RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	DCG1	P32460	244 aa		6.22	□□□□□ -1.41
RPN5	YDL147W	NPR3	P38742	1146 aa		6.22	□□□□□ -1.41
RPN5	YDL147W	NOC2	P39744	710 aa	Known RBP	6.22	□□□□□ -1.41
RPN5	YDL147W	VFA1	P40080	203 aa		6.22	□□□□□ -1.41
RPN5	YDL147W	CAB2	P40506	365 aa		6.22	□□□□□ -1.41
RPN5	YDL147W	SAP4	P53036	818 aa		6.22	□□□□□ -1.41
RPN5	YDL147W	ARC35	P53731	342 aa	Known RBP	6.22	□□□□□ -1.41
RPN5	YDL147W	CHS5	Q12114	671 aa	Known RBP	6.22	□□□□□ -1.41
RPN5	YDL147W	MTF2	P10849	440 aa		6.21	□□□□□ -1.42
RPN5	YDL147W	TUP1	P16649	713 aa		6.21	□□□□□ -1.42
RPN5	YDL147W	UBC1	P21734	215 aa	Known RBP	6.21	□□□□□ -1.42
RPN5	YDL147W	YBR053C	P38235	358 aa		6.21	□□□□□ -1.42
RPN5	YDL147W	YEL025C	P39991	1188 aa		6.21	□□□□□ -1.42
RPN5	YDL147W	TMN3	P40071	706 aa		6.21	□□□□□ -1.42
RPN5	YDL147W	RRI2	Q12348	645 aa		6.21	□□□□□ -1.42
RPN5	YDL147W	LAS17	Q12446	633 aa		6.21	□□□□□ -1.42
RPN5	YDL147W	LEU2	P04173	364 aa	Predicted RBP	6.2	□□□□□ -1.42
RPN5	YDL147W	NCP1	P16603	691 aa	Known RBP	6.2	□□□□□ -1.42
RPN5	YDL147W	RIT1	P23796	513 aa		6.2	□□□□□ -1.42
RPN5	YDL147W	RAD16	P31244	790 aa		6.2	□□□□□ -1.42
RPN5	YDL147W	EHT1	P38295	451 aa		6.2	□□□□□ -1.42
RPN5	YDL147W	BCD1	P38772	366 aa		6.2	□□□□□ -1.42
RPN5	YDL147W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	6.2	□□□□□ -1.42	not detected
RPN5	YDL147W	YDL183C	P48569	320 aa		6.2	□□□□□ -1.42
RPN5	YDL147W	UBC11	P52492	156 aa		6.2	□□□□□ -1.42
RPN5	YDL147W	ATG21	Q02887	496 aa		6.2	□□□□□ -1.42
RPN5	YDL147W	VPS64	Q03944	604 aa		6.2	□□□□□ -1.42
RPN5	YDL147W	ENT2	Q05785	613 aa		6.2	□□□□□ -1.42
RPN5	YDL147W	AIM39	Q08223	395 aa		6.2	□□□□□ -1.42
RPN5	YDL147W	YOL087C	Q99247	1116 aa		6.2	□□□□□ -1.42
RPN5	YDL147W	ADE3	P07245	946 aa	Known RBP	6.19	□□□□□ -1.42
RPN5	YDL147W	YJL193W	P39542	402 aa		6.19	□□□□□ -1.42
RPN5	YDL147W	RFX1	P48743	811 aa		6.19	□□□□□ -1.42
RPN5	YDL147W	VPS33	P20795	691 aa		6.18	□□□□□ -1.42
RPN5	YDL147W	ERG4	P25340	473 aa		6.18	□□□□□ -1.42
RPN5	YDL147W	YCR015C	P25616	317 aa		6.18	□□□□□ -1.42
RPN5	YDL147W	YJL163C	P46996	555 aa		6.18	□□□□□ -1.42
RPN5	YDL147W	MEP3	P53390	489 aa		6.18	□□□□□ -1.42
RPN5	YDL147W	CSR1	Q06705	408 aa	Known RBP	6.18	□□□□□ -1.42
RPN5	YDL147W	IRC13	Q08630	104 aa		6.18	□□□□□ -1.42
RPN5	YDL147W	FRE5	Q08908	694 aa		6.18	□□□□□ -1.42
RPN5	YDL147W	YKL033W-A	Q86ZR7	236 aa		6.18	□□□□□ -1.42
RPN5	YDL147W	INH1	P01097	85 aa		6.17	□□□□□ -1.42
RPN5	YDL147W	SWI4	P25302	1093 aa	Known RBP	6.17	□□□□□ -1.42
RPN5	YDL147W	SWC3	P31376	625 aa		6.17	□□□□□ -1.42
RPN5	YDL147W	EFT1	P32324	842 aa	Known RBP	6.17	□□□□□ -1.42
RPN5	YDL147W	FRD1	P32614	470 aa	Known RBP	6.17	□□□□□ -1.42
RPN5	YDL147W	DHR2	P36009	735 aa	Predicted RBP	6.17	□□□□□ -1.42
RPN5	YDL147W	FSH1	P38777	243 aa	Known RBP	6.17	□□□□□ -1.42
RPN5	YDL147W	POL31	P46957	487 aa		6.17	□□□□□ -1.42
RPN5	YDL147W	PAN2	P53010	1115 aa	Predicted RBP	6.17	□□□□□ -1.42
RPN5	YDL147W	TIM50	Q02776	476 aa		6.17	□□□□□ -1.42
RPN5	YDL147W	TRS31	Q03337	283 aa		6.17	□□□□□ -1.42
RPN5	YDL147W	YDR056C	Q12025	205 aa		6.17	□□□□□ -1.42
RPN5	YDL147W	PMA1	P05030	918 aa	Known RBP	6.16	□□□□□ -1.42
RPN5	YDL147W	SNF1	P06782	633 aa	Known RBP	6.16	□□□□□ -1.42
RPN5	YDL147W	ABF1	P14164	731 aa		6.16	□□□□□ -1.42
RPN5	YDL147W	HSC82	P15108	705 aa	Known RBP	6.16	□□□□□ -1.42
RPN5	YDL147W	YBR138C	P38277	524 aa		6.16	□□□□□ -1.42
RPN5	YDL147W	FMP52	P40008	231 aa		6.16	□□□□□ -1.42
RPN5	YDL147W	LRO1	P40345	661 aa		6.16	□□□□□ -1.42
RPN5	YDL147W	IDS2	P46958	469 aa		6.16	□□□□□ -1.42
RPN5	YDL147W	MPS3	P47069	682 aa		6.16	□□□□□ -1.42
RPN5	YDL147W	TEL2	P53038	688 aa		6.16	□□□□□ -1.42
RPN5	YDL147W	IMA1	P53051	589 aa		6.16	□□□□□ -1.42
RPN5	YDL147W	YGR054W	P53235	642 aa	Known RBP	6.16	□□□□□ -1.42
RPN5	YDL147W	YAP1802	P53309	568 aa		6.16	□□□□□ -1.42
RPN5	YDL147W	RNT1	Q02555	471 aa		6.16	□□□□□ -1.42
RPN5	YDL147W	VID22	Q05934	901 aa		6.16	□□□□□ -1.42
RPN5	YDL147W	ADY4	Q05955	493 aa		6.16	□□□□□ -1.42
RPN5	YDL147W	ENT1	Q12518	454 aa		6.16	□□□□□ -1.42
RPN5	YDL147W	ARP2	P32381	391 aa	Known RBP	6.15	□□□□□ -1.43
RPN5	YDL147W	DSS4	P32601	143 aa		6.15	□□□□□ -1.43
RPN5	YDL147W	MFT1	P33441	392 aa	Known RBP	6.15	□□□□□ -1.43
RPN5	YDL147W	TEF4	P36008	412 aa	Known RBP	6.15	□□□□□ -1.43
RPN5	YDL147W	CTF18	P49956	741 aa		6.15	□□□□□ -1.43
RPN5	YDL147W	RGC1	Q06108	1083 aa	Known RBP	6.15	□□□□□ -1.43
RPN5	YDL147W	ARR3	Q06598	404 aa		6.15	□□□□□ -1.43
RPN5	YDL147W	ALG7	P07286	448 aa		6.14	□□□□□ -1.43
RPN5	YDL147W	BET2	P20133	325 aa		6.14	□□□□□ -1.43
RPN5	YDL147W	RPS7A	P26786	190 aa	Known RBP	6.14	□□□□□ -1.43
RPN5	YDL147W	GCD7	P32502	381 aa	Predicted RBP	6.14	□□□□□ -1.43
RPN5	YDL147W	PHO11	P35842	467 aa		6.14	□□□□□ -1.43
RPN5	YDL147W	JNM1	P36224	373 aa		6.14	□□□□□ -1.43
RPN5	YDL147W	CTP1	P38152	299 aa		6.14	□□□□□ -1.43
RPN5	YDL147W	IFA38	P38286	347 aa		6.14	□□□□□ -1.43
RPN5	YDL147W	PHO12	P38693	467 aa		6.14	□□□□□ -1.43
RPN5	YDL147W	STB5	P38699	743 aa		6.14	□□□□□ -1.43
RPN5	YDL147W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	6.14	□□□□□ -1.43	not detected
RPN5	YDL147W	KHA1	P40309	873 aa		6.14	□□□□□ -1.43
RPN5	YDL147W	CBK1	P53894	756 aa		6.14	□□□□□ -1.43
RPN5	YDL147W	YPL108W	Q02872	168 aa	Predicted RBP	6.14	□□□□□ -1.43
RPN5	YDL147W	TSR2	Q06672	205 aa	Known RBP	6.14	□□□□□ -1.43
RPN5	YDL147W	TRM8	Q12009	286 aa		6.14	□□□□□ -1.43
RPN5	YDL147W	RTP1	Q12751	981 aa		6.14	□□□□□ -1.43
RPN5	YDL147W	HCM1	P25364	564 aa		6.13	□□□□□ -1.43
RPN5	YDL147W	RNQ1	P25367	405 aa		6.13	□□□□□ -1.43
RPN5	YDL147W	HRR25	P29295	494 aa	Known RBP	6.13	□□□□□ -1.43
RPN5	YDL147W	CNS1	P33313	385 aa		6.13	□□□□□ -1.43
RPN5	YDL147W	BNA1	P47096	177 aa		6.13	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms