RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W URA3P03962 267 aa3.91□□□□□ -1.78
SEC4YFL005W TOP1P04786 769 aa3.91□□□□□ -1.78
SEC4YFL005W ADH4P10127 382 aa3.91□□□□□ -1.78
SEC4YFL005W MSH1P25846 959 aa3.91□□□□□ -1.78
SEC4YFL005W EHT1P38295 451 aa3.91□□□□□ -1.78
SEC4YFL005W CBR1P38626 284 aaKnown RBP3.91□□□□□ -1.78
SEC4YFL005W YLF2P38746 405 aa3.91□□□□□ -1.78
SEC4YFL005W PCL5P38794 229 aa3.91□□□□□ -1.78
SEC4YFL005W SWD1P39706 426 aa3.91□□□□□ -1.78
SEC4YFL005W YEL025CP39991 1188 aa3.91□□□□□ -1.78
SEC4YFL005W ARG2P40360 574 aa3.91□□□□□ -1.78
SEC4YFL005W YGR151CP53287 111 aa3.91□□□□□ -1.78
SEC4YFL005W SMX3P54999 86 aaPredicted RBP3.91□□□□□ -1.78
SEC4YFL005W CEF1Q03654 590 aaPredicted RBP3.91□□□□□ -1.78
SEC4YFL005W ATG16Q03818 150 aa3.91□□□□□ -1.78
SEC4YFL005W YSH1Q06224 779 aaPredicted RBP3.91□□□□□ -1.78
SEC4YFL005W ARR3Q06598 404 aa3.91□□□□□ -1.78
SEC4YFL005W USV1Q12132 391 aa3.91□□□□□ -1.78
SEC4YFL005W SEC12P11655 471 aa3.9□□□□□ -1.79
SEC4YFL005W PHO81P17442 1178 aa3.9□□□□□ -1.79
SEC4YFL005W VPS33P20795 691 aa3.9□□□□□ -1.79
SEC4YFL005W ARG1P22768 420 aa3.9□□□□□ -1.79
SEC4YFL005W PTH2P34222 208 aa3.9□□□□□ -1.79
SEC4YFL005W YHR097CP38809 366 aaKnown RBP3.9□□□□□ -1.79
SEC4YFL005W YJL193WP39542 402 aa3.9□□□□□ -1.79
SEC4YFL005W ACA1P39970 489 aa3.9□□□□□ -1.79
SEC4YFL005W VPS27P40343 622 aaKnown RBP3.9□□□□□ -1.79
SEC4YFL005W LRO1P40345 661 aa3.9□□□□□ -1.79
SEC4YFL005W NDC80P40460 691 aa3.9□□□□□ -1.79
SEC4YFL005W CTR1P49573 406 aa3.9□□□□□ -1.79
SEC4YFL005W YGR054WP53235 642 aaKnown RBP3.9□□□□□ -1.79
SEC4YFL005W TIM50Q02776 476 aa3.9□□□□□ -1.79
SEC4YFL005W HBT1Q07653 1046 aaKnown RBP3.9□□□□□ -1.79
SEC4YFL005W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
SEC4YFL005W DHR2P36009 735 aaPredicted RBP3.89□□□□□ -1.79
SEC4YFL005W SET3P36124 751 aa3.89□□□□□ -1.79
SEC4YFL005W APL3P38065 1025 aa3.89□□□□□ -1.79
SEC4YFL005W PPE1P38796 400 aa3.89□□□□□ -1.79
SEC4YFL005W IES5P40060 125 aa3.89□□□□□ -1.79
SEC4YFL005W IMA5P40884 581 aa3.89□□□□□ -1.79
SEC4YFL005W MAD3P47074 515 aa3.89□□□□□ -1.79
SEC4YFL005W YGR021WP53212 290 aa3.89□□□□□ -1.79
SEC4YFL005W HOF1Q05080 669 aa3.89□□□□□ -1.79
SEC4YFL005W AFT2Q08957 416 aa3.89□□□□□ -1.79
SEC4YFL005W PEX2P32800 271 aa3.88□□□□□ -1.79
SEC4YFL005W ELF1P36053 145 aa3.88□□□□□ -1.79
SEC4YFL005W GLG1P36143 616 aa3.88□□□□□ -1.79
SEC4YFL005W MRPL7P36519 292 aa3.88□□□□□ -1.79
SEC4YFL005W APM3P38153 483 aa3.88□□□□□ -1.79
SEC4YFL005W FUI1P38196 639 aa3.88□□□□□ -1.79
SEC4YFL005W UBS1P38290 277 aa3.88□□□□□ -1.79
SEC4YFL005W KSP1P38691 1029 aaKnown RBP3.88□□□□□ -1.79
SEC4YFL005W SDS3P40505 327 aa3.88□□□□□ -1.79
SEC4YFL005W GSM1P42950 618 aa3.88□□□□□ -1.79
SEC4YFL005W DIP5P53388 608 aa3.88□□□□□ -1.79
SEC4YFL005W EFR3Q03653 782 aaKnown RBP3.88□□□□□ -1.79
SEC4YFL005W HIM1Q06674 414 aa3.88□□□□□ -1.79
SEC4YFL005W CRD1Q07560 283 aa3.88□□□□□ -1.79
SEC4YFL005W PSR2Q07949 397 aa3.88□□□□□ -1.79
SEC4YFL005W BMS1Q08965 1183 aaKnown RBP3.88□□□□□ -1.79
SEC4YFL005W PCK1P10963 549 aa3.87□□□□□ -1.79
SEC4YFL005W SEC18P18759 758 aaKnown RBP3.87□□□□□ -1.79
SEC4YFL005W DPB3P27344 201 aa3.87□□□□□ -1.79
SEC4YFL005W PRP45P28004 379 aaPredicted RBP3.87□□□□□ -1.79
SEC4YFL005W CAP1P28495 268 aaKnown RBP3.87□□□□□ -1.79
SEC4YFL005W GMH1P36125 273 aa3.87□□□□□ -1.79
SEC4YFL005W THI6P41835 540 aa3.87□□□□□ -1.79
SEC4YFL005W NMA2P53204 395 aa3.87□□□□□ -1.79
SEC4YFL005W SNF12P53628 566 aa3.87□□□□□ -1.79
SEC4YFL005W MOT3P54785 490 aaKnown RBP3.87□□□□□ -1.79
SEC4YFL005W DAK1P54838 584 aaKnown RBP3.87□□□□□ -1.79
SEC4YFL005W UFO1Q04511 668 aa3.87□□□□□ -1.79
SEC4YFL005W COQ11Q05892 277 aa3.87□□□□□ -1.79
SEC4YFL005W AAD4Q07747 329 aa3.87□□□□□ -1.79
SEC4YFL005W RKI1Q12189 258 aa3.87□□□□□ -1.79
SEC4YFL005W APA1P16550 321 aaKnown RBP3.86□□□□□ -1.79
SEC4YFL005W MSM1P22438 575 aa3.86□□□□□ -1.79
SEC4YFL005W TRX2P22803 104 aaKnown RBP3.86□□□□□ -1.79
SEC4YFL005W DBF20P32328 564 aa3.86□□□□□ -1.79
SEC4YFL005W DSS4P32601 143 aa3.86□□□□□ -1.79
SEC4YFL005W MRS6P32864 603 aaKnown RBP3.86□□□□□ -1.79
SEC4YFL005W STT3P39007 718 aaKnown RBP3.86□□□□□ -1.79
SEC4YFL005W RPT2P40327 437 aaKnown RBP3.86□□□□□ -1.79
SEC4YFL005W ACS1Q01574 713 aa3.86□□□□□ -1.79
SEC4YFL005W EIS1Q05050 843 aaKnown RBP3.86□□□□□ -1.79
SEC4YFL005W MRH1Q12117 320 aaPredicted RBP3.86□□□□□ -1.79
SEC4YFL005W ICT1Q12385 394 aa3.86□□□□□ -1.79
SEC4YFL005W SIR1P21691 654 aa3.85□□□□□ -1.79
SEC4YFL005W MCM3P24279 971 aaKnown RBP3.85□□□□□ -1.79
SEC4YFL005W BDH2P39713 417 aa3.85□□□□□ -1.79
SEC4YFL005W SPC72P39723 622 aa3.85□□□□□ -1.79
SEC4YFL005W VFA1P40080 203 aa3.85□□□□□ -1.79
SEC4YFL005W CCT7P42943 550 aaKnown RBP3.85□□□□□ -1.79
SEC4YFL005W CPR6P53691 371 aaKnown RBP3.85□□□□□ -1.79
SEC4YFL005W ENT2Q05785 613 aa3.85□□□□□ -1.79
SEC4YFL005W IWR1Q07532 353 aaPredicted RBP3.85□□□□□ -1.79
SEC4YFL005W TAF3Q12297 353 aa3.85□□□□□ -1.79
SEC4YFL005W LAM4P38800 1345 aa3.85□□□□□ -1.79
SEC4YFL005W PHO5P00635 467 aa3.84□□□□□ -1.79
SEC4YFL005W MIS1P09440 975 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms