RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN4	YDL020C	YGR151C	P53287	111 aa		4.63	□□□□□ -1.67
RPN4	YDL020C	ATG4	P53867	494 aa		4.63	□□□□□ -1.67
RPN4	YDL020C	YSH1	Q06224	779 aa	Predicted RBP	4.63	□□□□□ -1.67
RPN4	YDL020C	ELF1	P36053	145 aa		4.62	□□□□□ -1.67
RPN4	YDL020C	APM3	P38153	483 aa		4.62	□□□□□ -1.67
RPN4	YDL020C	YLF2	P38746	405 aa		4.62	□□□□□ -1.67
RPN4	YDL020C	YHR097C	P38809	366 aa	Known RBP	4.62	□□□□□ -1.67
RPN4	YDL020C	CHS7	P38843	316 aa		4.62	□□□□□ -1.67
RPN4	YDL020C	VPS27	P40343	622 aa	Known RBP	4.62	□□□□□ -1.67
RPN4	YDL020C	LRO1	P40345	661 aa		4.62	□□□□□ -1.67
RPN4	YDL020C	UBA2	P52488	636 aa		4.62	□□□□□ -1.67
RPN4	YDL020C	ACF2	Q12168	779 aa		4.62	□□□□□ -1.67
RPN4	YDL020C	PCK1	P10963	549 aa		4.61	□□□□□ -1.67
RPN4	YDL020C	SEC12	P11655	471 aa		4.61	□□□□□ -1.67
RPN4	YDL020C	VPS33	P20795	691 aa		4.61	□□□□□ -1.67
RPN4	YDL020C	TRX2	P22803	104 aa	Known RBP	4.61	□□□□□ -1.67
RPN4	YDL020C	MRS6	P32864	603 aa	Known RBP	4.61	□□□□□ -1.67
RPN4	YDL020C	PPE1	P38796	400 aa		4.61	□□□□□ -1.67
RPN4	YDL020C	NDC80	P40460	691 aa		4.61	□□□□□ -1.67
RPN4	YDL020C	GSM1	P42950	618 aa		4.61	□□□□□ -1.67
RPN4	YDL020C	SMX3	P54999	86 aa	Predicted RBP	4.61	□□□□□ -1.67
RPN4	YDL020C	CEF1	Q03654	590 aa	Predicted RBP	4.61	□□□□□ -1.67
RPN4	YDL020C	ARR3	Q06598	404 aa		4.61	□□□□□ -1.67
RPN4	YDL020C	DBF20	P32328	564 aa		4.61	□□□□□ -1.67
RPN4	YDL020C	YJL193W	P39542	402 aa		4.61	□□□□□ -1.67
RPN4	YDL020C	RPT2	P40327	437 aa	Known RBP	4.61	□□□□□ -1.67
RPN4	YDL020C	ARG2	P40360	574 aa		4.61	□□□□□ -1.67
RPN4	YDL020C	ACS1	Q01574	713 aa		4.61	□□□□□ -1.67
RPN4	YDL020C	DHR2	P36009	735 aa	Predicted RBP	4.6	□□□□□ -1.67
RPN4	YDL020C	MRPL7	P36519	292 aa		4.6	□□□□□ -1.67
RPN4	YDL020C	APL3	P38065	1025 aa		4.6	□□□□□ -1.67
RPN4	YDL020C	KSP1	P38691	1029 aa	Known RBP	4.6	□□□□□ -1.67
RPN4	YDL020C	STT3	P39007	718 aa	Known RBP	4.6	□□□□□ -1.67
RPN4	YDL020C	CTR1	P49573	406 aa		4.6	□□□□□ -1.67
RPN4	YDL020C	STB4	P50104	949 aa		4.6	□□□□□ -1.67
RPN4	YDL020C	NMA2	P53204	395 aa		4.6	□□□□□ -1.67
RPN4	YDL020C	DIP5	P53388	608 aa		4.6	□□□□□ -1.67
RPN4	YDL020C	EFR3	Q03653	782 aa	Known RBP	4.6	□□□□□ -1.67
RPN4	YDL020C	GSF2	Q04697	403 aa	Known RBP	4.6	□□□□□ -1.67
RPN4	YDL020C	CRD1	Q07560	283 aa		4.6	□□□□□ -1.67
RPN4	YDL020C	HBT1	Q07653	1046 aa	Known RBP	4.6	□□□□□ -1.67
RPN4	YDL020C	AAD4	Q07747	329 aa		4.6	□□□□□ -1.67
RPN4	YDL020C	MSM1	P22438	575 aa		4.59	□□□□□ -1.67
RPN4	YDL020C	SPC72	P39723	622 aa		4.59	□□□□□ -1.67
RPN4	YDL020C	SNF12	P53628	566 aa		4.59	□□□□□ -1.67
RPN4	YDL020C	TIM44	Q01852	431 aa		4.59	□□□□□ -1.67
RPN4	YDL020C	RKI1	Q12189	258 aa		4.59	□□□□□ -1.67
RPN4	YDL020C	PHO5	P00635	467 aa		4.58	□□□□□ -1.68
RPN4	YDL020C	DPB3	P27344	201 aa		4.58	□□□□□ -1.68
RPN4	YDL020C	DSS4	P32601	143 aa		4.58	□□□□□ -1.68
RPN4	YDL020C	UBS1	P38290	277 aa		4.58	□□□□□ -1.68
RPN4	YDL020C	SAP185	P40856	1058 aa		4.58	□□□□□ -1.68
RPN4	YDL020C	UFO1	Q04511	668 aa		4.58	□□□□□ -1.68
RPN4	YDL020C	EIS1	Q05050	843 aa	Known RBP	4.58	□□□□□ -1.68
RPN4	YDL020C	ENT2	Q05785	613 aa		4.58	□□□□□ -1.68
RPN4	YDL020C	PSR2	Q07949	397 aa		4.58	□□□□□ -1.68
RPN4	YDL020C	SIR1	P21691	654 aa		4.57	□□□□□ -1.68
RPN4	YDL020C	MCM3	P24279	971 aa	Known RBP	4.57	□□□□□ -1.68
RPN4	YDL020C	GLG1	P36143	616 aa		4.57	□□□□□ -1.68
RPN4	YDL020C	STB5	P38699	743 aa		4.57	□□□□□ -1.68
RPN4	YDL020C	VFA1	P40080	203 aa		4.57	□□□□□ -1.68
RPN4	YDL020C	POL31	P46957	487 aa		4.57	□□□□□ -1.68
RPN4	YDL020C	SLI1	P53304	468 aa		4.57	□□□□□ -1.68
RPN4	YDL020C	CPR6	P53691	371 aa	Known RBP	4.57	□□□□□ -1.68
RPN4	YDL020C	CTF4	Q01454	927 aa		4.57	□□□□□ -1.68
RPN4	YDL020C	MFM1	Q02783	413 aa		4.57	□□□□□ -1.68
RPN4	YDL020C	HOF1	Q05080	669 aa		4.57	□□□□□ -1.68
RPN4	YDL020C	CIA1	Q05583	330 aa		4.57	□□□□□ -1.68
RPN4	YDL020C	BMS1	Q08965	1183 aa	Known RBP	4.57	□□□□□ -1.68
RPN4	YDL020C	POL3	P15436	1097 aa		4.57	□□□□□ -1.68
RPN4	YDL020C	CAP1	P28495	268 aa	Known RBP	4.57	□□□□□ -1.68
RPN4	YDL020C	GMH1	P36125	273 aa		4.57	□□□□□ -1.68
RPN4	YDL020C	ERR3	P42222	437 aa		4.57	□□□□□ -1.68
RPN4	YDL020C	COS12	P53053	380 aa		4.57	□□□□□ -1.68
RPN4	YDL020C	TRS31	Q03337	283 aa		4.57	□□□□□ -1.68
RPN4	YDL020C	ECM16	Q04217	1267 aa	Known RBP	4.57	□□□□□ -1.68
RPN4	YDL020C	IWR1	Q07532	353 aa	Predicted RBP	4.57	□□□□□ -1.68
RPN4	YDL020C	LAM4	P38800	1345 aa		4.56	□□□□□ -1.68
RPN4	YDL020C	PRP45	P28004	379 aa	Predicted RBP	4.56	□□□□□ -1.68
RPN4	YDL020C	FRD1	P32614	470 aa	Known RBP	4.56	□□□□□ -1.68
RPN4	YDL020C	OAR1	P35731	278 aa		4.56	□□□□□ -1.68
RPN4	YDL020C	MOH1	P38191	138 aa		4.56	□□□□□ -1.68
RPN4	YDL020C	YJL206C	P39529	758 aa		4.56	□□□□□ -1.68
RPN4	YDL020C	SDS3	P40505	327 aa		4.56	□□□□□ -1.68
RPN4	YDL020C	THI6	P41835	540 aa		4.56	□□□□□ -1.68
RPN4	YDL020C	DAK1	P54838	584 aa	Known RBP	4.56	□□□□□ -1.68
RPN4	YDL020C	BLS1	Q06071	122 aa		4.56	□□□□□ -1.68
RPN4	YDL020C	PNS1	Q12412	539 aa		4.56	□□□□□ -1.68
RPN4	YDL020C	MIS1	P09440	975 aa	Known RBP	4.55	□□□□□ -1.68
RPN4	YDL020C	RPS7A	P26786	190 aa	Known RBP	4.55	□□□□□ -1.68
RPN4	YDL020C	EXO84	P38261	753 aa		4.55	□□□□□ -1.68
RPN4	YDL020C	BDH2	P39713	417 aa		4.55	□□□□□ -1.68
RPN4	YDL020C	CCT7	P42943	550 aa	Known RBP	4.55	□□□□□ -1.68
RPN4	YDL020C	SPC98	P53540	846 aa		4.55	□□□□□ -1.68
RPN4	YDL020C	TRS23	Q03784	219 aa		4.55	□□□□□ -1.68
RPN4	YDL020C	VPS64	Q03944	604 aa		4.55	□□□□□ -1.68
RPN4	YDL020C	CTT1	P06115	562 aa		4.54	□□□□□ -1.68
RPN4	YDL020C	STE4	P18851	423 aa		4.54	□□□□□ -1.68
RPN4	YDL020C	VPS34	P22543	875 aa		4.54	□□□□□ -1.68
RPN4	YDL020C	RIT1	P23796	513 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 84.9 ms