RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	TAH11	P47112	604 aa		3.14	□□□□□ -1.91
TFB1	YDR311W	NCS6	P53088	359 aa		3.14	□□□□□ -1.91
TFB1	YDR311W	MDR1	P53258	950 aa		3.14	□□□□□ -1.91
TFB1	YDR311W	MRPL19	P53875	158 aa		3.14	□□□□□ -1.91
TFB1	YDR311W	GPB1	Q08886	897 aa		3.14	□□□□□ -1.91
TFB1	YDR311W	RRG1	Q12167	365 aa	Predicted RBP	3.14	□□□□□ -1.91
TFB1	YDR311W	SWM1	Q12379	170 aa		3.14	□□□□□ -1.91
TFB1	YDR311W	HSH49	Q99181	213 aa	Predicted RBP	3.14	□□□□□ -1.91
TFB1	YDR311W	SEM1	O94742	89 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	ARP2	P32381	391 aa	Known RBP	3.13	□□□□□ -1.91
TFB1	YDR311W	EHT1	P38295	451 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	SIC1	P38634	284 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	NPR3	P38742	1146 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	FTR1	P40088	404 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	IRC6	P43615	237 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	MET12	P46151	657 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	PSP1	P50896	841 aa	Known RBP	3.13	□□□□□ -1.91
TFB1	YDR311W	YLR287C	Q05881	355 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	RGC1	Q06108	1083 aa	Known RBP	3.13	□□□□□ -1.91
TFB1	YDR311W	MCM21	Q06675	368 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	CRD1	Q07560	283 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	COX17	Q12287	69 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	HRP1	Q99383	534 aa	Known RBP	3.13	□□□□□ -1.91
TFB1	YDR311W	ERG20	P08524	352 aa	Known RBP	3.13	□□□□□ -1.91
TFB1	YDR311W	PCK1	P10963	549 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
TFB1	YDR311W	SWI3	P32591	825 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	YBR225W	P38321	900 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	YBR259W	P38338	688 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	STB5	P38699	743 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	ETP1	P38748	585 aa	Known RBP	3.13	□□□□□ -1.91
TFB1	YDR311W	GET2	P40056	285 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	CAB2	P40506	365 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	RMD8	P43620	662 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	IMA1	P53051	589 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	PRP43	P53131	767 aa	Known RBP	3.13	□□□□□ -1.91
TFB1	YDR311W	SPN1	Q06505	410 aa	Predicted RBP	3.13	□□□□□ -1.91
TFB1	YDR311W	YCG1	Q06680	1035 aa		3.13	□□□□□ -1.91
TFB1	YDR311W	PGS1	P25578	521 aa		3.12	□□□□□ -1.91
TFB1	YDR311W	TEF4	P36008	412 aa	Known RBP	3.12	□□□□□ -1.91
TFB1	YDR311W	MRPL36	P36531	177 aa		3.12	□□□□□ -1.91
TFB1	YDR311W	RPP1	P38786	293 aa		3.12	□□□□□ -1.91
TFB1	YDR311W	CCT3	P39077	534 aa	Known RBP	3.12	□□□□□ -1.91
TFB1	YDR311W	NPR2	P39923	615 aa		3.12	□□□□□ -1.91
TFB1	YDR311W	FAF1	P40546	346 aa	Predicted RBP	3.12	□□□□□ -1.91
TFB1	YDR311W	GPD2	P41911	440 aa	Known RBP	3.12	□□□□□ -1.91
TFB1	YDR311W	BST1	P43571	1029 aa		3.12	□□□□□ -1.91
TFB1	YDR311W	CHA4	P43634	648 aa		3.12	□□□□□ -1.91
TFB1	YDR311W	SIP4	P46954	829 aa		3.12	□□□□□ -1.91
TFB1	YDR311W	FOL2	P51601	243 aa	Known RBP	3.12	□□□□□ -1.91
TFB1	YDR311W	TEX1	P53851	422 aa	Known RBP	3.12	□□□□□ -1.91
TFB1	YDR311W	MRPL22	P53881	309 aa		3.12	□□□□□ -1.91
TFB1	YDR311W	TIM50	Q02776	476 aa		3.12	□□□□□ -1.91
TFB1	YDR311W	SYF1	Q04048	859 aa	Predicted RBP	3.12	□□□□□ -1.91
TFB1	YDR311W	UTP21	Q06078	939 aa	Predicted RBP	3.12	□□□□□ -1.91
TFB1	YDR311W	TGL5	Q12043	749 aa		3.12	□□□□□ -1.91
TFB1	YDR311W	SCM3	Q12334	223 aa		3.12	□□□□□ -1.91
TFB1	YDR311W	POM34	Q12445	299 aa		3.12	□□□□□ -1.91
TFB1	YDR311W	RPS9B	P05755	195 aa	Known RBP	3.11	□□□□□ -1.91
TFB1	YDR311W	HIS5	P07172	385 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	CDC6	P09119	513 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	TUP1	P16649	713 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	FUR1	P18562	216 aa	Known RBP	3.11	□□□□□ -1.91
TFB1	YDR311W	PRP6	P19735	899 aa	Predicted RBP	3.11	□□□□□ -1.91
TFB1	YDR311W	RPS7A	P26786	190 aa	Known RBP	3.11	□□□□□ -1.91
TFB1	YDR311W	RAD16	P31244	790 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	VMA8	P32610	256 aa	Known RBP	3.11	□□□□□ -1.91
TFB1	YDR311W	CNS1	P33313	385 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	SFB3	P38810	929 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	FMP10	P40098	244 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	COG1	P53079	417 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	YGR250C	P53316	781 aa	Known RBP	3.11	□□□□□ -1.91
TFB1	YDR311W	BSC5	P53755	489 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	PPN1	Q04119	674 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	MFB1	Q04922	465 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	ADY4	Q05955	493 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	PEX19	Q07418	342 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	HMI1	Q12039	706 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	SUL2	Q12325	893 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	SUI3	P09064	285 aa	Known RBP	3.11	□□□□□ -1.91
TFB1	YDR311W	OLE1	P21147	510 aa	Known RBP	3.11	□□□□□ -1.91
TFB1	YDR311W	PRP22	P24384	1145 aa	Known RBP	3.11	□□□□□ -1.91
TFB1	YDR311W	SGF29	P25554	259 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	EMC1	P25574	760 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	ECM32	P32644	1121 aa	Known RBP	3.11	□□□□□ -1.91
TFB1	YDR311W	TOA1	P32773	286 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	APT2	P36973	181 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	FSH1	P38777	243 aa	Known RBP	3.11	□□□□□ -1.91
TFB1	YDR311W	LYS9	P38999	446 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	PSD1	P39006	500 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	VFA1	P40080	203 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	MTL1	P53214	551 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	YPL071C	Q02864	156 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	TRS31	Q03337	283 aa		3.11	□□□□□ -1.91
TFB1	YDR311W	PGA3	Q12746	312 aa	Known RBP	3.11	□□□□□ -1.91
TFB1	YDR311W	MET17	P06106	444 aa		3.1	□□□□□ -1.91
TFB1	YDR311W	TPK1	P06244	397 aa		3.1	□□□□□ -1.91
TFB1	YDR311W	RPL19A	P0CX82	189 aa	Known RBP	3.1	□□□□□ -1.91
TFB1	YDR311W	RPL19B	P0CX83	189 aa	Predicted RBP	3.1	□□□□□ -1.91
TFB1	YDR311W	BIK1	P11709	440 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 125.1 ms