RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 NID2Q14112 1375 aa22.77■■□□□ 1.24
SYNGR1-207ENST00000489206 ANO1Q5XXA6 986 aa22.77■■□□□ 1.24
SYNGR1-207ENST00000489206 A0A1B0GUL6 1792 aa22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 POLR3DP05423 398 aaPredicted RBP22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 GNAT2P19087 354 aa22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 LIFRP42702 1097 aa22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 RASGRF1Q13972 1273 aa22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 C17orf53Q8N3J3 647 aaPredicted RBP22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 CLIP2Q9UDT6 1046 aa22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 ZNF831Q5JPB2 1677 aa22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 STK36Q9NRP7 1315 aa22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 MYH14Q7Z406 1995 aaKnown RBP22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 BECN2A8MW95 431 aa22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 B4E1Z4 1266 aa22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 ZBTB43O43298 467 aa22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 GTF2F1P35269 517 aaKnown RBP eCLIP22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 CRKLP46109 303 aaKnown RBP22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 MTERF4Q7Z6M4 381 aaKnown RBP22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 IFNL3Q8IZI9 196 aa22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 HELBQ8NG08 1087 aaPredicted RBP22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 IGDCC4Q8TDY8 1250 aa22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 ALG1Q9BT22 464 aa22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 NAPBQ9H115 298 aa22.76■■□□□ 1.23
SYNGR1-207ENST00000489206 NEDD4P46934 1319 aa22.75■■□□□ 1.23
SYNGR1-207ENST00000489206 COL5A3P25940 1745 aaPredicted RBP22.75■■□□□ 1.23
SYNGR1-207ENST00000489206 KIF28PB7ZC32 967 aa22.75■■□□□ 1.23
SYNGR1-207ENST00000489206 CAMTA2O94983 1202 aa22.75■■□□□ 1.23
SYNGR1-207ENST00000489206 IGHMBP2P38935 993 aaKnown RBP22.75■■□□□ 1.23
SYNGR1-207ENST00000489206 MAGEB6Q8N7X4 407 aa22.75■■□□□ 1.23
SYNGR1-207ENST00000489206 SDF4Q9BRK5 362 aa22.75■■□□□ 1.23
SYNGR1-207ENST00000489206 KRT23Q9C075 422 aa22.75■■□□□ 1.23
SYNGR1-207ENST00000489206 LY9Q9HBG7 655 aa22.75■■□□□ 1.23
SYNGR1-207ENST00000489206 PNPLA7Q6ZV29 1317 aa22.75■■□□□ 1.23
SYNGR1-207ENST00000489206 MBD4O95243 580 aa22.74■■□□□ 1.23
SYNGR1-207ENST00000489206 NDUFA8P51970 172 aa22.74■■□□□ 1.23
SYNGR1-207ENST00000489206 DDB1Q16531 1140 aa22.74■■□□□ 1.23
SYNGR1-207ENST00000489206 RAB11FIP4Q86YS3 637 aa22.74■■□□□ 1.23
SYNGR1-207ENST00000489206 MTA3Q9BTC8 594 aa22.74■■□□□ 1.23
SYNGR1-207ENST00000489206 SPATA31A1Q5TZJ5 1347 aa22.74■■□□□ 1.23
SYNGR1-207ENST00000489206 A0A1B0GVL5 298 aa22.74■■□□□ 1.23
SYNGR1-207ENST00000489206 NEMFO60524 1076 aa22.74■■□□□ 1.23
SYNGR1-207ENST00000489206 CMA1P23946 247 aa22.74■■□□□ 1.23
SYNGR1-207ENST00000489206 DHX40Q8IX18 779 aaKnown RBP22.74■■□□□ 1.23
SYNGR1-207ENST00000489206 BPIFA3Q9BQP9 254 aa22.74■■□□□ 1.23
SYNGR1-207ENST00000489206 EPB41L4AQ9HCS5 686 aaPredicted RBP22.74■■□□□ 1.23
SYNGR1-207ENST00000489206 ADAMTS2O95450 1211 aa22.73■■□□□ 1.23
SYNGR1-207ENST00000489206 ATP6V1AP38606 617 aa22.73■■□□□ 1.23
SYNGR1-207ENST00000489206 SLC39A14Q15043 492 aa22.73■■□□□ 1.23
SYNGR1-207ENST00000489206 TMEM67Q5HYA8 995 aa22.73■■□□□ 1.23
SYNGR1-207ENST00000489206 JMYQ8N9B5 988 aa22.73■■□□□ 1.23
SYNGR1-207ENST00000489206 NACAP1Q9BZK3 213 aa22.73■■□□□ 1.23
SYNGR1-207ENST00000489206 KIAA1468Q9P260 1216 aa22.73■■□□□ 1.23
SYNGR1-207ENST00000489206 DENND2AQ9ULE3 1009 aa22.73■■□□□ 1.23
SYNGR1-207ENST00000489206 GOLGA8AA7E2F4 631 aa22.72■■□□□ 1.23
SYNGR1-207ENST00000489206 CHAF1AQ13111 956 aaPredicted RBP22.72■■□□□ 1.23
SYNGR1-207ENST00000489206 KRT40Q6A162 431 aa22.72■■□□□ 1.23
SYNGR1-207ENST00000489206 NFXL1Q6ZNB6 911 aa22.72■■□□□ 1.23
SYNGR1-207ENST00000489206 CASZ1Q86V15 1759 aa22.72■■□□□ 1.23
SYNGR1-207ENST00000489206 LOC102724428A0A0B4J2F2 783 aa22.72■■□□□ 1.23
SYNGR1-207ENST00000489206 PPP6R2O75170 966 aa22.72■■□□□ 1.23
SYNGR1-207ENST00000489206 NTSR2O95665 410 aa22.72■■□□□ 1.23
SYNGR1-207ENST00000489206 IARSP41252 1262 aaKnown RBP22.72■■□□□ 1.23
SYNGR1-207ENST00000489206 SIK1P57059 783 aa22.72■■□□□ 1.23
SYNGR1-207ENST00000489206 ZRSR1Q15695 479 aaKnown RBP22.72■■□□□ 1.23
SYNGR1-207ENST00000489206 NTRK3Q16288 839 aa22.72■■□□□ 1.23
SYNGR1-207ENST00000489206 AXDND1Q5T1B0 1012 aaPredicted RBP22.72■■□□□ 1.23
SYNGR1-207ENST00000489206 AKNAD1Q5T1N1 836 aa22.72■■□□□ 1.23
SYNGR1-207ENST00000489206 VPS37DQ86XT2 251 aa22.72■■□□□ 1.23
SYNGR1-207ENST00000489206 TIGD1Q96MW7 591 aa22.72■■□□□ 1.23
SYNGR1-207ENST00000489206 SPATA31A6Q5VVP1 1343 aa22.71■■□□□ 1.23
SYNGR1-207ENST00000489206 CDC27P30260 824 aa22.71■■□□□ 1.23
SYNGR1-207ENST00000489206 TRIM29Q14134 588 aa22.71■■□□□ 1.23
SYNGR1-207ENST00000489206 MICU3Q86XE3 530 aa22.71■■□□□ 1.23
SYNGR1-207ENST00000489206 STAG1Q8WVM7 1258 aa22.71■■□□□ 1.23
SYNGR1-207ENST00000489206 WASF1Q92558 559 aa22.71■■□□□ 1.23
SYNGR1-207ENST00000489206 SEC31BQ9NQW1 1179 aa22.71■■□□□ 1.23
SYNGR1-207ENST00000489206 BCL9LQ86UU0 1499 aa22.71■■□□□ 1.23
SYNGR1-207ENST00000489206 GSG1L2A8MUP6 293 aa22.7■■□□□ 1.23
SYNGR1-207ENST00000489206 NRBP1Q9UHY1 535 aa22.7■■□□□ 1.23
SYNGR1-207ENST00000489206 RCAN1P53805 252 aa22.7■■□□□ 1.22
SYNGR1-207ENST00000489206 RBM6P78332 1123 aaKnown RBP22.7■■□□□ 1.22
SYNGR1-207ENST00000489206 MFSD6Q6ZSS7 791 aa22.7■■□□□ 1.22
SYNGR1-207ENST00000489206 NKX2-3Q8TAU0 364 aa22.7■■□□□ 1.22
SYNGR1-207ENST00000489206 CDC5LQ99459 802 aaKnown RBP22.7■■□□□ 1.22
SYNGR1-207ENST00000489206 ARMT1Q9H993 441 aa22.7■■□□□ 1.22
SYNGR1-207ENST00000489206 GJB4Q9NTQ9 266 aa22.7■■□□□ 1.22
SYNGR1-207ENST00000489206 ZNF652Q9Y2D9 606 aa22.7■■□□□ 1.22
SYNGR1-207ENST00000489206 SLC12A7Q9Y666 1083 aa22.7■■□□□ 1.22
SYNGR1-207ENST00000489206 CCDC69A6NI79 296 aa22.69■■□□□ 1.22
SYNGR1-207ENST00000489206 IFIT3O14879 490 aaKnown RBP22.69■■□□□ 1.22
SYNGR1-207ENST00000489206 ZNF202O95125 648 aa22.69■■□□□ 1.22
SYNGR1-207ENST00000489206 PRKCSHP14314 528 aaPredicted RBP22.69■■□□□ 1.22
SYNGR1-207ENST00000489206 U2AF2P26368 475 aaKnown RBP eCLIP22.69■■□□□ 1.22
SYNGR1-207ENST00000489206 FAM237AA0A1B0GTK4 181 aa22.69■■□□□ 1.22
SYNGR1-207ENST00000489206 SLC3A2P08195 630 aaKnown RBP22.69■■□□□ 1.22
SYNGR1-207ENST00000489206 GNL2Q13823 731 aaKnown RBP22.69■■□□□ 1.22
SYNGR1-207ENST00000489206 SART3Q15020 963 aaKnown RBP22.69■■□□□ 1.22
SYNGR1-207ENST00000489206 RNF41Q9H4P4 317 aaPredicted RBP22.69■■□□□ 1.22
SYNGR1-207ENST00000489206 FAM217BQ9NTX9 383 aaPredicted RBP22.69■■□□□ 1.22
SYNGR1-207ENST00000489206 ZSWIM5Q9P217 1185 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms