RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 LYSMD3Q7Z3D4 306 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 LRP10Q7Z4F1 713 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 NPAS3Q8IXF0 933 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 TSPYL6Q8N831 410 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 ADAMTS19Q8TE59 1207 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 CNKSR1Q969H4 720 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 PPP1R12CQ9BZL4 782 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 ARHGEF10LQ9HCE6 1279 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 ZNF652Q9Y2D9 606 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 C4AP0C0L4 1744 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 PALM3A6NDB9 673 aaPredicted RBP7.6□□□□□ -1.19
DDB1-210ENST00000538129 GTF2IP78347 998 aa7.6□□□□□ -1.19
DDB1-210ENST00000538129 HNRNPUQ00839 825 aaKnown RBP eCLIP7.6□□□□□ -1.19
DDB1-210ENST00000538129 NFIXQ14938 502 aa7.6□□□□□ -1.19
DDB1-210ENST00000538129 PROSER3Q2NL68 480 aa7.6□□□□□ -1.19
DDB1-210ENST00000538129 TBC1D9Q6ZT07 1266 aa7.6□□□□□ -1.19
DDB1-210ENST00000538129 TTLL7Q6ZT98 887 aa7.6□□□□□ -1.19
DDB1-210ENST00000538129 COPS6Q7L5N1 327 aa7.6□□□□□ -1.19
DDB1-210ENST00000538129 SETDB2Q96T68 719 aa7.6□□□□□ -1.19
DDB1-210ENST00000538129 CHPF2Q9P2E5 772 aa7.6□□□□□ -1.19
DDB1-210ENST00000538129 CD2APQ9Y5K6 639 aa7.6□□□□□ -1.19
DDB1-210ENST00000538129 PARP3Q9Y6F1 533 aa7.6□□□□□ -1.19
DDB1-210ENST00000538129 MAP3K15Q6ZN16 1313 aa7.59□□□□□ -1.19
DDB1-210ENST00000538129 FIGNL2A6NMB9 653 aa7.59□□□□□ -1.19
DDB1-210ENST00000538129 POTECB2RU33 542 aa7.59□□□□□ -1.19
DDB1-210ENST00000538129 ANXA1P04083 346 aa7.59□□□□□ -1.19
DDB1-210ENST00000538129 CTSOP43234 321 aaPredicted RBP7.59□□□□□ -1.19
DDB1-210ENST00000538129 GNASQ5JWF2 1037 aa7.59□□□□□ -1.19
DDB1-210ENST00000538129 TBC1D9BQ66K14 1250 aa7.59□□□□□ -1.19
DDB1-210ENST00000538129 DEPDC4Q8N2C3 294 aa7.59□□□□□ -1.19
DDB1-210ENST00000538129 LARGE2Q8N3Y3 721 aa7.59□□□□□ -1.19
DDB1-210ENST00000538129 KCTD17Q8N5Z5 321 aa7.59□□□□□ -1.19
DDB1-210ENST00000538129 XAGE3Q8WTP9 111 aa7.59□□□□□ -1.19
DDB1-210ENST00000538129 ZNF428Q96B54 188 aa7.59□□□□□ -1.19
DDB1-210ENST00000538129 XAGE2Q96GT9 111 aa7.59□□□□□ -1.19
DDB1-210ENST00000538129 SYT17Q9BSW7 474 aa7.59□□□□□ -1.19
DDB1-210ENST00000538129 STK31Q9BXU1 1019 aa7.59□□□□□ -1.19
DDB1-210ENST00000538129 VRTNQ9H8Y1 702 aa7.59□□□□□ -1.19
DDB1-210ENST00000538129 MKRN1Q9UHC7 482 aaKnown RBP7.59□□□□□ -1.19
DDB1-210ENST00000538129 NUP98P52948 1817 aa7.59□□□□□ -1.19
DDB1-210ENST00000538129 POLRMTO00411 1230 aaKnown RBP7.58□□□□□ -1.2
DDB1-210ENST00000538129 SERPINB2P05120 415 aa7.58□□□□□ -1.2
DDB1-210ENST00000538129 CT47B1P0C2W7 299 aaPredicted RBP7.58□□□□□ -1.2
DDB1-210ENST00000538129 LMOD1P29536 600 aaPredicted RBP7.58□□□□□ -1.2
DDB1-210ENST00000538129 GDF10P55107 478 aa7.58□□□□□ -1.2
DDB1-210ENST00000538129 DDR1Q08345 913 aa7.58□□□□□ -1.2
DDB1-210ENST00000538129 AIMP1Q12904 312 aaKnown RBP7.58□□□□□ -1.2
DDB1-210ENST00000538129 HLFQ16534 295 aa7.58□□□□□ -1.2
DDB1-210ENST00000538129 HSP90AB3PQ58FF7 597 aa7.58□□□□□ -1.2
DDB1-210ENST00000538129 WDR44Q5JSH3 913 aa7.58□□□□□ -1.2
DDB1-210ENST00000538129 TMEM214Q6NUQ4 689 aaKnown RBP7.58□□□□□ -1.2
DDB1-210ENST00000538129 TPTE2Q6XPS3 522 aa7.58□□□□□ -1.2
DDB1-210ENST00000538129 PLBD2Q8NHP8 589 aa7.58□□□□□ -1.2
DDB1-210ENST00000538129 UCN2Q96RP3 112 aa7.58□□□□□ -1.2
DDB1-210ENST00000538129 ZSCAN10Q96SZ4 725 aaPredicted RBP7.58□□□□□ -1.2
DDB1-210ENST00000538129 FHDC1Q9C0D6 1143 aaPredicted RBP7.58□□□□□ -1.2
DDB1-210ENST00000538129 DNAAF2Q9NVR5 837 aaKnown RBP7.58□□□□□ -1.2
DDB1-210ENST00000538129 NXF1Q9UBU9 619 aaKnown RBP7.58□□□□□ -1.2
DDB1-210ENST00000538129 MAFBQ9Y5Q3 323 aaPredicted RBP7.58□□□□□ -1.2
DDB1-210ENST00000538129 ZBED9Q6R2W3 1325 aa7.57□□□□□ -1.2
DDB1-210ENST00000538129 DDX58O95786 925 aaKnown RBP7.57□□□□□ -1.2
DDB1-210ENST00000538129 INHAP05111 366 aa7.57□□□□□ -1.2
DDB1-210ENST00000538129 TGFB2P61812 414 aa7.57□□□□□ -1.2
DDB1-210ENST00000538129 TCIRG1Q13488 830 aa7.57□□□□□ -1.2
DDB1-210ENST00000538129 BICDL1Q6ZP65 573 aa7.57□□□□□ -1.2
DDB1-210ENST00000538129 ZNF34Q8IZ26 560 aa7.57□□□□□ -1.2
DDB1-210ENST00000538129 KDF1Q8NAX2 398 aaPredicted RBP7.57□□□□□ -1.2
DDB1-210ENST00000538129 RNF217Q8TC41 542 aa7.57□□□□□ -1.2
DDB1-210ENST00000538129 PHAXQ9H814 394 aaKnown RBP7.57□□□□□ -1.2
DDB1-210ENST00000538129 NIP7Q9Y221 180 aaKnown RBP eCLIP7.57□□□□□ -1.2
DDB1-210ENST00000538129 CARMIL3Q8ND23 1372 aa7.57□□□□□ -1.2
DDB1-210ENST00000538129 RASA1P20936 1047 aa7.56□□□□□ -1.2
DDB1-210ENST00000538129 CENPCQ03188 943 aa7.56□□□□□ -1.2
DDB1-210ENST00000538129 TRIM28Q13263 835 aaKnown RBP7.56□□□□□ -1.2
DDB1-210ENST00000538129 TLR1Q15399 786 aa7.56□□□□□ -1.2
DDB1-210ENST00000538129 PARP10Q53GL7 1025 aa7.56□□□□□ -1.2
DDB1-210ENST00000538129 KSR2Q6VAB6 950 aa7.56□□□□□ -1.2
DDB1-210ENST00000538129 PRICKLE2Q7Z3G6 844 aa7.56□□□□□ -1.2
DDB1-210ENST00000538129 BRIP1Q9BX63 1249 aa7.56□□□□□ -1.2
DDB1-210ENST00000538129 NYXQ9GZU5 481 aa7.56□□□□□ -1.2
DDB1-210ENST00000538129 RAB6BQ9NRW1 208 aa7.56□□□□□ -1.2
DDB1-210ENST00000538129 DNMT3LQ9UJW3 386 aa7.56□□□□□ -1.2
DDB1-210ENST00000538129 CHMP3Q9Y3E7 222 aa7.56□□□□□ -1.2
DDB1-210ENST00000538129 AFDNP55196 1824 aaKnown RBP7.56□□□□□ -1.2
DDB1-210ENST00000538129 BCORQ6W2J9 1755 aa7.56□□□□□ -1.2
DDB1-210ENST00000538129 ATP10DQ9P241 1426 aa7.55□□□□□ -1.2
DDB1-210ENST00000538129 SCN7AQ01118 1682 aa7.55□□□□□ -1.2
DDB1-210ENST00000538129 TCERG1O14776 1098 aaKnown RBP7.55□□□□□ -1.2
DDB1-210ENST00000538129 ALDH1L2Q3SY69 923 aa7.55□□□□□ -1.2
DDB1-210ENST00000538129 PRR5LQ6MZQ0 368 aa7.55□□□□□ -1.2
DDB1-210ENST00000538129 G2E3Q7L622 706 aa7.55□□□□□ -1.2
DDB1-210ENST00000538129 TAS1R3Q7RTX0 852 aa7.55□□□□□ -1.2
DDB1-210ENST00000538129 PPP1R42Q7Z4L9 355 aa7.55□□□□□ -1.2
DDB1-210ENST00000538129 NBPF5PQ86XG9 351 aaPredicted RBP7.55□□□□□ -1.2
DDB1-210ENST00000538129 OGFOD1Q8N543 542 aa7.55□□□□□ -1.2
DDB1-210ENST00000538129 ISCA1Q9BUE6 129 aa7.55□□□□□ -1.2
DDB1-210ENST00000538129 GRIP2Q9C0E4 1043 aa7.55□□□□□ -1.2
DDB1-210ENST00000538129 PCDHGA11Q9Y5H2 935 aa7.55□□□□□ -1.2
DDB1-210ENST00000538129 KIF13BQ9NQT8 1826 aa7.55□□□□□ -1.2
DDB1-210ENST00000538129 PI4KAP2A4QPH2 592 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms