RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 METAP2P50579 478 aaKnown RBP eCLIP13.21□□□□□ -0.29
C4orf3-201ENST00000399075 RBM6P78332 1123 aaKnown RBP13.21□□□□□ -0.29
C4orf3-201ENST00000399075 CCDC144BQ3MJ40 725 aa13.21□□□□□ -0.29
C4orf3-201ENST00000399075 APOA5Q6Q788 366 aa13.21□□□□□ -0.29
C4orf3-201ENST00000399075 CYB5R4Q7L1T6 521 aa13.21□□□□□ -0.29
C4orf3-201ENST00000399075 CCDC144CPQ8IYA2 1237 aa13.21□□□□□ -0.29
C4orf3-201ENST00000399075 STRBPQ96SI9 672 aaKnown RBP13.21□□□□□ -0.29
C4orf3-201ENST00000399075 UBN2Q6ZU65 1347 aa13.21□□□□□ -0.29
C4orf3-201ENST00000399075 RREB1Q92766 1687 aa13.21□□□□□ -0.29
C4orf3-201ENST00000399075 A0A1B0GVL5 298 aa13.21□□□□□ -0.29
C4orf3-201ENST00000399075 POLR3DP05423 398 aaPredicted RBP13.21□□□□□ -0.29
C4orf3-201ENST00000399075 SLC39A14Q15043 492 aa13.21□□□□□ -0.29
C4orf3-201ENST00000399075 AXDND1Q5T1B0 1012 aaPredicted RBP13.21□□□□□ -0.29
C4orf3-201ENST00000399075 DZIP3Q86Y13 1208 aaKnown RBP13.21□□□□□ -0.29
C4orf3-201ENST00000399075 CHD4Q14839 1912 aa13.21□□□□□ -0.3
C4orf3-201ENST00000399075 CICQ96RK0 1608 aaPredicted RBP13.21□□□□□ -0.3
C4orf3-201ENST00000399075 TEX2Q8IWB9 1127 aa13.2□□□□□ -0.3
C4orf3-201ENST00000399075 LRRC8AQ8IWT6 810 aa13.2□□□□□ -0.3
C4orf3-201ENST00000399075 TIGD1Q96MW7 591 aa13.2□□□□□ -0.3
C4orf3-201ENST00000399075 SLIT2O94813 1529 aa13.2□□□□□ -0.3
C4orf3-201ENST00000399075 STK36Q9NRP7 1315 aa13.2□□□□□ -0.3
C4orf3-201ENST00000399075 LAMB2P55268 1798 aa13.2□□□□□ -0.3
C4orf3-201ENST00000399075 ALG1Q9BT22 464 aa13.2□□□□□ -0.3
C4orf3-201ENST00000399075 WWC3Q9ULE0 1092 aa13.2□□□□□ -0.3
C4orf3-201ENST00000399075 COL22A1Q8NFW1 1626 aaPredicted RBP13.2□□□□□ -0.3
C4orf3-201ENST00000399075 DOT1LQ8TEK3 1739 aa13.2□□□□□ -0.3
C4orf3-201ENST00000399075 CTIFO43310 598 aaKnown RBP13.2□□□□□ -0.3
C4orf3-201ENST00000399075 SLC5A1P13866 664 aa13.2□□□□□ -0.3
C4orf3-201ENST00000399075 LIFRP42702 1097 aa13.2□□□□□ -0.3
C4orf3-201ENST00000399075 AOPEPQ8N6M6 819 aa13.2□□□□□ -0.3
C4orf3-201ENST00000399075 IGDCC4Q8TDY8 1250 aa13.2□□□□□ -0.3
C4orf3-201ENST00000399075 AIDAQ96BJ3 306 aa13.2□□□□□ -0.3
C4orf3-201ENST00000399075 RTL9Q8NET4 1388 aa13.19□□□□□ -0.3
C4orf3-201ENST00000399075 FAM237AA0A1B0GTK4 181 aa13.19□□□□□ -0.3
C4orf3-201ENST00000399075 PATL2C9JE40 543 aaKnown RBP13.19□□□□□ -0.3
C4orf3-201ENST00000399075 RIOK3O14730 519 aaKnown RBP13.19□□□□□ -0.3
C4orf3-201ENST00000399075 PPP6R2O75170 966 aa13.19□□□□□ -0.3
C4orf3-201ENST00000399075 APPP05067 770 aa13.19□□□□□ -0.3
C4orf3-201ENST00000399075 ZNF710Q8N1W2 664 aa13.19□□□□□ -0.3
C4orf3-201ENST00000399075 JMYQ8N9B5 988 aa13.19□□□□□ -0.3
C4orf3-201ENST00000399075 SPATA5Q8NB90 893 aa13.19□□□□□ -0.3
C4orf3-201ENST00000399075 KCND1Q9NSA2 647 aa13.19□□□□□ -0.3
C4orf3-201ENST00000399075 GSDMDP57764 484 aa13.19□□□□□ -0.3
C4orf3-201ENST00000399075 MAP3K12Q12852 859 aa13.19□□□□□ -0.3
C4orf3-201ENST00000399075 ZRSR1Q15695 479 aaKnown RBP13.19□□□□□ -0.3
C4orf3-201ENST00000399075 CNNM2Q9H8M5 875 aa13.19□□□□□ -0.3
C4orf3-201ENST00000399075 LY9Q9HBG7 655 aa13.19□□□□□ -0.3
C4orf3-201ENST00000399075 IMPACTQ9P2X3 320 aa13.19□□□□□ -0.3
C4orf3-201ENST00000399075 PHLPP1O60346 1717 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 ZBTB43O43298 467 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 ZNF202O95125 648 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 SLC3A2P08195 630 aaKnown RBP13.18□□□□□ -0.3
C4orf3-201ENST00000399075 U2AF2P26368 475 aaKnown RBP eCLIP13.18□□□□□ -0.3
C4orf3-201ENST00000399075 NLRP12P59046 1061 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 DHX8Q14562 1220 aaKnown RBP13.18□□□□□ -0.3
C4orf3-201ENST00000399075 NTRK3Q16288 839 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 KRT40Q6A162 431 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.18□□□□□ -0.3
C4orf3-201ENST00000399075 VPS37DQ86XT2 251 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 CNPY4Q8N129 248 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 MTA3Q9BTC8 594 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 COL16A1Q07092 1604 aaPredicted RBP13.18□□□□□ -0.3
C4orf3-201ENST00000399075 BCORQ6W2J9 1755 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 SMTNL1A8MU46 457 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 B4E1Z4 1266 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 EXOC5O00471 708 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 PFKFB1P16118 471 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 RAB11FIP4Q86YS3 637 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 OSBPL5Q9H0X9 879 aaPredicted RBP13.18□□□□□ -0.3
C4orf3-201ENST00000399075 KCNG1Q9UIX4 513 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 DENND2AQ9ULE3 1009 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 HPSEQ9Y251 543 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 PAXBP1Q9Y5B6 917 aa13.18□□□□□ -0.3
C4orf3-201ENST00000399075 GNAT2P19087 354 aa13.17□□□□□ -0.3
C4orf3-201ENST00000399075 EIF5P55010 431 aaKnown RBP13.17□□□□□ -0.3
C4orf3-201ENST00000399075 SYCP1Q15431 976 aa13.17□□□□□ -0.3
C4orf3-201ENST00000399075 EPB41L4AQ9HCS5 686 aaPredicted RBP13.17□□□□□ -0.3
C4orf3-201ENST00000399075 GJB4Q9NTQ9 266 aa13.17□□□□□ -0.3
C4orf3-201ENST00000399075 MROH7-TTC4A0A0A0MT08 1334 aa13.17□□□□□ -0.3
C4orf3-201ENST00000399075 PNPLA7Q6ZV29 1317 aa13.17□□□□□ -0.3
C4orf3-201ENST00000399075 CDC27P30260 824 aa13.17□□□□□ -0.3
C4orf3-201ENST00000399075 RASGRF1Q13972 1273 aa13.17□□□□□ -0.3
C4orf3-201ENST00000399075 PTPAQ15257 358 aa13.17□□□□□ -0.3
C4orf3-201ENST00000399075 DPCR1Q3MIW9 517 aa13.17□□□□□ -0.3
C4orf3-201ENST00000399075 SMAP1Q8IYB5 467 aaPredicted RBP13.17□□□□□ -0.3
C4orf3-201ENST00000399075 IFNL3Q8IZI9 196 aa13.17□□□□□ -0.3
C4orf3-201ENST00000399075 NKX2-3Q8TAU0 364 aa13.17□□□□□ -0.3
C4orf3-201ENST00000399075 KRT23Q9C075 422 aa13.17□□□□□ -0.3
C4orf3-201ENST00000399075 BCL2L12Q9HB09 334 aa13.17□□□□□ -0.3
C4orf3-201ENST00000399075 GOLGA8AA7E2F4 631 aa13.17□□□□□ -0.3
C4orf3-201ENST00000399075 IARSP41252 1262 aaKnown RBP13.17□□□□□ -0.3
C4orf3-201ENST00000399075 TMEM67Q5HYA8 995 aa13.17□□□□□ -0.3
C4orf3-201ENST00000399075 NAPBQ9H115 298 aa13.17□□□□□ -0.3
C4orf3-201ENST00000399075 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.17□□□□□ -0.3
C4orf3-201ENST00000399075 FAM217BQ9NTX9 383 aaPredicted RBP13.17□□□□□ -0.3
C4orf3-201ENST00000399075 IKBKBO14920 756 aa13.16□□□□□ -0.3
C4orf3-201ENST00000399075 WDHD1O75717 1129 aaPredicted RBP13.16□□□□□ -0.3
C4orf3-201ENST00000399075 RCAN1P53805 252 aa13.16□□□□□ -0.3
C4orf3-201ENST00000399075 TPM4P67936 248 aa13.16□□□□□ -0.3
C4orf3-201ENST00000399075 TRIM29Q14134 588 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms