423 aa6.02□□□□□ -1.45
SKN1YGR143W CCT6P39079 546 aa6.02□□□□□ -1.45
SKN1YGR143W QRI1P43123 477 aaKnown RBP6.02□□□□□ -1.45
SKN1YGR143W YGL117WP53133 265 aa6.02□□□□□ -1.45
SKN1YGR143W PRO2P54885 456 aaKnown RBP6.02□□□□□ -1.45
SKN1YGR143W GCN5Q03330 439 aa6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms