RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C DSD1P53095 428 aa6.96□□□□□ -1.3
SHO1YER118C HDA1P53973 706 aa6.96□□□□□ -1.3
SHO1YER118C RSF1Q05043 376 aa6.96□□□□□ -1.3
SHO1YER118C AAD4Q07747 329 aa6.96□□□□□ -1.3
SHO1YER118C GRX6Q12438 231 aa6.96□□□□□ -1.3
SHO1YER118C RPS9AO13516 197 aaKnown RBP6.95□□□□□ -1.3
SHO1YER118C TPK1P06244 397 aa6.95□□□□□ -1.3
SHO1YER118C APE1P14904 514 aa6.95□□□□□ -1.3
SHO1YER118C PWP1P21304 576 aaKnown RBP6.95□□□□□ -1.3
SHO1YER118C SPB1P25582 841 aaPredicted RBP6.95□□□□□ -1.3
SHO1YER118C STB6P36085 766 aa6.95□□□□□ -1.3
SHO1YER118C FSH1P38777 243 aaKnown RBP6.95□□□□□ -1.3
SHO1YER118C PRK1P40494 810 aa6.95□□□□□ -1.3
SHO1YER118C CCT7P42943 550 aaKnown RBP6.95□□□□□ -1.3
SHO1YER118C SHE10P53075 577 aa6.95□□□□□ -1.3
SHO1YER118C ALF1P53904 254 aa6.95□□□□□ -1.3
SHO1YER118C ADA2Q02336 434 aa6.95□□□□□ -1.3
SHO1YER118C YMR210WQ03649 449 aa6.95□□□□□ -1.3
SHO1YER118C YLL054CQ12244 843 aa6.95□□□□□ -1.3
SHO1YER118C YOL159C-AQ3E769 90 aa6.95□□□□□ -1.3
SHO1YER118C NOT3P06102 836 aaKnown RBP6.94□□□□□ -1.3
SHO1YER118C DAL80P26343 269 aa6.94□□□□□ -1.3
SHO1YER118C RPC82P32349 654 aa6.94□□□□□ -1.3
SHO1YER118C MAC1P35192 417 aa6.94□□□□□ -1.3
SHO1YER118C APE3P37302 537 aaKnown RBP6.94□□□□□ -1.3
SHO1YER118C AKL1P38080 1108 aaKnown RBP6.94□□□□□ -1.3
SHO1YER118C POA1P38218 177 aa6.94□□□□□ -1.3
SHO1YER118C GND1P38720 489 aaKnown RBP6.94□□□□□ -1.3
SHO1YER118C FLC2P39719 783 aa6.94□□□□□ -1.3
SHO1YER118C FMP10P40098 244 aa6.94□□□□□ -1.3
SHO1YER118C THI6P41835 540 aa6.94□□□□□ -1.3
SHO1YER118C YJR098CP47139 656 aa6.94□□□□□ -1.3
SHO1YER118C BNI5P53890 448 aaKnown RBP6.94□□□□□ -1.3
SHO1YER118C ERV25P54837 211 aaKnown RBP6.94□□□□□ -1.3
SHO1YER118C ECM22Q05958 814 aaPredicted RBP6.94□□□□□ -1.3
SHO1YER118C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
SHO1YER118C RCN2Q12044 265 aa6.94□□□□□ -1.3
SHO1YER118C NMD4Q12129 218 aa6.94□□□□□ -1.3
SHO1YER118C YOR022CQ12204 715 aa6.94□□□□□ -1.3
SHO1YER118C COX17Q12287 69 aa6.94□□□□□ -1.3
SHO1YER118C YMR084WA2P2R3 262 aa6.93□□□□□ -1.3
SHO1YER118C CLB1P24868 471 aa6.93□□□□□ -1.3
SHO1YER118C IMG2P25642 146 aaPredicted RBP6.93□□□□□ -1.3
SHO1YER118C PEP3P27801 918 aa6.93□□□□□ -1.3
SHO1YER118C MRP20P32387 263 aa6.93□□□□□ -1.3
SHO1YER118C SWH1P35845 1188 aa6.93□□□□□ -1.3
SHO1YER118C CEP3P40969 608 aa6.93□□□□□ -1.3
SHO1YER118C BST1P43571 1029 aa6.93□□□□□ -1.3
SHO1YER118C BUD27P43573 796 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
SHO1YER118C YJL045WP47052 634 aa6.93□□□□□ -1.3
SHO1YER118C JJJ1P53863 590 aa6.93□□□□□ -1.3
SHO1YER118C LEE1Q02799 301 aaKnown RBP6.93□□□□□ -1.3
SHO1YER118C GAD1Q04792 585 aa6.93□□□□□ -1.3
SHO1YER118C YPS7Q06325 596 aa6.93□□□□□ -1.3
SHO1YER118C CHD1P32657 1468 aa6.92□□□□□ -1.3
SHO1YER118C YLR302CO13544 120 aa6.92□□□□□ -1.3
SHO1YER118C TUB2P02557 457 aaKnown RBP6.92□□□□□ -1.3
SHO1YER118C SNF5P18480 905 aa6.92□□□□□ -1.3
SHO1YER118C ARP2P32381 391 aaKnown RBP6.92□□□□□ -1.3
SHO1YER118C PPQ1P32945 549 aa6.92□□□□□ -1.3
SHO1YER118C LRG1P35688 1017 aa6.92□□□□□ -1.3
SHO1YER118C YHR131CP38835 850 aa6.92□□□□□ -1.3
SHO1YER118C SSU1P41930 458 aa6.92□□□□□ -1.3
SHO1YER118C BRE2P43132 505 aa6.92□□□□□ -1.3
SHO1YER118C NOP9P47077 666 aaKnown RBP6.92□□□□□ -1.3
SHO1YER118C SOK2P53438 785 aaPredicted RBP6.92□□□□□ -1.3
SHO1YER118C TOF1P53840 1238 aa6.92□□□□□ -1.3
SHO1YER118C FDC1Q03034 503 aa6.92□□□□□ -1.3
SHO1YER118C NGL3Q03210 505 aa6.92□□□□□ -1.3
SHO1YER118C GIS4Q04233 774 aa6.92□□□□□ -1.3
SHO1YER118C YMR074CQ04773 145 aa6.92□□□□□ -1.3
SHO1YER118C CRD1Q07560 283 aa6.92□□□□□ -1.3
SHO1YER118C ENT4Q07872 247 aa6.92□□□□□ -1.3
SHO1YER118C HRK1Q08732 759 aaKnown RBP6.92□□□□□ -1.3
SHO1YER118C SAC3P46674 1301 aa6.92□□□□□ -1.3
SHO1YER118C PCK1P10963 549 aa6.91□□□□□ -1.3
SHO1YER118C BIK1P11709 440 aa6.91□□□□□ -1.3
SHO1YER118C MDH1P17505 334 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
SHO1YER118C YCK1P23291 538 aa6.91□□□□□ -1.3
SHO1YER118C GYP6P32806 458 aa6.91□□□□□ -1.3
SHO1YER118C SIF2P38262 535 aa6.91□□□□□ -1.3
SHO1YER118C LYS9P38999 446 aa6.91□□□□□ -1.3
SHO1YER118C PSD1P39006 500 aa6.91□□□□□ -1.3
SHO1YER118C YIL161WP40449 235 aaKnown RBP6.91□□□□□ -1.3
SHO1YER118C ZIM17P42844 174 aa6.91□□□□□ -1.3
SHO1YER118C GCV2P49095 1034 aa6.91□□□□□ -1.3
SHO1YER118C TNA1P53322 534 aa6.91□□□□□ -1.3
SHO1YER118C ACS1Q01574 713 aa6.91□□□□□ -1.3
SHO1YER118C YKR011CQ02209 353 aa6.91□□□□□ -1.3
SHO1YER118C RCO1Q04779 684 aa6.91□□□□□ -1.3
SHO1YER118C STP4Q07351 490 aa6.91□□□□□ -1.3
SHO1YER118C CFT2Q12102 859 aaPredicted RBP6.91□□□□□ -1.3
SHO1YER118C ATG11Q12527 1178 aa6.91□□□□□ -1.3
SHO1YER118C CDC19P00549 500 aaKnown RBP6.9□□□□□ -1.3
SHO1YER118C RPB2P08518 1224 aaKnown RBP6.9□□□□□ -1.3
SHO1YER118C CBS1P14066 229 aa6.9□□□□□ -1.3
SHO1YER118C PRP28P23394 588 aa6.9□□□□□ -1.3
SHO1YER118C CAP1P28495 268 aaKnown RBP6.9□□□□□ -1.3
SHO1YER118C YBL029WP38201 376 aa6.9□□□□□ -1.3
SHO1YER118C MIP6P38760 659 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms