RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 BCO2Q9BYV7 579 aa7.43□□□□□ -1.22
SRP54-211ENST00000556445 NLRP2Q9NX02 1062 aa7.43□□□□□ -1.22
SRP54-211ENST00000556445 ERCC6Q03468 1493 aa7.43□□□□□ -1.22
SRP54-211ENST00000556445 MAOBP27338 520 aa7.42□□□□□ -1.22
SRP54-211ENST00000556445 ZEB1P37275 1124 aaPredicted RBP7.42□□□□□ -1.22
SRP54-211ENST00000556445 EXOSC6Q5RKV6 272 aaKnown RBP7.42□□□□□ -1.22
SRP54-211ENST00000556445 NUTM2GQ5VZR2 741 aa7.42□□□□□ -1.22
SRP54-211ENST00000556445 FAM20CQ8IXL6 584 aa7.42□□□□□ -1.22
SRP54-211ENST00000556445 SART1O43290 800 aaKnown RBP7.41□□□□□ -1.22
SRP54-211ENST00000556445 ECEL1O95672 775 aa7.41□□□□□ -1.22
SRP54-211ENST00000556445 CYP11A1P05108 521 aa7.41□□□□□ -1.22
SRP54-211ENST00000556445 MAPK8P45983 427 aa7.41□□□□□ -1.22
SRP54-211ENST00000556445 FCGRTP55899 365 aa7.41□□□□□ -1.22
SRP54-211ENST00000556445 POU4F3Q15319 338 aa7.41□□□□□ -1.22
SRP54-211ENST00000556445 Q8N3U1 123 aa7.41□□□□□ -1.22
SRP54-211ENST00000556445 FBF1Q8TES7 1133 aa7.41□□□□□ -1.22
SRP54-211ENST00000556445 C7orf69Q9H7B7 122 aa7.41□□□□□ -1.22
SRP54-211ENST00000556445 STOML1Q9UBI4 398 aa7.41□□□□□ -1.22
SRP54-211ENST00000556445 WWC3Q9ULE0 1092 aa7.41□□□□□ -1.22
SRP54-211ENST00000556445 CTTNBP2Q8WZ74 1663 aa7.41□□□□□ -1.22
SRP54-211ENST00000556445 P4HBP07237 508 aaKnown RBP7.4□□□□□ -1.22
SRP54-211ENST00000556445 BMP3P12645 472 aa7.4□□□□□ -1.22
SRP54-211ENST00000556445 NXPE4Q6UWF7 544 aa7.4□□□□□ -1.22
SRP54-211ENST00000556445 DTHD1Q6ZMT9 781 aa7.4□□□□□ -1.22
SRP54-211ENST00000556445 SND1Q7KZF4 910 aaKnown RBP eCLIP7.4□□□□□ -1.22
SRP54-211ENST00000556445 C12orf50Q8NA57 414 aaPredicted RBP7.4□□□□□ -1.22
SRP54-211ENST00000556445 CYP4F12Q9HCS2 524 aa7.4□□□□□ -1.22
SRP54-211ENST00000556445 HIF3AQ9Y2N7 669 aa7.4□□□□□ -1.22
SRP54-211ENST00000556445 FHAD1B1AJZ9 1412 aa7.4□□□□□ -1.22
SRP54-211ENST00000556445 ARAP1Q96P48 1450 aa7.4□□□□□ -1.22
SRP54-211ENST00000556445 EFCAB5A4FU69 1503 aa7.4□□□□□ -1.22
SRP54-211ENST00000556445 GRIN2BQ13224 1484 aa7.39□□□□□ -1.23
SRP54-211ENST00000556445 ARHGAP35Q9NRY4 1499 aa7.39□□□□□ -1.23
SRP54-211ENST00000556445 TDRD9Q8NDG6 1382 aaKnown RBP7.39□□□□□ -1.23
SRP54-211ENST00000556445 XRCC5P13010 732 aaKnown RBP7.39□□□□□ -1.23
SRP54-211ENST00000556445 DRD2P14416 443 aa7.39□□□□□ -1.23
SRP54-211ENST00000556445 SLC51AQ86UW1 340 aa7.39□□□□□ -1.23
SRP54-211ENST00000556445 TRIM42Q8IWZ5 723 aa7.39□□□□□ -1.23
SRP54-211ENST00000556445 FAM177A1Q8N128 213 aaPredicted RBP7.39□□□□□ -1.23
SRP54-211ENST00000556445 C2CD4AQ8NCU7 369 aaPredicted RBP7.39□□□□□ -1.23
SRP54-211ENST00000556445 C3orf58Q8NDZ4 430 aa7.39□□□□□ -1.23
SRP54-211ENST00000556445 DDX54Q8TDD1 881 aaKnown RBP7.39□□□□□ -1.23
SRP54-211ENST00000556445 PBRM1Q86U86 1689 aa7.38□□□□□ -1.23
SRP54-211ENST00000556445 MAP3K1Q13233 1512 aa7.38□□□□□ -1.23
SRP54-211ENST00000556445 HMX2A2RU54 273 aa7.38□□□□□ -1.23
SRP54-211ENST00000556445 IGLV1-40P01703 118 aa7.38□□□□□ -1.23
SRP54-211ENST00000556445 ZNF157P51786 506 aaPredicted RBP7.38□□□□□ -1.23
SRP54-211ENST00000556445 SOX4Q06945 474 aaPredicted RBP7.38□□□□□ -1.23
SRP54-211ENST00000556445 AP3B2Q13367 1082 aa7.38□□□□□ -1.23
SRP54-211ENST00000556445 SGO2Q562F6 1265 aa7.38□□□□□ -1.23
SRP54-211ENST00000556445 ALG1LQ6GMV1 187 aa7.38□□□□□ -1.23
SRP54-211ENST00000556445 CLEC10AQ8IUN9 316 aa7.38□□□□□ -1.23
SRP54-211ENST00000556445 FAM83CQ9BQN1 747 aa7.38□□□□□ -1.23
SRP54-211ENST00000556445 CORO1BQ9BR76 489 aa7.38□□□□□ -1.23
SRP54-211ENST00000556445 OSBPL7Q9BZF2 842 aa7.38□□□□□ -1.23
SRP54-211ENST00000556445 GAS2O43903 313 aaKnown RBP7.37□□□□□ -1.23
SRP54-211ENST00000556445 ADH5P11766 374 aa7.37□□□□□ -1.23
SRP54-211ENST00000556445 XP32Q5T750 250 aa7.37□□□□□ -1.23
SRP54-211ENST00000556445 BEND4Q6ZU67 534 aa7.37□□□□□ -1.23
SRP54-211ENST00000556445 ZFYVE1Q9HBF4 777 aa7.37□□□□□ -1.23
SRP54-211ENST00000556445 PPP4R2Q9NY27 417 aa7.37□□□□□ -1.23
SRP54-211ENST00000556445 RNF112Q9ULX5 631 aa7.37□□□□□ -1.23
SRP54-211ENST00000556445 GSC2O15499 205 aa7.36□□□□□ -1.23
SRP54-211ENST00000556445 MAP4P27816 1152 aaKnown RBP7.36□□□□□ -1.23
SRP54-211ENST00000556445 NFIAQ12857 509 aa7.36□□□□□ -1.23
SRP54-211ENST00000556445 HP1BP3Q5SSJ5 553 aaPredicted RBP7.36□□□□□ -1.23
SRP54-211ENST00000556445 RNF43Q68DV7 783 aa7.36□□□□□ -1.23
SRP54-211ENST00000556445 KCNF1Q9H3M0 494 aa7.36□□□□□ -1.23
SRP54-211ENST00000556445 THOC2Q8NI27 1593 aaKnown RBP7.36□□□□□ -1.23
SRP54-211ENST00000556445 ATP2B2Q01814 1243 aa7.35□□□□□ -1.23
SRP54-211ENST00000556445 ARTNQ5T4W7 220 aa7.35□□□□□ -1.23
SRP54-211ENST00000556445 CDPF1Q6NVV7 123 aa7.35□□□□□ -1.23
SRP54-211ENST00000556445 TMEM39AQ9NV64 488 aa7.35□□□□□ -1.23
SRP54-211ENST00000556445 GPN3Q9UHW5 284 aaPredicted RBP7.35□□□□□ -1.23
SRP54-211ENST00000556445 AKAP2Q9Y2D5 859 aa7.35□□□□□ -1.23
SRP54-211ENST00000556445 AQRO60306 1485 aaKnown RBP eCLIP7.35□□□□□ -1.23
SRP54-211ENST00000556445 FMN1Q68DA7 1419 aa7.35□□□□□ -1.23
SRP54-211ENST00000556445 ADAMTS12P58397 1594 aa7.34□□□□□ -1.23
SRP54-211ENST00000556445 SYNGAP1Q96PV0 1343 aa7.34□□□□□ -1.23
SRP54-211ENST00000556445 SCO2A0A1W2PP80 73 aa7.34□□□□□ -1.23
SRP54-211ENST00000556445 GIPC1O14908 333 aa7.34□□□□□ -1.23
SRP54-211ENST00000556445 AOC2O75106 756 aa7.34□□□□□ -1.23
SRP54-211ENST00000556445 LDHBP07195 334 aaKnown RBP7.34□□□□□ -1.23
SRP54-211ENST00000556445 GSTT1P30711 240 aa7.34□□□□□ -1.23
SRP54-211ENST00000556445 LRP8Q14114 963 aa7.34□□□□□ -1.23
SRP54-211ENST00000556445 PDZD3Q86UT5 571 aa7.34□□□□□ -1.23
SRP54-211ENST00000556445 ZDHHC13Q8IUH4 622 aa7.34□□□□□ -1.23
SRP54-211ENST00000556445 STK35Q8TDR2 534 aa7.34□□□□□ -1.23
SRP54-211ENST00000556445 DBNDD2Q9BQY9 259 aa7.34□□□□□ -1.23
SRP54-211ENST00000556445 WDR18Q9BV38 432 aa7.34□□□□□ -1.23
SRP54-211ENST00000556445 SRCIN1Q9C0H9 1055 aa7.34□□□□□ -1.23
SRP54-211ENST00000556445 GSX1Q9H4S2 264 aaPredicted RBP7.34□□□□□ -1.23
SRP54-211ENST00000556445 CCDC86Q9H6F5 360 aaKnown RBP7.34□□□□□ -1.23
SRP54-211ENST00000556445 ACTL7BQ9Y614 415 aa7.34□□□□□ -1.23
SRP54-211ENST00000556445 MAGI1Q96QZ7 1491 aaPredicted RBP7.33□□□□□ -1.24
SRP54-211ENST00000556445 ANKRD33BA6NCL7 494 aa7.33□□□□□ -1.24
SRP54-211ENST00000556445 ZNF862O60290 1169 aa7.33□□□□□ -1.24
SRP54-211ENST00000556445 GSTP1P09211 210 aaKnown RBP7.33□□□□□ -1.24
SRP54-211ENST00000556445 PPP2R3AQ06190 1150 aa7.33□□□□□ -1.24
SRP54-211ENST00000556445 PDE3AQ14432 1141 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms