RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W MMS4P38257 691 aa8.17□□□□□ -1.1
ABP1YCR088W TDA11P38854 504 aa8.17□□□□□ -1.1
ABP1YCR088W YJL206CP39529 758 aa8.17□□□□□ -1.1
ABP1YCR088W RPT2P40327 437 aaKnown RBP8.17□□□□□ -1.1
ABP1YCR088W SEC27P41811 889 aaKnown RBP8.17□□□□□ -1.1
ABP1YCR088W FAR3P46671 204 aa8.17□□□□□ -1.1
ABP1YCR088W VTC4P47075 721 aa8.17□□□□□ -1.1
ABP1YCR088W NUT1P53114 1132 aa8.17□□□□□ -1.1
ABP1YCR088W MRM2P53123 320 aa8.17□□□□□ -1.1
ABP1YCR088W DOS2P54858 310 aa8.17□□□□□ -1.1
ABP1YCR088W ECM7Q06200 448 aa8.17□□□□□ -1.1
ABP1YCR088W YEL077CQ3E7X8 1277 aa8.17□□□□□ -1.1
ABP1YCR088W MST1P07236 462 aa8.17□□□□□ -1.1
ABP1YCR088W CBF5P33322 483 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
ABP1YCR088W PNT1P38969 423 aa8.17□□□□□ -1.1
ABP1YCR088W ULI1P43604 169 aa8.17□□□□□ -1.1
ABP1YCR088W MIG2P53035 382 aa8.17□□□□□ -1.1
ABP1YCR088W TAN1P53072 289 aaPredicted RBP8.17□□□□□ -1.1
ABP1YCR088W SLT2Q00772 484 aa8.17□□□□□ -1.1
ABP1YCR088W YMR209CQ03648 457 aa8.17□□□□□ -1.1
ABP1YCR088W YET2Q04210 160 aa8.17□□□□□ -1.1
ABP1YCR088W AIM39Q08223 395 aa8.17□□□□□ -1.1
ABP1YCR088W ECM29P38737 1868 aa8.17□□□□□ -1.1
ABP1YCR088W MSD1P15179 658 aaKnown RBP8.16□□□□□ -1.1
ABP1YCR088W PUT4P15380 627 aa8.16□□□□□ -1.1
ABP1YCR088W PRR1P28708 518 aa8.16□□□□□ -1.1
ABP1YCR088W DPH2P32461 534 aa8.16□□□□□ -1.1
ABP1YCR088W CYM1P32898 989 aa8.16□□□□□ -1.1
ABP1YCR088W CUE2P36075 443 aaKnown RBP8.16□□□□□ -1.1
ABP1YCR088W TGL4P36165 910 aa8.16□□□□□ -1.1
ABP1YCR088W RIM2P38127 377 aa8.16□□□□□ -1.1
ABP1YCR088W PPX1P38698 397 aa8.16□□□□□ -1.1
ABP1YCR088W CKB2P38930 258 aa8.16□□□□□ -1.1
ABP1YCR088W AVT2P39981 480 aa8.16□□□□□ -1.1
ABP1YCR088W FMP33P46998 180 aa8.16□□□□□ -1.1
ABP1YCR088W MND1P53102 219 aa8.16□□□□□ -1.1
ABP1YCR088W YGR016WP53209 190 aa8.16□□□□□ -1.1
ABP1YCR088W ADY3Q07732 790 aa8.16□□□□□ -1.1
ABP1YCR088W CUE5Q08412 411 aaKnown RBP8.16□□□□□ -1.1
ABP1YCR088W RUP1Q12242 671 aa8.16□□□□□ -1.1
ABP1YCR088W YLR278CQ05854 1341 aa8.16□□□□□ -1.1
ABP1YCR088W FRE1P32791 686 aa8.15□□□□□ -1.1
ABP1YCR088W STL1P39932 569 aa8.15□□□□□ -1.1
ABP1YCR088W SCS2P40075 244 aaKnown RBP8.15□□□□□ -1.1
ABP1YCR088W MAM33P40513 266 aa8.15□□□□□ -1.1
ABP1YCR088W SCS3P53012 380 aa8.15□□□□□ -1.1
ABP1YCR088W IST1P53843 298 aaPredicted RBP8.15□□□□□ -1.1
ABP1YCR088W ARO80Q04052 950 aa8.15□□□□□ -1.1
ABP1YCR088W APC9Q12107 265 aa8.15□□□□□ -1.1
ABP1YCR088W COX4P04037 155 aa8.15□□□□□ -1.11
ABP1YCR088W VPS34P22543 875 aa8.15□□□□□ -1.11
ABP1YCR088W ABZ1P37254 787 aaPredicted RBP8.15□□□□□ -1.11
ABP1YCR088W PHO89P38361 574 aa8.15□□□□□ -1.11
ABP1YCR088W GGA2P38817 585 aaKnown RBP8.15□□□□□ -1.11
ABP1YCR088W NMD3P38861 518 aaKnown RBP8.15□□□□□ -1.11
ABP1YCR088W ERP2P39704 215 aa8.15□□□□□ -1.11
ABP1YCR088W MAF1P41910 395 aa8.15□□□□□ -1.11
ABP1YCR088W POL31P46957 487 aa8.15□□□□□ -1.11
ABP1YCR088W RTA1P53047 317 aa8.15□□□□□ -1.11
ABP1YCR088W HST2P53686 357 aa8.15□□□□□ -1.11
ABP1YCR088W DIS3Q08162 1001 aaKnown RBP8.15□□□□□ -1.11
ABP1YCR088W SNX3Q08826 162 aaKnown RBP8.15□□□□□ -1.11
ABP1YCR088W TMA46Q12000 345 aaKnown RBP8.15□□□□□ -1.11
ABP1YCR088W SGT2Q12118 346 aaKnown RBP8.15□□□□□ -1.11
ABP1YCR088W PCD1Q12524 340 aa8.15□□□□□ -1.11
ABP1YCR088W TSR4P25040 408 aa8.14□□□□□ -1.11
ABP1YCR088W VBA3P25594 458 aa8.14□□□□□ -1.11
ABP1YCR088W SRB2P34162 210 aa8.14□□□□□ -1.11
ABP1YCR088W VBA5P36172 582 aa8.14□□□□□ -1.11
ABP1YCR088W DIA4P38705 446 aaPredicted RBP8.14□□□□□ -1.11
ABP1YCR088W BEM4P39011 633 aa8.14□□□□□ -1.11
ABP1YCR088W GPB2P39717 880 aa8.14□□□□□ -1.11
ABP1YCR088W VAB2P40003 282 aa8.14□□□□□ -1.11
ABP1YCR088W MGS1P40151 587 aa8.14□□□□□ -1.11
ABP1YCR088W DAN4P47179 1161 aa8.14□□□□□ -1.11
ABP1YCR088W ALT1P52893 592 aa8.14□□□□□ -1.11
ABP1YCR088W FPK1P53739 893 aa8.14□□□□□ -1.11
ABP1YCR088W SNU56Q03782 492 aaKnown RBP8.14□□□□□ -1.11
ABP1YCR088W CDD1Q06549 142 aa8.14□□□□□ -1.11
ABP1YCR088W ASA1Q06822 443 aa8.14□□□□□ -1.11
ABP1YCR088W VPS54Q12071 889 aa8.14□□□□□ -1.11
ABP1YCR088W YPR027CQ12079 277 aa8.14□□□□□ -1.11
ABP1YCR088W SAN1P22470 610 aa8.13□□□□□ -1.11
ABP1YCR088W RAD51P25454 400 aa8.13□□□□□ -1.11
ABP1YCR088W GID7P25569 745 aa8.13□□□□□ -1.11
ABP1YCR088W PDX3P38075 228 aaKnown RBP8.13□□□□□ -1.11
ABP1YCR088W AGP2P38090 596 aa8.13□□□□□ -1.11
ABP1YCR088W YFL040WP43562 540 aa8.13□□□□□ -1.11
ABP1YCR088W PSP2P50109 593 aaKnown RBP8.13□□□□□ -1.11
ABP1YCR088W TVP15Q03860 143 aa8.13□□□□□ -1.11
ABP1YCR088W HMO1Q03973 246 aaKnown RBP8.13□□□□□ -1.11
ABP1YCR088W FAR10Q06001 478 aa8.13□□□□□ -1.11
ABP1YCR088W YLL056CQ12177 298 aa8.13□□□□□ -1.11
ABP1YCR088W CDC19P00549 500 aaKnown RBP8.12□□□□□ -1.11
ABP1YCR088W CHS1P08004 1131 aa8.12□□□□□ -1.11
ABP1YCR088W TUB1P09733 447 aaKnown RBP8.12□□□□□ -1.11
ABP1YCR088W GPA2P10823 449 aa8.12□□□□□ -1.11
ABP1YCR088W SAT4P25333 603 aaKnown RBP8.12□□□□□ -1.11
ABP1YCR088W YUR1P26725 428 aa8.12□□□□□ -1.11
ABP1YCR088W UTR2P32623 467 aa8.12□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms