RNA–Protein interactions for RNA: ENST00000536996.5

SPPL3-204, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-204ENST00000536996 SULF1Q8IWU6 871 aa17.51■□□□□ 0.39
SPPL3-204ENST00000536996 EDC3Q96F86 508 aaKnown RBP17.51■□□□□ 0.39
SPPL3-204ENST00000536996 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.51■□□□□ 0.39
SPPL3-204ENST00000536996 PDE4AP27815 886 aa17.5■□□□□ 0.39
SPPL3-204ENST00000536996 FKBP1CQ5VVH2 108 aa17.5■□□□□ 0.39
SPPL3-204ENST00000536996 KRT26Q7Z3Y9 468 aa17.5■□□□□ 0.39
SPPL3-204ENST00000536996 KBTBD3Q8NAB2 608 aa17.5■□□□□ 0.39
SPPL3-204ENST00000536996 TDRD3Q9H7E2 651 aaKnown RBP17.5■□□□□ 0.39
SPPL3-204ENST00000536996 ZNF70Q9UC06 446 aaPredicted RBP17.5■□□□□ 0.39
SPPL3-204ENST00000536996 DDX60LQ5H9U9 1706 aaKnown RBP17.5■□□□□ 0.39
SPPL3-204ENST00000536996 TNFAIP1Q13829 316 aa17.49■□□□□ 0.39
SPPL3-204ENST00000536996 ZSCAN25Q6NSZ9 544 aa17.49■□□□□ 0.39
SPPL3-204ENST00000536996 TICAM2Q86XR7 235 aa17.49■□□□□ 0.39
SPPL3-204ENST00000536996 CERS3Q8IU89 383 aa17.49■□□□□ 0.39
SPPL3-204ENST00000536996 MAGEB6Q8N7X4 407 aa17.49■□□□□ 0.39
SPPL3-204ENST00000536996 TMOD2Q9NZR1 351 aa17.49■□□□□ 0.39
SPPL3-204ENST00000536996 PPP2R3BQ9Y5P8 575 aa17.49■□□□□ 0.39
SPPL3-204ENST00000536996 PASKQ96RG2 1323 aa17.48■□□□□ 0.39
SPPL3-204ENST00000536996 LAMB1P07942 1786 aa17.48■□□□□ 0.39
SPPL3-204ENST00000536996 OTOFQ9HC10 1997 aa17.48■□□□□ 0.39
SPPL3-204ENST00000536996 CLRN2A0PK11 232 aa17.48■□□□□ 0.39
SPPL3-204ENST00000536996 BAG3O95817 575 aa17.48■□□□□ 0.39
SPPL3-204ENST00000536996 PDE6AP16499 860 aa17.48■□□□□ 0.39
SPPL3-204ENST00000536996 CYP7A1P22680 504 aa17.48■□□□□ 0.39
SPPL3-204ENST00000536996 BTDP43251 543 aa17.48■□□□□ 0.39
SPPL3-204ENST00000536996 PPP4CP60510 307 aa17.48■□□□□ 0.39
SPPL3-204ENST00000536996 LRRFIP1Q32MZ4 808 aaKnown RBP17.48■□□□□ 0.39
SPPL3-204ENST00000536996 SLC9C2Q5TAH2 1124 aa17.48■□□□□ 0.39
SPPL3-204ENST00000536996 CDC42EP5Q6NZY7 148 aa17.48■□□□□ 0.39
SPPL3-204ENST00000536996 NOL10Q9BSC4 688 aaKnown RBP17.48■□□□□ 0.39
SPPL3-204ENST00000536996 GLIS2Q9BZE0 524 aaPredicted RBP17.48■□□□□ 0.39
SPPL3-204ENST00000536996 RFX7Q2KHR2 1363 aa17.48■□□□□ 0.39
SPPL3-204ENST00000536996 PAPPA2Q9BXP8 1791 aa17.48■□□□□ 0.39
SPPL3-204ENST00000536996 SIPA1L1O43166 1804 aa17.47■□□□□ 0.39
SPPL3-204ENST00000536996 TCRBV5S4A2TA0A5A2 114 aa17.47■□□□□ 0.39
SPPL3-204ENST00000536996 PLCG2P16885 1265 aa17.47■□□□□ 0.39
SPPL3-204ENST00000536996 ADD2P35612 726 aa17.47■□□□□ 0.39
SPPL3-204ENST00000536996 C1QTNF8P60827 252 aa17.47■□□□□ 0.39
SPPL3-204ENST00000536996 ADGRA1Q86SQ6 560 aa17.47■□□□□ 0.39
SPPL3-204ENST00000536996 FAM83AQ86UY5 434 aa17.47■□□□□ 0.39
SPPL3-204ENST00000536996 EVI5LQ96CN4 794 aa17.47■□□□□ 0.39
SPPL3-204ENST00000536996 RPAP1Q9BWH6 1393 aaPredicted RBP17.46■□□□□ 0.39
SPPL3-204ENST00000536996 ADM5C9JUS6 153 aa17.46■□□□□ 0.39
SPPL3-204ENST00000536996 ZFYP08048 801 aaPredicted RBP17.46■□□□□ 0.39
SPPL3-204ENST00000536996 TNNI2P48788 182 aa17.46■□□□□ 0.39
SPPL3-204ENST00000536996 RHBDL3P58872 404 aa17.46■□□□□ 0.39
SPPL3-204ENST00000536996 UBE3CQ15386 1083 aa17.46■□□□□ 0.39
SPPL3-204ENST00000536996 USP48Q86UV5 1035 aa17.46■□□□□ 0.39
SPPL3-204ENST00000536996 IDI2Q9BXS1 227 aa17.46■□□□□ 0.39
SPPL3-204ENST00000536996 VEZTQ9HBM0 779 aa17.46■□□□□ 0.39
SPPL3-204ENST00000536996 USP40Q9NVE5 1235 aa17.46■□□□□ 0.39
SPPL3-204ENST00000536996 ATAD5Q96QE3 1844 aa17.46■□□□□ 0.39
SPPL3-204ENST00000536996 ZNF532Q9HCE3 1301 aa17.46■□□□□ 0.38
SPPL3-204ENST00000536996 COL2A1P02458 1487 aaPredicted RBP17.45■□□□□ 0.38
SPPL3-204ENST00000536996 NPM3O75607 178 aaKnown RBP17.45■□□□□ 0.38
SPPL3-204ENST00000536996 DEFB129Q9H1M3 183 aa17.45■□□□□ 0.38
SPPL3-204ENST00000536996 CNTNAP1P78357 1384 aa17.44■□□□□ 0.38
SPPL3-204ENST00000536996 TRAF5O00463 557 aa17.44■□□□□ 0.38
SPPL3-204ENST00000536996 FSD1Q9BTV5 496 aa17.44■□□□□ 0.38
SPPL3-204ENST00000536996 AATFQ9NY61 560 aaKnown RBP eCLIP17.44■□□□□ 0.38
SPPL3-204ENST00000536996 TCP10L2B9ZVM9 353 aa17.43■□□□□ 0.38
SPPL3-204ENST00000536996 RNF113AO15541 343 aaKnown RBP17.43■□□□□ 0.38
SPPL3-204ENST00000536996 ENTPD3O75355 529 aa17.43■□□□□ 0.38
SPPL3-204ENST00000536996 WDHD1O75717 1129 aaPredicted RBP17.43■□□□□ 0.38
SPPL3-204ENST00000536996 CACNB3P54284 484 aa17.43■□□□□ 0.38
SPPL3-204ENST00000536996 RASA3Q14644 834 aa17.43■□□□□ 0.38
SPPL3-204ENST00000536996 TTC22Q5TAA0 569 aa17.43■□□□□ 0.38
SPPL3-204ENST00000536996 FAM151AQ8WW52 585 aa17.43■□□□□ 0.38
SPPL3-204ENST00000536996 CDCA5Q96FF9 252 aa17.43■□□□□ 0.38
SPPL3-204ENST00000536996 RIOK1Q9BRS2 568 aaKnown RBP17.43■□□□□ 0.38
SPPL3-204ENST00000536996 MAGEB6P1A0A0J9YX57 407 aa17.42■□□□□ 0.38
SPPL3-204ENST00000536996 TEX11Q8IYF3 940 aa17.42■□□□□ 0.38
SPPL3-204ENST00000536996 SH3RF3Q8TEJ3 882 aaPredicted RBP17.42■□□□□ 0.38
SPPL3-204ENST00000536996 APPBP2Q92624 585 aa17.42■□□□□ 0.38
SPPL3-204ENST00000536996 SCAF8Q9UPN6 1271 aaKnown RBP17.42■□□□□ 0.38
SPPL3-204ENST00000536996 SSC5DA1L4H1 1573 aa17.41■□□□□ 0.38
SPPL3-204ENST00000536996 TRIM6-TRIM34B2RNG4 842 aa17.41■□□□□ 0.38
SPPL3-204ENST00000536996 NF2P35240 595 aa17.41■□□□□ 0.38
SPPL3-204ENST00000536996 APLP1P51693 650 aa17.41■□□□□ 0.38
SPPL3-204ENST00000536996 DYNLL1P63167 89 aaKnown RBP17.41■□□□□ 0.38
SPPL3-204ENST00000536996 NFIAQ12857 509 aa17.41■□□□□ 0.38
SPPL3-204ENST00000536996 MIGA1Q8NAN2 632 aa17.41■□□□□ 0.38
SPPL3-204ENST00000536996 TEPSINQ96N21 525 aa17.41■□□□□ 0.38
SPPL3-204ENST00000536996 FAM198AQ9UFP1 575 aa17.41■□□□□ 0.38
SPPL3-204ENST00000536996 DOCK1Q14185 1865 aa17.41■□□□□ 0.38
SPPL3-204ENST00000536996 ATRNL1Q5VV63 1379 aa17.4■□□□□ 0.38
SPPL3-204ENST00000536996 RGS3P49796 1198 aa17.4■□□□□ 0.38
SPPL3-204ENST00000536996 FMR1Q06787 632 aaKnown RBP eCLIP17.4■□□□□ 0.38
SPPL3-204ENST00000536996 SUPT20HL1Q3ZLR7 823 aa17.4■□□□□ 0.38
SPPL3-204ENST00000536996 RILPL2Q969X0 211 aa17.4■□□□□ 0.38
SPPL3-204ENST00000536996 TMEM39BQ9GZU3 492 aa17.4■□□□□ 0.38
SPPL3-204ENST00000536996 LAMA4Q16363 1823 aa17.4■□□□□ 0.38
SPPL3-204ENST00000536996 TMEM88BA6NKF7 163 aa17.39■□□□□ 0.37
SPPL3-204ENST00000536996 CELF2O95319 508 aaKnown RBP17.39■□□□□ 0.37
SPPL3-204ENST00000536996 CHGBP05060 677 aa17.39■□□□□ 0.37
SPPL3-204ENST00000536996 GSPT1P15170 499 aaKnown RBP17.39■□□□□ 0.37
SPPL3-204ENST00000536996 HSPA6P17066 643 aa17.39■□□□□ 0.37
SPPL3-204ENST00000536996 FKBP1BP68106 108 aa17.39■□□□□ 0.37
SPPL3-204ENST00000536996 ZMYM1Q5SVZ6 1142 aa17.39■□□□□ 0.37
SPPL3-204ENST00000536996 CST9Q5W186 159 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms