RNA–Protein interactions for RNA: YBR102C

EXO84, Transcript of Exocyst subunit with dual roles in exocytosis and spliceosome assembly, yeast

Gene EXO84, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EXO84	YBR102C	PSF3	Q12146	194 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	CLB4	P24871	460 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	LCB1	P25045	558 aa	Known RBP	3.18	□□□□□ -1.9
EXO84	YBR102C	NAM7	P30771	971 aa	Known RBP	3.18	□□□□□ -1.9
EXO84	YBR102C	MET22	P32179	357 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	SMI1	P32566	505 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	GCS1	P35197	352 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	NNK1	P36003	928 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	MAE1	P36013	669 aa	Known RBP	3.18	□□□□□ -1.9
EXO84	YBR102C	MIC60	P36112	540 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	YKR018C	P36114	725 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	SSZ1	P38788	538 aa	Known RBP	3.18	□□□□□ -1.9
EXO84	YBR102C	UTP9	P38882	575 aa	Known RBP	3.18	□□□□□ -1.9
EXO84	YBR102C	BUD16	P39988	312 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	YEL025C	P39991	1188 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	AGX1	P43567	385 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	SIP4	P46954	829 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	RAD17	P48581	401 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	FOL2	P51601	243 aa	Known RBP	3.18	□□□□□ -1.9
EXO84	YBR102C	DUO1	P53168	247 aa	Known RBP	3.18	□□□□□ -1.9
EXO84	YBR102C	YNR061C	P53747	219 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	RSF1	Q05043	376 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	ASM4	Q05166	528 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	YSH1	Q06224	779 aa	Predicted RBP	3.18	□□□□□ -1.9
EXO84	YBR102C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
EXO84	YBR102C	YDL176W	Q12027	708 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	TGL5	Q12043	749 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	SKS1	Q12505	502 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	PCD1	Q12524	340 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	YOL159C-A	Q3E769	90 aa		3.18	□□□□□ -1.9
EXO84	YBR102C	MIS1	P09440	975 aa	Known RBP	3.17	□□□□□ -1.9
EXO84	YBR102C	GLN4	P13188	809 aa	Known RBP	3.17	□□□□□ -1.9
EXO84	YBR102C	SAC7	P17121	654 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	BET2	P20133	325 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	HXT4	P32467	576 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	ECM21	P38167	1117 aa	Known RBP	3.17	□□□□□ -1.9
EXO84	YBR102C	ALG14	P38242	237 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	SIF2	P38262	535 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	CCT7	P42943	550 aa	Known RBP	3.17	□□□□□ -1.9
EXO84	YBR102C	LAM5	P43560	674 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	AIP1	P46680	615 aa	Known RBP	3.17	□□□□□ -1.9
EXO84	YBR102C	ALY2	P47029	1046 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	NIT3	P49954	291 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	KEL2	P50090	882 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	BSC5	P53755	489 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	PRO2	P54885	456 aa	Known RBP	3.17	□□□□□ -1.9
EXO84	YBR102C	SDH1	Q00711	640 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	ERB1	Q04660	807 aa	Known RBP	3.17	□□□□□ -1.9
EXO84	YBR102C	SSL1	Q04673	461 aa	Predicted RBP	3.17	□□□□□ -1.9
EXO84	YBR102C	YMR074C	Q04773	145 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	NGL1	Q08213	363 aa	Known RBP	3.17	□□□□□ -1.9
EXO84	YBR102C	BMS1	Q08965	1183 aa	Known RBP	3.17	□□□□□ -1.9
EXO84	YBR102C	VAS1	P07806	1104 aa	Known RBP	3.17	□□□□□ -1.9
EXO84	YBR102C	OM45	P16547	393 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
EXO84	YBR102C	PRP28	P23394	588 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	MGM1	P32266	881 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	GYP6	P32806	458 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	MDL2	P33311	773 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	PCH2	P38126	564 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	SRP68	P38687	599 aa	Known RBP	3.17	□□□□□ -1.9
EXO84	YBR102C	VID28	P40547	921 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	YFL052W	P43551	465 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	MRX6	P48564	524 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	TOF1	P53840	1238 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	CWC21	Q03375	135 aa	Known RBP	3.17	□□□□□ -1.9
EXO84	YBR102C	DBP9	Q06218	594 aa	Known RBP	3.17	□□□□□ -1.9
EXO84	YBR102C	RTK1	Q12100	620 aa	Predicted RBP	3.17	□□□□□ -1.9
EXO84	YBR102C	PHM7	Q12252	991 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	GRX6	Q12438	231 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	NSI1	Q12457	570 aa		3.17	□□□□□ -1.9
EXO84	YBR102C	TPK1	P06244	397 aa		3.16	□□□□□ -1.9
EXO84	YBR102C	SUI3	P09064	285 aa	Known RBP	3.16	□□□□□ -1.9
EXO84	YBR102C	LAT1	P12695	482 aa	Known RBP	3.16	□□□□□ -1.9
EXO84	YBR102C	POL3	P15436	1097 aa		3.16	□□□□□ -1.9
EXO84	YBR102C	IME1	P21190	360 aa		3.16	□□□□□ -1.9
EXO84	YBR102C	SWI4	P25302	1093 aa	Known RBP	3.16	□□□□□ -1.9
EXO84	YBR102C	SPB1	P25582	841 aa	Predicted RBP	3.16	□□□□□ -1.9
EXO84	YBR102C	NIP1	P32497	812 aa	Known RBP	3.16	□□□□□ -1.9
EXO84	YBR102C	ATG19	P35193	415 aa		3.16	□□□□□ -1.9
EXO84	YBR102C	CTF13	P35203	478 aa		3.16	□□□□□ -1.9
EXO84	YBR102C	STB6	P36085	766 aa		3.16	□□□□□ -1.9
EXO84	YBR102C	UME6	P39001	836 aa		3.16	□□□□□ -1.9
EXO84	YBR102C	BEM4	P39011	633 aa		3.16	□□□□□ -1.9
EXO84	YBR102C	CEM1	P39525	442 aa		3.16	□□□□□ -1.9
EXO84	YBR102C	THI6	P41835	540 aa		3.16	□□□□□ -1.9
EXO84	YBR102C	FET5	P43561	622 aa		3.16	□□□□□ -1.9
EXO84	YBR102C	PSP1	P50896	841 aa	Known RBP	3.16	□□□□□ -1.9
EXO84	YBR102C	DSD1	P53095	428 aa		3.16	□□□□□ -1.9
EXO84	YBR102C	SNF12	P53628	566 aa		3.16	□□□□□ -1.9
EXO84	YBR102C	RPT6	Q01939	405 aa	Known RBP	3.16	□□□□□ -1.9
EXO84	YBR102C	TPP1	Q03796	238 aa		3.16	□□□□□ -1.9
EXO84	YBR102C	GYL1	Q04322	720 aa		3.16	□□□□□ -1.9
EXO84	YBR102C	ECM22	Q05958	814 aa	Predicted RBP	3.16	□□□□□ -1.9
EXO84	YBR102C	IWR1	Q07532	353 aa	Predicted RBP	3.16	□□□□□ -1.9
EXO84	YBR102C	PSY3	Q12318	242 aa		3.16	□□□□□ -1.9
EXO84	YBR102C	NOT3	P06102	836 aa	Known RBP	3.16	□□□□□ -1.9
EXO84	YBR102C	RPS4A	P0CX35	261 aa	Known RBP	3.16	□□□□□ -1.9
EXO84	YBR102C	RPS4B	P0CX36	261 aa	Known RBP	3.16	□□□□□ -1.9
EXO84	YBR102C	KAR3	P17119	729 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms