RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W YLL058WQ12198 575 aa3.8□□□□□ -1.8
CAF130YGR134W Q0142Q9ZZW4 58 aa3.8□□□□□ -1.8
CAF130YGR134W PAN1P32521 1480 aa3.79□□□□□ -1.8
CAF130YGR134W GEA2P39993 1459 aaKnown RBP3.79□□□□□ -1.8
CAF130YGR134W LCB1P25045 558 aaKnown RBP3.79□□□□□ -1.8
CAF130YGR134W SWI4P25302 1093 aaKnown RBP3.79□□□□□ -1.8
CAF130YGR134W TGL1P34163 548 aa3.79□□□□□ -1.8
CAF130YGR134W AKL1P38080 1108 aaKnown RBP3.79□□□□□ -1.8
CAF130YGR134W SEC28P40509 296 aaKnown RBP3.79□□□□□ -1.8
CAF130YGR134W LYS14P40971 790 aa3.79□□□□□ -1.8
CAF130YGR134W THI6P41835 540 aa3.79□□□□□ -1.8
CAF130YGR134W LOC1P43586 204 aaPredicted RBP3.79□□□□□ -1.8
CAF130YGR134W SHE10P53075 577 aa3.79□□□□□ -1.8
CAF130YGR134W ARV1Q06541 321 aa3.79□□□□□ -1.8
CAF130YGR134W CSR1Q06705 408 aaKnown RBP3.79□□□□□ -1.8
CAF130YGR134W IWR1Q07532 353 aaPredicted RBP3.79□□□□□ -1.8
CAF130YGR134W CHS5Q12114 671 aaKnown RBP3.79□□□□□ -1.8
CAF130YGR134W SPE4Q12455 300 aa3.79□□□□□ -1.8
CAF130YGR134W CDC4P07834 779 aa3.79□□□□□ -1.8
CAF130YGR134W BET2P20133 325 aa3.79□□□□□ -1.8
CAF130YGR134W SEC65P29478 273 aa3.79□□□□□ -1.8
CAF130YGR134W COY1P34237 679 aa3.79□□□□□ -1.8
CAF130YGR134W KSP1P38691 1029 aaKnown RBP3.79□□□□□ -1.8
CAF130YGR134W NPR3P38742 1146 aa3.79□□□□□ -1.8
CAF130YGR134W TDA3P38758 523 aa3.79□□□□□ -1.8
CAF130YGR134W CCT6P39079 546 aa3.79□□□□□ -1.8
CAF130YGR134W MEF2P39677 819 aa3.79□□□□□ -1.8
CAF130YGR134W VID28P40547 921 aa3.79□□□□□ -1.8
CAF130YGR134W MET28P40573 187 aa3.79□□□□□ -1.8
CAF130YGR134W LAM5P43560 674 aa3.79□□□□□ -1.8
CAF130YGR134W BST1P43571 1029 aa3.79□□□□□ -1.8
CAF130YGR134W YDL183CP48569 320 aa3.79□□□□□ -1.8
CAF130YGR134W DUO1P53168 247 aaKnown RBP3.79□□□□□ -1.8
CAF130YGR134W HDA1P53973 706 aa3.79□□□□□ -1.8
CAF130YGR134W PEX25Q02969 394 aa3.79□□□□□ -1.8
CAF130YGR134W ARX1Q03862 593 aaKnown RBP3.79□□□□□ -1.8
CAF130YGR134W DPB4Q04603 196 aaKnown RBP3.79□□□□□ -1.8
CAF130YGR134W PHO92Q06390 306 aa3.79□□□□□ -1.8
CAF130YGR134W STP4Q07351 490 aa3.79□□□□□ -1.8
CAF130YGR134W PDH1Q12428 516 aaKnown RBP3.79□□□□□ -1.8
CAF130YGR134W SEC3P33332 1336 aaKnown RBP3.79□□□□□ -1.8
CAF130YGR134W CET1O13297 549 aaPredicted RBP3.79□□□□□ -1.8
CAF130YGR134W DED1P06634 604 aaKnown RBP3.79□□□□□ -1.8
CAF130YGR134W AFT1P22149 690 aa3.79□□□□□ -1.8
CAF130YGR134W AAR2P32357 355 aaPredicted RBP3.79□□□□□ -1.8
CAF130YGR134W LSB6P42951 607 aa3.79□□□□□ -1.8
CAF130YGR134W BNA2P47125 453 aa3.79□□□□□ -1.8
CAF130YGR134W UTP22P53254 1237 aaPredicted RBP3.79□□□□□ -1.8
CAF130YGR134W YGR266WP53326 701 aa3.79□□□□□ -1.8
CAF130YGR134W OAZ1Q02803 292 aa3.79□□□□□ -1.8
CAF130YGR134W BMS1Q08965 1183 aaKnown RBP3.79□□□□□ -1.8
CAF130YGR134W FRE6Q12473 712 aa3.79□□□□□ -1.8
CAF130YGR134W ADE2P21264 571 aaKnown RBP3.78□□□□□ -1.8
CAF130YGR134W MRPL25P23369 157 aa3.78□□□□□ -1.8
CAF130YGR134W MRP20P32387 263 aa3.78□□□□□ -1.8
CAF130YGR134W TAF5P38129 798 aa3.78□□□□□ -1.8
CAF130YGR134W MCM7P38132 845 aa3.78□□□□□ -1.8
CAF130YGR134W MET18P40469 1032 aa3.78□□□□□ -1.8
CAF130YGR134W AGX1P43567 385 aa3.78□□□□□ -1.8
CAF130YGR134W ULI1P43604 169 aa3.78□□□□□ -1.8
CAF130YGR134W ALT1P52893 592 aa3.78□□□□□ -1.8
CAF130YGR134W PPT1P53043 513 aa3.78□□□□□ -1.8
CAF130YGR134W ERB1Q04660 807 aaKnown RBP3.78□□□□□ -1.8
CAF130YGR134W PML1Q07930 204 aaPredicted RBP3.78□□□□□ -1.8
CAF130YGR134W GPB1Q08886 897 aa3.78□□□□□ -1.8
CAF130YGR134W OM45P16547 393 aa3.78□□□□□ -1.8
CAF130YGR134W SNF5P18480 905 aa3.78□□□□□ -1.8
CAF130YGR134W RTS1P38903 757 aa3.78□□□□□ -1.8
CAF130YGR134W BFR1P38934 470 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
CAF130YGR134W YMR018WQ04364 514 aa3.78□□□□□ -1.8
CAF130YGR134W MSC3Q05812 728 aa3.78□□□□□ -1.8
CAF130YGR134W YLR407WQ06070 228 aa3.78□□□□□ -1.8
CAF130YGR134W MLH2Q07980 695 aa3.78□□□□□ -1.8
CAF130YGR134W PDR12Q02785 1511 aa3.78□□□□□ -1.8
CAF130YGR134W VAS1P07806 1104 aaKnown RBP3.77□□□□□ -1.81
CAF130YGR134W FUN30P31380 1131 aa3.77□□□□□ -1.81
CAF130YGR134W SLC1P33333 303 aa3.77□□□□□ -1.81
CAF130YGR134W CDS1P38221 457 aa3.77□□□□□ -1.81
CAF130YGR134W STU2P46675 888 aa3.77□□□□□ -1.81
CAF130YGR134W AIP1P46680 615 aaKnown RBP3.77□□□□□ -1.81
CAF130YGR134W CCM1P48237 864 aaPredicted RBP3.77□□□□□ -1.81
CAF130YGR134W RPA190P10964 1664 aaKnown RBP3.77□□□□□ -1.81
CAF130YGR134W ADE3P07245 946 aaKnown RBP3.77□□□□□ -1.81
CAF130YGR134W RPC40P07703 335 aaKnown RBP3.77□□□□□ -1.81
CAF130YGR134W NIP1P32497 812 aaKnown RBP3.77□□□□□ -1.81
CAF130YGR134W LAS1P36146 502 aaPredicted RBP3.77□□□□□ -1.81
CAF130YGR134W CST26P38226 397 aa3.77□□□□□ -1.81
CAF130YGR134W CTM1P38818 585 aa3.77□□□□□ -1.81
CAF130YGR134W OSW5P40219 148 aa3.77□□□□□ -1.81
CAF130YGR134W ROK1P45818 564 aaPredicted RBP3.77□□□□□ -1.81
CAF130YGR134W EFM3P47163 339 aa3.77□□□□□ -1.81
CAF130YGR134W GPD1Q00055 391 aaKnown RBP3.77□□□□□ -1.81
CAF130YGR134W RPA49Q01080 415 aaPredicted RBP3.77□□□□□ -1.81
CAF130YGR134W TOF2Q02208 771 aa3.77□□□□□ -1.81
CAF130YGR134W YHM2Q04013 314 aa3.77□□□□□ -1.81
CAF130YGR134W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
CAF130YGR134W RCL1Q08096 367 aaPredicted RBP3.77□□□□□ -1.81
CAF130YGR134W MDM38Q08179 573 aa3.77□□□□□ -1.81
CAF130YGR134W CTI6Q08923 506 aa3.77□□□□□ -1.81
CAF130YGR134W MNE1P24720 663 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms