RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 TBC1D8O95759 1140 aa5.65□□□□□ -1.5
RTN1-207ENST00000490111 PDGFRBP09619 1106 aa5.65□□□□□ -1.5
RTN1-207ENST00000490111 FBXO45P0C2W1 286 aa5.65□□□□□ -1.5
RTN1-207ENST00000490111 BIRC2Q13490 618 aa5.65□□□□□ -1.5
RTN1-207ENST00000490111 SERINC3Q13530 473 aa5.65□□□□□ -1.5
RTN1-207ENST00000490111 PLEKHG4Q58EX7 1191 aa5.65□□□□□ -1.5
RTN1-207ENST00000490111 MAMSTRQ6ZN01 415 aa5.65□□□□□ -1.5
RTN1-207ENST00000490111 ANKRD13DQ6ZTN6 518 aa5.65□□□□□ -1.5
RTN1-207ENST00000490111 C11orf96Q7Z7L8 435 aa5.65□□□□□ -1.5
RTN1-207ENST00000490111 C2orf69Q8N8R5 385 aa5.65□□□□□ -1.5
RTN1-207ENST00000490111 PNISRQ8TF01 805 aaKnown RBP5.65□□□□□ -1.5
RTN1-207ENST00000490111 PKNOX2Q96KN3 472 aa5.65□□□□□ -1.5
RTN1-207ENST00000490111 GNL3LQ9NVN8 582 aaKnown RBP5.65□□□□□ -1.5
RTN1-207ENST00000490111 GEMIN8Q9NWZ8 242 aaKnown RBP5.65□□□□□ -1.5
RTN1-207ENST00000490111 VTI1BQ9UEU0 232 aa5.65□□□□□ -1.5
RTN1-207ENST00000490111 SEPT3Q9UH03 358 aa5.65□□□□□ -1.5
RTN1-207ENST00000490111 TRPC6Q9Y210 931 aa5.65□□□□□ -1.5
RTN1-207ENST00000490111 PRKAB1Q9Y478 270 aa5.65□□□□□ -1.5
RTN1-207ENST00000490111 K7ELQ4 463 aaPredicted RBP5.64□□□□□ -1.51
RTN1-207ENST00000490111 FYB1O15117 783 aa5.64□□□□□ -1.51
RTN1-207ENST00000490111 LDHBP07195 334 aaKnown RBP5.64□□□□□ -1.51
RTN1-207ENST00000490111 SLC10A3P09131 477 aa5.64□□□□□ -1.51
RTN1-207ENST00000490111 PLA2G5P39877 138 aa5.64□□□□□ -1.51
RTN1-207ENST00000490111 CABP4P57796 275 aa5.64□□□□□ -1.51
RTN1-207ENST00000490111 USP46P62068 366 aa5.64□□□□□ -1.51
RTN1-207ENST00000490111 CLDN10P78369 228 aa5.64□□□□□ -1.51
RTN1-207ENST00000490111 MTMR2Q13614 643 aa5.64□□□□□ -1.51
RTN1-207ENST00000490111 MTMR3Q13615 1198 aa5.64□□□□□ -1.51
RTN1-207ENST00000490111 TBC1D9BQ66K14 1250 aa5.64□□□□□ -1.51
RTN1-207ENST00000490111 OLFM4Q6UX06 510 aa5.64□□□□□ -1.51
RTN1-207ENST00000490111 USP48Q86UV5 1035 aa5.64□□□□□ -1.51
RTN1-207ENST00000490111 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.64□□□□□ -1.51
RTN1-207ENST00000490111 OGFOD1Q8N543 542 aa5.64□□□□□ -1.51
RTN1-207ENST00000490111 PTCD2Q8WV60 388 aaKnown RBP5.64□□□□□ -1.51
RTN1-207ENST00000490111 RNPC3Q96LT9 517 aaKnown RBP5.64□□□□□ -1.51
RTN1-207ENST00000490111 PRIMPOLQ96LW4 560 aa5.64□□□□□ -1.51
RTN1-207ENST00000490111 GBA2Q9HCG7 927 aaPredicted RBP5.64□□□□□ -1.51
RTN1-207ENST00000490111 GPRC5DQ9NZD1 345 aa5.64□□□□□ -1.51
RTN1-207ENST00000490111 DDX41Q9UJV9 622 aaKnown RBP5.64□□□□□ -1.51
RTN1-207ENST00000490111 STXBP5LQ9Y2K9 1186 aa5.64□□□□□ -1.51
RTN1-207ENST00000490111 EMILIN1Q9Y6C2 1016 aa5.64□□□□□ -1.51
RTN1-207ENST00000490111 COL15A1P39059 1388 aa5.64□□□□□ -1.51
RTN1-207ENST00000490111 SOX1O00570 391 aaPredicted RBP5.63□□□□□ -1.51
RTN1-207ENST00000490111 NPHP1O15259 732 aa5.63□□□□□ -1.51
RTN1-207ENST00000490111 FKTNO75072 461 aa5.63□□□□□ -1.51
RTN1-207ENST00000490111 HSP90AB1P08238 724 aaKnown RBP5.63□□□□□ -1.51
RTN1-207ENST00000490111 DSC3Q14574 896 aa5.63□□□□□ -1.51
RTN1-207ENST00000490111 DNAJC10Q8IXB1 793 aa5.63□□□□□ -1.51
RTN1-207ENST00000490111 FAM9BQ8IZU0 186 aa5.63□□□□□ -1.51
RTN1-207ENST00000490111 FAM122AQ96E09 287 aa5.63□□□□□ -1.51
RTN1-207ENST00000490111 LRCH3Q96II8 777 aa5.63□□□□□ -1.51
RTN1-207ENST00000490111 ZNF594Q96JF6 807 aaPredicted RBP5.63□□□□□ -1.51
RTN1-207ENST00000490111 C8orf48Q96LL4 319 aa5.63□□□□□ -1.51
RTN1-207ENST00000490111 CARD14Q9BXL6 1004 aa5.63□□□□□ -1.51
RTN1-207ENST00000490111 PRO3102Q9H379 93 aa5.63□□□□□ -1.51
RTN1-207ENST00000490111 BSDC1Q9NW68 430 aaPredicted RBP5.63□□□□□ -1.51
RTN1-207ENST00000490111 TTF2Q9UNY4 1162 aaKnown RBP5.63□□□□□ -1.51
RTN1-207ENST00000490111 ERBB4Q15303 1308 aa5.63□□□□□ -1.51
RTN1-207ENST00000490111 TONSLQ96HA7 1378 aa5.63□□□□□ -1.51
RTN1-207ENST00000490111 NCAPD2Q15021 1401 aa5.63□□□□□ -1.51
RTN1-207ENST00000490111 COL4A5P29400 1685 aa5.63□□□□□ -1.51
RTN1-207ENST00000490111 SZT2Q5T011 3432 aa5.62□□□□□ -1.51
RTN1-207ENST00000490111 ZBBXA8MT70 800 aa5.62□□□□□ -1.51
RTN1-207ENST00000490111 VIL1P09327 827 aaKnown RBP5.62□□□□□ -1.51
RTN1-207ENST00000490111 CYP19A1P11511 503 aaPredicted RBP5.62□□□□□ -1.51
RTN1-207ENST00000490111 NPR1P16066 1061 aa5.62□□□□□ -1.51
RTN1-207ENST00000490111 TNNT2P45379 298 aaPredicted RBP5.62□□□□□ -1.51
RTN1-207ENST00000490111 HIRAP54198 1017 aaPredicted RBP5.62□□□□□ -1.51
RTN1-207ENST00000490111 RACK1P63244 317 aaKnown RBP5.62□□□□□ -1.51
RTN1-207ENST00000490111 ST5P78524 1137 aa5.62□□□□□ -1.51
RTN1-207ENST00000490111 GUCA2AQ02747 115 aa5.62□□□□□ -1.51
RTN1-207ENST00000490111 PSMD2Q13200 908 aa5.62□□□□□ -1.51
RTN1-207ENST00000490111 ODR4Q5SWX8 454 aa5.62□□□□□ -1.51
RTN1-207ENST00000490111 DLK2Q6UY11 383 aa5.62□□□□□ -1.51
RTN1-207ENST00000490111 KRBA2Q6ZNG9 492 aa5.62□□□□□ -1.51
RTN1-207ENST00000490111 ZNF654Q8IZM8 581 aa5.62□□□□□ -1.51
RTN1-207ENST00000490111 PDCD7Q8N8D1 485 aaKnown RBP5.62□□□□□ -1.51
RTN1-207ENST00000490111 CNBD1Q8NA66 436 aa5.62□□□□□ -1.51
RTN1-207ENST00000490111 MKL1Q969V6 931 aa5.62□□□□□ -1.51
RTN1-207ENST00000490111 FRMD6Q96NE9 622 aa5.62□□□□□ -1.51
RTN1-207ENST00000490111 EYA1Q99502 592 aa5.62□□□□□ -1.51
RTN1-207ENST00000490111 SENP7Q9BQF6 1050 aa5.62□□□□□ -1.51
RTN1-207ENST00000490111 MTA3Q9BTC8 594 aa5.62□□□□□ -1.51
RTN1-207ENST00000490111 FLT4P35916 1363 aa5.62□□□□□ -1.51
RTN1-207ENST00000490111 A0A087WZG4 1122 aa5.61□□□□□ -1.51
RTN1-207ENST00000490111 A0A1W2PPC1 479 aa5.61□□□□□ -1.51
RTN1-207ENST00000490111 PPP1R12AO14974 1030 aaPredicted RBP5.61□□□□□ -1.51
RTN1-207ENST00000490111 NPR3P17342 541 aa5.61□□□□□ -1.51
RTN1-207ENST00000490111 ZEB1P37275 1124 aaPredicted RBP5.61□□□□□ -1.51
RTN1-207ENST00000490111 PPP4CP60510 307 aa5.61□□□□□ -1.51
RTN1-207ENST00000490111 KCNH2Q12809 1159 aa5.61□□□□□ -1.51
RTN1-207ENST00000490111 UBE4AQ14139 1066 aa5.61□□□□□ -1.51
RTN1-207ENST00000490111 ZNF394Q53GI3 561 aa5.61□□□□□ -1.51
RTN1-207ENST00000490111 KIF24Q5T7B8 1368 aa5.61□□□□□ -1.51
RTN1-207ENST00000490111 TMEM92Q6UXU6 159 aa5.61□□□□□ -1.51
RTN1-207ENST00000490111 RASAL3Q86YV0 1011 aa5.61□□□□□ -1.51
RTN1-207ENST00000490111 SIX5Q8N196 739 aa5.61□□□□□ -1.51
RTN1-207ENST00000490111 DEFB123Q8N688 67 aa5.61□□□□□ -1.51
RTN1-207ENST00000490111 PLPP7Q8NBV4 271 aa5.61□□□□□ -1.51
RTN1-207ENST00000490111 DPF3Q92784 378 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms