RNA–Protein interactions for RNA: YFL007W

BLM10, Transcript of Proteasome activator, yeast

Gene BLM10, Length 6,432 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BLM10	YFL007W	POP2	P39008	433 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	UBP5	P39944	805 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	BUD16	P39988	312 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	ALK1	P43633	760 aa	Known RBP	4.8	□□□□□ -1.64
BLM10	YFL007W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
BLM10	YFL007W	RUB1	Q03919	77 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	YLR271W	Q06152	274 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	SHS1	Q07657	551 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	RTT10	Q08924	1013 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	HUA2	Q12134	243 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	YGL041W-A	P0C5N3	154 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	SAR1	P20606	190 aa	Known RBP	4.8	□□□□□ -1.64
BLM10	YFL007W	ADE2	P21264	571 aa	Known RBP	4.8	□□□□□ -1.64
BLM10	YFL007W	RPA135	P22138	1203 aa	Known RBP	4.8	□□□□□ -1.64
BLM10	YFL007W	PRD1	P25375	712 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	PEP3	P27801	918 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	KRE6	P32486	720 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	KAP122	P32767	1081 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	RFS1	P38234	210 aa	Known RBP	4.8	□□□□□ -1.64
BLM10	YFL007W	SOP4	P39543	234 aa	Predicted RBP	4.8	□□□□□ -1.64
BLM10	YFL007W	VID27	P40157	782 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	FPK1	P53739	893 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	VAN1	P23642	535 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	YPT52	P36018	234 aa	Known RBP	4.8	□□□□□ -1.64
BLM10	YFL007W	TAE1	P38340	232 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	YHR078W	P38799	552 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	NUP60	P39705	539 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	NDE1	P40215	560 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	CIR1	P42940	261 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	NPA3	P47122	385 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	SLD3	P53135	668 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	YGR125W	P53273	1036 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	SEC5	P89102	971 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	PKR1	Q03880	122 aa	Known RBP	4.8	□□□□□ -1.64
BLM10	YFL007W	RQC1	Q05468	723 aa	Known RBP	4.8	□□□□□ -1.64
BLM10	YFL007W	GRS2	Q06817	618 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	BUD3	P25558	1636 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	CDC8	P00572	216 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	RAD6	P06104	172 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	SAM1	P10659	382 aa	Known RBP	4.8	□□□□□ -1.64
BLM10	YFL007W	RHB1	P25378	209 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	CCC2	P38995	1004 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	SIP4	P46954	829 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	LSM8	P47093	109 aa	Known RBP	4.8	□□□□□ -1.64
BLM10	YFL007W	OGG1	P53397	376 aa	Predicted RBP	4.8	□□□□□ -1.64
BLM10	YFL007W	TMA20	P89886	181 aa	Predicted RBP	4.8	□□□□□ -1.64
BLM10	YFL007W	VPS64	Q03944	604 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	GIM5	Q04493	163 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	LAP2	Q10740	671 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	SNU23	Q12368	194 aa	Predicted RBP	4.8	□□□□□ -1.64
BLM10	YFL007W	RGS2	Q99188	309 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	RPL24A	P04449	155 aa	Known RBP	4.8	□□□□□ -1.64
BLM10	YFL007W	YBR071W	P38243	211 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	YHL050C	P38721	697 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	MGS1	P40151	587 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	YAR1	P46683	200 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	VPS70	P47161	811 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	SNF12	P53628	566 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	HEF3	P53978	1044 aa	Known RBP	4.8	□□□□□ -1.64
BLM10	YFL007W	NKP2	Q06162	153 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	FEX2	Q08991	375 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	REX3	Q12090	404 aa		4.8	□□□□□ -1.64
BLM10	YFL007W	HOM3	P10869	527 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	MDL1	P33310	695 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	THO1	P40040	218 aa	Known RBP	4.79	□□□□□ -1.64
BLM10	YFL007W	MAM1	P40065	302 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	YNL181W	P53878	407 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	REC102	Q02721	264 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
BLM10	YFL007W	SPO75	Q07798	868 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	GRX6	Q12438	231 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	UTR1	P21373	530 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	STE11	P23561	717 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	RNA15	P25299	296 aa	Predicted RBP	4.79	□□□□□ -1.64
BLM10	YFL007W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	RIP-Chip
BLM10	YFL007W	ALT1	P52893	592 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	OKP1	P53298	406 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	PRP22	P24384	1145 aa	Known RBP	4.79	□□□□□ -1.64
BLM10	YFL007W	FMP23	P38231	175 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	SMF2	P38778	549 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	YJL068C	P40363	299 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	YMR027W	Q04371	470 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	PDR18	P53756	1333 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	ISY1	P21374	235 aa	Predicted RBP	4.79	□□□□□ -1.64
BLM10	YFL007W	NPT1	P39683	429 aa	Known RBP	4.79	□□□□□ -1.64
BLM10	YFL007W	FLC2	P39719	783 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	MAG2	Q06436	670 aa	Known RBP	4.79	□□□□□ -1.64
BLM10	YFL007W	FEX1	Q08913	375 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	LYS21	Q12122	440 aa	Known RBP	4.79	□□□□□ -1.64
BLM10	YFL007W	GET4	Q12125	312 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	SPT3	P06844	337 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	MDL2	P33311	773 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	LOS1	P33418	1100 aa	Predicted RBP	4.79	□□□□□ -1.64
BLM10	YFL007W	UBP11	P36026	717 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	FCY21	P40039	528 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	HXT8	P40886	569 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	OYE2	Q03558	400 aa	Known RBP	4.79	□□□□□ -1.64
BLM10	YFL007W	YEH2	Q07950	538 aa		4.79	□□□□□ -1.64
BLM10	YFL007W	DIS3	Q08162	1001 aa	Known RBP	4.79	□□□□□ -1.64
BLM10	YFL007W	KIN28	P06242	306 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms