RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 EIF4A1P60842 406 aaKnown RBP6.41□□□□□ -1.38
CDH9-203ENST00000505045 TAF7Q15545 349 aaPredicted RBP6.41□□□□□ -1.38
CDH9-203ENST00000505045 HLFQ16534 295 aa6.41□□□□□ -1.38
CDH9-203ENST00000505045 KRT24Q2M2I5 525 aa6.41□□□□□ -1.38
CDH9-203ENST00000505045 CC2D2BQ6DHV5 1058 aa6.41□□□□□ -1.38
CDH9-203ENST00000505045 ARHGAP27Q6ZUM4 889 aa6.41□□□□□ -1.38
CDH9-203ENST00000505045 SLC51AQ86UW1 340 aa6.41□□□□□ -1.38
CDH9-203ENST00000505045 ZNF592Q92610 1267 aa6.41□□□□□ -1.38
CDH9-203ENST00000505045 PRKRIP1Q9H875 184 aaPredicted RBP6.41□□□□□ -1.38
CDH9-203ENST00000505045 PIM2Q9P1W9 311 aa6.41□□□□□ -1.38
CDH9-203ENST00000505045 SENP3-EIF4A1A0A087X0R7 540 aa6.4□□□□□ -1.38
CDH9-203ENST00000505045 ARHGEF15O94989 841 aa6.4□□□□□ -1.38
CDH9-203ENST00000505045 TMPOP42166 694 aaKnown RBP6.4□□□□□ -1.38
CDH9-203ENST00000505045 RNF144AP50876 292 aaPredicted RBP6.4□□□□□ -1.38
CDH9-203ENST00000505045 CCDC184Q52MB2 194 aa6.4□□□□□ -1.38
CDH9-203ENST00000505045 DALRD3Q5D0E6 543 aaKnown RBP6.4□□□□□ -1.38
CDH9-203ENST00000505045 PHTF2Q8N3S3 785 aa6.4□□□□□ -1.38
CDH9-203ENST00000505045 CCDC155Q8N6L0 562 aa6.4□□□□□ -1.38
CDH9-203ENST00000505045 GPR161Q8N6U8 529 aaKnown RBP6.4□□□□□ -1.38
CDH9-203ENST00000505045 TEX13AQ9BXU3 409 aaPredicted RBP6.4□□□□□ -1.38
CDH9-203ENST00000505045 CEP126Q9P2H0 1117 aa6.4□□□□□ -1.38
CDH9-203ENST00000505045 TAF1P21675 1872 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 UBN2Q6ZU65 1347 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 A0A087WZG4 1122 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 NFKBIEO00221 500 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 ANXA1P04083 346 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 SCTRP47872 440 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 RIPK4P57078 832 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 PROSER3Q2NL68 480 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 C9orf131Q5VYM1 1079 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 TTLL7Q6ZT98 887 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 LRP10Q7Z4F1 713 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 C2CD5Q86YS7 1000 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 CNBD1Q8NA66 436 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 KRTAP4-2Q9BYR5 136 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 POLMQ9NP87 494 aaPredicted RBP6.39□□□□□ -1.39
CDH9-203ENST00000505045 NMRK2Q9NPI5 230 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 COL4A1P02462 1669 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 FAM177BA6PVY3 158 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 ATP5J2-PTCD1G3V325 749 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 MYL6BP14649 208 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 NGEFQ8N5V2 710 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 CCDC85AQ96PX6 553 aaPredicted RBP6.39□□□□□ -1.39
CDH9-203ENST00000505045 OSBPL3Q9H4L5 887 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 TSPYL4Q9UJ04 414 aa6.39□□□□□ -1.39
CDH9-203ENST00000505045 DDX60Q8IY21 1712 aaKnown RBP6.38□□□□□ -1.39
CDH9-203ENST00000505045 SNED1Q8TER0 1413 aa6.38□□□□□ -1.39
CDH9-203ENST00000505045 COL4A5P29400 1685 aa6.38□□□□□ -1.39
CDH9-203ENST00000505045 NEFMP07197 916 aa6.38□□□□□ -1.39
CDH9-203ENST00000505045 GPC1P35052 558 aa6.38□□□□□ -1.39
CDH9-203ENST00000505045 MCM6Q14566 821 aa6.38□□□□□ -1.39
CDH9-203ENST00000505045 OLFM4Q6UX06 510 aa6.38□□□□□ -1.39
CDH9-203ENST00000505045 SETDB2Q96T68 719 aa6.38□□□□□ -1.39
CDH9-203ENST00000505045 KRTAP4-9Q9BYQ8 210 aa6.38□□□□□ -1.39
CDH9-203ENST00000505045 RNF181Q9P0P0 153 aa6.38□□□□□ -1.39
CDH9-203ENST00000505045 NIP7Q9Y221 180 aaKnown RBP eCLIP6.38□□□□□ -1.39
CDH9-203ENST00000505045 WDR90Q96KV7 1748 aa6.37□□□□□ -1.39
CDH9-203ENST00000505045 SRGNP10124 158 aa6.37□□□□□ -1.39
CDH9-203ENST00000505045 GPTP24298 496 aa6.37□□□□□ -1.39
CDH9-203ENST00000505045 NBPF5PQ86XG9 351 aaPredicted RBP6.37□□□□□ -1.39
CDH9-203ENST00000505045 TTLL6Q8N841 843 aa6.37□□□□□ -1.39
CDH9-203ENST00000505045 BRIP1Q9BX63 1249 aa6.37□□□□□ -1.39
CDH9-203ENST00000505045 PCDHB11Q9Y5F2 797 aa6.37□□□□□ -1.39
CDH9-203ENST00000505045 MAP3K15Q6ZN16 1313 aa6.37□□□□□ -1.39
CDH9-203ENST00000505045 A0A1W2PRU2 124 aa6.36□□□□□ -1.39
CDH9-203ENST00000505045 H0YIN7 160 aa6.36□□□□□ -1.39
CDH9-203ENST00000505045 C21orf2O43822 256 aa6.36□□□□□ -1.39
CDH9-203ENST00000505045 ITGA6P23229 1130 aa6.36□□□□□ -1.39
CDH9-203ENST00000505045 PRPF40BQ6NWY9 871 aaKnown RBP6.36□□□□□ -1.39
CDH9-203ENST00000505045 CLEC4GQ6UXB4 293 aa6.36□□□□□ -1.39
CDH9-203ENST00000505045 LYSMD3Q7Z3D4 306 aa6.36□□□□□ -1.39
CDH9-203ENST00000505045 PNISRQ8TF01 805 aaKnown RBP6.36□□□□□ -1.39
CDH9-203ENST00000505045 WHAMMQ8TF30 809 aa6.36□□□□□ -1.39
CDH9-203ENST00000505045 ZNF622Q969S3 477 aaKnown RBP eCLIP6.36□□□□□ -1.39
CDH9-203ENST00000505045 ZNF428Q96B54 188 aa6.36□□□□□ -1.39
CDH9-203ENST00000505045 EIF2S2P20042 333 aaKnown RBP6.36□□□□□ -1.39
CDH9-203ENST00000505045 ST5P78524 1137 aa6.36□□□□□ -1.39
CDH9-203ENST00000505045 WDR43Q15061 677 aaKnown RBP eCLIP6.36□□□□□ -1.39
CDH9-203ENST00000505045 NPM2Q86SE8 214 aaKnown RBP6.36□□□□□ -1.39
CDH9-203ENST00000505045 RUNDC1Q96C34 613 aa6.36□□□□□ -1.39
CDH9-203ENST00000505045 GRIP2Q9C0E4 1043 aa6.36□□□□□ -1.39
CDH9-203ENST00000505045 ZNF652Q9Y2D9 606 aa6.36□□□□□ -1.39
CDH9-203ENST00000505045 CHL1O00533 1208 aa6.35□□□□□ -1.39
CDH9-203ENST00000505045 NPHP1O15259 732 aa6.35□□□□□ -1.39
CDH9-203ENST00000505045 PDE6BP35913 854 aa6.35□□□□□ -1.39
CDH9-203ENST00000505045 TSGA10IPQ3SY00 556 aa6.35□□□□□ -1.39
CDH9-203ENST00000505045 CYP2U1Q7Z449 544 aa6.35□□□□□ -1.39
CDH9-203ENST00000505045 GDPD2Q9HCC8 539 aa6.35□□□□□ -1.39
CDH9-203ENST00000505045 PRM3Q9NNZ6 103 aa6.35□□□□□ -1.39
CDH9-203ENST00000505045 LAS1LQ9Y4W2 734 aaKnown RBP6.35□□□□□ -1.39
CDH9-203ENST00000505045 LRRC37AA6NMS7 1700 aa6.35□□□□□ -1.39
CDH9-203ENST00000505045 DUOX1Q9NRD9 1551 aa6.35□□□□□ -1.39
CDH9-203ENST00000505045 RIC1Q4ADV7 1423 aa6.34□□□□□ -1.39
CDH9-203ENST00000505045 KLRG2A4D1S0 409 aaPredicted RBP6.34□□□□□ -1.39
CDH9-203ENST00000505045 APAF1O14727 1248 aa6.34□□□□□ -1.39
CDH9-203ENST00000505045 NTSR2O95665 410 aa6.34□□□□□ -1.39
CDH9-203ENST00000505045 LMNB1P20700 586 aa6.34□□□□□ -1.39
CDH9-203ENST00000505045 LMOD3Q0VAK6 560 aa6.34□□□□□ -1.39
CDH9-203ENST00000505045 CLN3Q13286 438 aa6.34□□□□□ -1.39
CDH9-203ENST00000505045 SUSD4Q5VX71 490 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms