RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W ACO1P19414 778 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
CDC36YDL165W YKU70P32807 602 aa2.22□□□□□ -2.05
CDC36YDL165W LOT5P34234 306 aa2.22□□□□□ -2.05
CDC36YDL165W YPT10P38146 199 aa2.22□□□□□ -2.05
CDC36YDL165W BUD8P41698 603 aa2.22□□□□□ -2.05
CDC36YDL165W TES1P41903 349 aaKnown RBP2.22□□□□□ -2.05
CDC36YDL165W SPO1P53541 631 aa2.22□□□□□ -2.05
CDC36YDL165W RTT103Q05543 409 aa2.22□□□□□ -2.05
CDC36YDL165W HRD3Q05787 833 aa2.22□□□□□ -2.05
CDC36YDL165W TGS1Q12052 315 aa2.22□□□□□ -2.05
CDC36YDL165W ERR1P0CX10 437 aa2.21□□□□□ -2.06
CDC36YDL165W ERR2P0CX11 437 aa2.21□□□□□ -2.06
CDC36YDL165W GSY1P23337 708 aa2.21□□□□□ -2.06
CDC36YDL165W MEF1P25039 761 aa2.21□□□□□ -2.06
CDC36YDL165W COQ3P27680 312 aa2.21□□□□□ -2.06
CDC36YDL165W YJU2P28320 278 aaPredicted RBP2.21□□□□□ -2.06
CDC36YDL165W BRN1P38170 754 aa2.21□□□□□ -2.06
CDC36YDL165W SLX1P38324 304 aa2.21□□□□□ -2.06
CDC36YDL165W CRG1P38892 291 aaRIP-Chip data2.21□□□□□ -2.06not detected
CDC36YDL165W DSS1P39112 969 aa2.21□□□□□ -2.06
CDC36YDL165W YIL092WP40497 633 aa2.21□□□□□ -2.06
CDC36YDL165W PXA1P41909 870 aa2.21□□□□□ -2.06
CDC36YDL165W AIM14P53109 570 aa2.21□□□□□ -2.06
CDC36YDL165W YPS7Q06325 596 aa2.21□□□□□ -2.06
CDC36YDL165W ATG33Q06485 197 aa2.21□□□□□ -2.06
CDC36YDL165W UBX3Q12229 455 aa2.21□□□□□ -2.06
CDC36YDL165W HOP1P20050 605 aa2.2□□□□□ -2.06
CDC36YDL165W FMP46P36141 133 aaKnown RBP2.2□□□□□ -2.06
CDC36YDL165W YBR139WP38109 508 aa2.2□□□□□ -2.06
CDC36YDL165W SNU71P53207 620 aaKnown RBP2.2□□□□□ -2.06
CDC36YDL165W YMR210WQ03649 449 aa2.2□□□□□ -2.06
CDC36YDL165W YMR317WQ04893 1140 aa2.2□□□□□ -2.06
CDC36YDL165W YLR407WQ06070 228 aa2.2□□□□□ -2.06
CDC36YDL165W DSE3Q08729 430 aa2.2□□□□□ -2.06
CDC36YDL165W YMR230W-AQ3E7B5 62 aa2.2□□□□□ -2.06
CDC36YDL165W BI2P03873 423 aa2.19□□□□□ -2.06
CDC36YDL165W RPT3P33298 428 aaKnown RBP2.19□□□□□ -2.06
CDC36YDL165W DHR2P36009 735 aaPredicted RBP2.19□□□□□ -2.06
CDC36YDL165W YKR075CP36155 307 aa2.19□□□□□ -2.06
CDC36YDL165W PAM1P37304 830 aaKnown RBP2.19□□□□□ -2.06
CDC36YDL165W FTR1P40088 404 aa2.19□□□□□ -2.06
CDC36YDL165W SKP2P42843 763 aa2.19□□□□□ -2.06
CDC36YDL165W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
CDC36YDL165W ATX2Q12067 313 aa2.19□□□□□ -2.06
CDC36YDL165W CAP1P28495 268 aaKnown RBP2.18□□□□□ -2.06
CDC36YDL165W PRE4P30657 266 aa2.18□□□□□ -2.06
CDC36YDL165W CCL1P37366 393 aa2.18□□□□□ -2.06
CDC36YDL165W USA1Q03714 838 aa2.18□□□□□ -2.06
CDC36YDL165W PPN1Q04119 674 aa2.18□□□□□ -2.06
CDC36YDL165W HLR1Q04429 423 aa2.18□□□□□ -2.06
CDC36YDL165W COG8Q04632 607 aa2.18□□□□□ -2.06
CDC36YDL165W YMR034CQ05131 434 aaPredicted RBP2.18□□□□□ -2.06
CDC36YDL165W GIN4Q12263 1142 aa2.18□□□□□ -2.06
CDC36YDL165W MAL31P38156 614 aa2.17□□□□□ -2.06
CDC36YDL165W CDS1P38221 457 aa2.17□□□□□ -2.06
CDC36YDL165W PCM1P38628 557 aaKnown RBP2.17□□□□□ -2.06
CDC36YDL165W HOS2P53096 452 aaPredicted RBP2.17□□□□□ -2.06
CDC36YDL165W STP4Q07351 490 aa2.17□□□□□ -2.06
CDC36YDL165W CYK3Q07533 885 aa2.17□□□□□ -2.06
CDC36YDL165W MLH2Q07980 695 aa2.17□□□□□ -2.06
CDC36YDL165W GAL4P04386 881 aa2.16□□□□□ -2.06
CDC36YDL165W PCL2P25693 308 aa2.16□□□□□ -2.06
CDC36YDL165W YEL025CP39991 1188 aa2.16□□□□□ -2.06
CDC36YDL165W CHZ1P40019 153 aaPredicted RBP2.16□□□□□ -2.06
CDC36YDL165W YIL169CP40442 995 aa2.16□□□□□ -2.06
CDC36YDL165W AHA1Q12449 350 aaKnown RBP2.16□□□□□ -2.06
CDC36YDL165W CET1O13297 549 aaPredicted RBP2.15□□□□□ -2.07
CDC36YDL165W IMD2P38697 523 aaKnown RBP2.15□□□□□ -2.07
CDC36YDL165W IMD3P50095 523 aaKnown RBP2.15□□□□□ -2.07
CDC36YDL165W SNU56Q03782 492 aaKnown RBP2.15□□□□□ -2.07
CDC36YDL165W SMA2Q04658 369 aa2.15□□□□□ -2.07
CDC36YDL165W ARR3Q06598 404 aa2.15□□□□□ -2.07
CDC36YDL165W PNO1Q99216 274 aaKnown RBP2.15□□□□□ -2.07
CDC36YDL165W AAC1P04710 309 aa2.14□□□□□ -2.07
CDC36YDL165W MAK32P23060 363 aa2.14□□□□□ -2.07
CDC36YDL165W TOM71P38825 639 aaKnown RBP2.14□□□□□ -2.07
CDC36YDL165W VRG4P40107 337 aa2.14□□□□□ -2.07
CDC36YDL165W CDC53Q12018 815 aaKnown RBP2.14□□□□□ -2.07
CDC36YDL165W SCO2P38072 301 aa2.13□□□□□ -2.07
CDC36YDL165W EHT1P38295 451 aa2.13□□□□□ -2.07
CDC36YDL165W FTH1P38310 465 aa2.13□□□□□ -2.07
CDC36YDL165W LRO1P40345 661 aa2.13□□□□□ -2.07
CDC36YDL165W PRM2P40534 656 aa2.13□□□□□ -2.07
CDC36YDL165W CIN1P40987 1014 aa2.13□□□□□ -2.07
CDC36YDL165W TAF4P50105 388 aa2.13□□□□□ -2.07
CDC36YDL165W VTC3Q02725 835 aa2.13□□□□□ -2.07
CDC36YDL165W RPS17AP02407 136 aaKnown RBP2.12□□□□□ -2.07
CDC36YDL165W YFL068WP0CX99 160 aa2.12□□□□□ -2.07
CDC36YDL165W YLL066W-AP0CY00 160 aa2.12□□□□□ -2.07
CDC36YDL165W YLL067W-AP0CY01 160 aa2.12□□□□□ -2.07
CDC36YDL165W RPS17BP14127 136 aaKnown RBP2.12□□□□□ -2.07
CDC36YDL165W SFL1P20134 766 aa2.12□□□□□ -2.07
CDC36YDL165W PPZ1P26570 692 aa2.12□□□□□ -2.07
CDC36YDL165W DHH1P39517 506 aaKnown RBP2.12□□□□□ -2.07
CDC36YDL165W NSE3Q05541 303 aa2.12□□□□□ -2.07
CDC36YDL165W SWI6P09959 803 aa2.11□□□□□ -2.07
CDC36YDL165W STI1P15705 589 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
CDC36YDL165W SAD1P43589 448 aa2.11□□□□□ -2.07
CDC36YDL165W BFA1P47113 574 aa2.11□□□□□ -2.07
CDC36YDL165W ILS1P09436 1072 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 121.4 ms