RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C TPO2P53283 614 aa5.52□□□□□ -1.53
SCM3YDL139C SOL4P53315 255 aa5.52□□□□□ -1.53
SCM3YDL139C RRB1Q04225 511 aaKnown RBP5.52□□□□□ -1.53
SCM3YDL139C ETT1Q08421 412 aaKnown RBP5.52□□□□□ -1.53
SCM3YDL139C YPL277CQ08989 487 aa5.52□□□□□ -1.53
SCM3YDL139C YDL177CQ12257 170 aa5.52□□□□□ -1.53
SCM3YDL139C CLF1Q12309 687 aaPredicted RBP5.52□□□□□ -1.53
SCM3YDL139C YPR071WQ12346 211 aa5.52□□□□□ -1.53
SCM3YDL139C BI4P03879 638 aa5.51□□□□□ -1.53
SCM3YDL139C SRD1P09007 221 aa5.51□□□□□ -1.53
SCM3YDL139C AFR1P33304 620 aa5.51□□□□□ -1.53
SCM3YDL139C TSA1P34760 196 aaKnown RBP5.51□□□□□ -1.53
SCM3YDL139C MCD4P36051 919 aa5.51□□□□□ -1.53
SCM3YDL139C YRO2P38079 344 aa5.51□□□□□ -1.53
SCM3YDL139C PIK1P39104 1066 aa5.51□□□□□ -1.53
SCM3YDL139C PES4P39684 611 aa5.51□□□□□ -1.53
SCM3YDL139C MAL11P53048 616 aa5.51□□□□□ -1.53
SCM3YDL139C CRD1Q07560 283 aa5.51□□□□□ -1.53
SCM3YDL139C GUD1Q07729 489 aa5.51□□□□□ -1.53
SCM3YDL139C ISA1Q07821 250 aaPredicted RBP5.51□□□□□ -1.53
SCM3YDL139C RPL22AP05749 121 aaKnown RBP5.5□□□□□ -1.53
SCM3YDL139C RPL4AP10664 362 aaKnown RBP5.5□□□□□ -1.53
SCM3YDL139C MTF2P10849 440 aa5.5□□□□□ -1.53
SCM3YDL139C NPP1P25353 742 aa5.5□□□□□ -1.53
SCM3YDL139C SRO9P25567 434 aaKnown RBP5.5□□□□□ -1.53
SCM3YDL139C BCS1P32839 456 aa5.5□□□□□ -1.53
SCM3YDL139C CCZ1P38273 704 aa5.5□□□□□ -1.53
SCM3YDL139C UBP6P43593 499 aaKnown RBP5.5□□□□□ -1.53
SCM3YDL139C RPL4BP49626 362 aaKnown RBP5.5□□□□□ -1.53
SCM3YDL139C PRP31P49704 494 aaPredicted RBP5.5□□□□□ -1.53
SCM3YDL139C FOL2P51601 243 aaKnown RBP5.5□□□□□ -1.53
SCM3YDL139C LSB1P53281 241 aa5.5□□□□□ -1.53
SCM3YDL139C SRP1Q02821 542 aaKnown RBP5.5□□□□□ -1.53
SCM3YDL139C POB3Q04636 552 aaKnown RBP5.5□□□□□ -1.53
SCM3YDL139C CSM3Q04659 317 aa5.5□□□□□ -1.53
SCM3YDL139C SOV1Q04748 898 aa5.5□□□□□ -1.53
SCM3YDL139C HCR1Q05775 265 aaKnown RBP5.5□□□□□ -1.53
SCM3YDL139C PGK1P00560 416 aaKnown RBP5.49□□□□□ -1.53
SCM3YDL139C ADE8P04161 214 aa5.49□□□□□ -1.53
SCM3YDL139C OM45P16547 393 aa5.49□□□□□ -1.53
SCM3YDL139C TKL1P23254 680 aaKnown RBP5.49□□□□□ -1.53
SCM3YDL139C KIN82P25341 720 aa5.49□□□□□ -1.53
SCM3YDL139C CDC48P25694 835 aaKnown RBP5.49□□□□□ -1.53
SCM3YDL139C MSH2P25847 964 aa5.49□□□□□ -1.53
SCM3YDL139C OCT1P35999 772 aa5.49□□□□□ -1.53
SCM3YDL139C MNN4P36044 1178 aa5.49□□□□□ -1.53
SCM3YDL139C TRZ1P36159 838 aaPredicted RBP5.49□□□□□ -1.53
SCM3YDL139C SMF1P38925 575 aa5.49□□□□□ -1.53
SCM3YDL139C YMR124WP39523 943 aaKnown RBP5.49□□□□□ -1.53
SCM3YDL139C GDH3P39708 457 aa5.49□□□□□ -1.53
SCM3YDL139C TPM2P40414 161 aa5.49□□□□□ -1.53
SCM3YDL139C ASG7P46993 209 aa5.49□□□□□ -1.53
SCM3YDL139C HSV2P50079 448 aaPredicted RBP5.49□□□□□ -1.53
SCM3YDL139C RTC4P53850 401 aa5.49□□□□□ -1.53
SCM3YDL139C MRPL22P53881 309 aa5.49□□□□□ -1.53
SCM3YDL139C NGL3Q03210 505 aa5.49□□□□□ -1.53
SCM3YDL139C UTP14Q04500 899 aaKnown RBP5.49□□□□□ -1.53
SCM3YDL139C RSC58Q07979 502 aa5.49□□□□□ -1.53
SCM3YDL139C MLH2Q07980 695 aa5.49□□□□□ -1.53
SCM3YDL139C ZPS1Q12512 249 aa5.49□□□□□ -1.53
SCM3YDL139C COX4P04037 155 aa5.48□□□□□ -1.53
SCM3YDL139C GPI10P30777 616 aa5.48□□□□□ -1.53
SCM3YDL139C EUG1P32474 517 aa5.48□□□□□ -1.53
SCM3YDL139C DOM34P33309 386 aa5.48□□□□□ -1.53
SCM3YDL139C KSP1P38691 1029 aaKnown RBP5.48□□□□□ -1.53
SCM3YDL139C SAP1P39955 897 aaKnown RBP5.48□□□□□ -1.53
SCM3YDL139C NPP2P39997 493 aa5.48□□□□□ -1.53
SCM3YDL139C TOK1P40310 691 aa5.48□□□□□ -1.53
SCM3YDL139C APT1P49435 187 aaKnown RBP5.48□□□□□ -1.53
SCM3YDL139C ORC5P50874 479 aa5.48□□□□□ -1.53
SCM3YDL139C NCS2P53923 493 aaPredicted RBP5.48□□□□□ -1.53
SCM3YDL139C GYL1Q04322 720 aa5.48□□□□□ -1.53
SCM3YDL139C PHM6Q05637 104 aa5.48□□□□□ -1.53
SCM3YDL139C VPS38Q05919 439 aa5.48□□□□□ -1.53
SCM3YDL139C MDM38Q08179 573 aa5.48□□□□□ -1.53
SCM3YDL139C NTG2Q08214 380 aa5.48□□□□□ -1.53
SCM3YDL139C SSB1P11484 613 aaKnown RBP5.47□□□□□ -1.53
SCM3YDL139C GFA1P14742 717 aaKnown RBP5.47□□□□□ -1.53
SCM3YDL139C YSC83P32792 385 aa5.47□□□□□ -1.53
SCM3YDL139C AIM3P38266 947 aaKnown RBP5.47□□□□□ -1.53
SCM3YDL139C GIC1P38785 314 aa5.47□□□□□ -1.53
SCM3YDL139C AFG3P39925 761 aa5.47□□□□□ -1.53
SCM3YDL139C SSB2P40150 613 aaKnown RBP5.47□□□□□ -1.53
SCM3YDL139C YJR142WP47173 342 aa5.47□□□□□ -1.53
SCM3YDL139C BRE5P53741 515 aaKnown RBP5.47□□□□□ -1.53
SCM3YDL139C TIM8P57744 87 aa5.47□□□□□ -1.53
SCM3YDL139C COQ9Q05779 260 aa5.47□□□□□ -1.53
SCM3YDL139C YLR287CQ05881 355 aa5.47□□□□□ -1.53
SCM3YDL139C SFH1Q06168 426 aa5.47□□□□□ -1.53
SCM3YDL139C NBA1Q08229 501 aaKnown RBP5.47□□□□□ -1.53
SCM3YDL139C RSB1Q08417 382 aa5.47□□□□□ -1.53
SCM3YDL139C CFT2Q12102 859 aaPredicted RBP5.47□□□□□ -1.53
SCM3YDL139C RMP1Q12530 201 aa5.47□□□□□ -1.53
SCM3YDL139C SPS1P08458 490 aa5.46□□□□□ -1.54
SCM3YDL139C VMA2P16140 517 aaKnown RBP5.46□□□□□ -1.54
SCM3YDL139C CDC42P19073 191 aa5.46□□□□□ -1.54
SCM3YDL139C CAP1P28495 268 aaKnown RBP5.46□□□□□ -1.54
SCM3YDL139C TSL1P38427 1098 aaKnown RBP5.46□□□□□ -1.54
SCM3YDL139C NCS6P53088 359 aa5.46□□□□□ -1.54
SCM3YDL139C YNL146WP53906 100 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms