RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 HSP90AB3PQ58FF7 597 aa16.6■□□□□ 0.25
SNX20-202ENST00000330943 LRP10Q7Z4F1 713 aa16.6■□□□□ 0.25
SNX20-202ENST00000330943 GOLGA6L9A6NEM1 432 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 CASP7P55210 303 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 ADKP55263 362 aaKnown RBP16.59■□□□□ 0.25
SNX20-202ENST00000330943 RSRC2Q7L4I2 434 aaKnown RBP16.59■□□□□ 0.25
SNX20-202ENST00000330943 RALYLQ86SE5 291 aaKnown RBP16.59■□□□□ 0.25
SNX20-202ENST00000330943 METTL16Q86W50 562 aaKnown RBP16.59■□□□□ 0.25
SNX20-202ENST00000330943 VPS37DQ86XT2 251 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 MB21D2Q8IYB1 491 aaPredicted RBP16.59■□□□□ 0.25
SNX20-202ENST00000330943 DHX58Q96C10 678 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 ANTXR2P58335 489 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 PDE4BQ07343 736 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 KARSQ15046 597 aaKnown RBP16.59■□□□□ 0.25
SNX20-202ENST00000330943 MUM1L1Q5H9M0 696 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 JMYQ8N9B5 988 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 DESI2Q9BSY9 194 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 FUT8Q9BYC5 575 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 FOXP2O15409 715 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 FGAP02671 866 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 CDC27P30260 824 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 ZSCAN26Q16670 478 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 LRRC24Q50LG9 513 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 ALG1Q9BT22 464 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 C19orf44Q9H6X5 657 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 ZSWIM4Q9H7M6 989 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 PCDHA5Q9Y5H7 936 aa16.59■□□□□ 0.25
SNX20-202ENST00000330943 A0A1B0GUL7 405 aa16.58■□□□□ 0.24
SNX20-202ENST00000330943 FOXO4P98177 505 aa16.58■□□□□ 0.24
SNX20-202ENST00000330943 LONRF3Q496Y0 759 aa16.58■□□□□ 0.24
SNX20-202ENST00000330943 CNNM3Q8NE01 707 aa16.58■□□□□ 0.24
SNX20-202ENST00000330943 RABGGTAQ92696 567 aa16.58■□□□□ 0.24
SNX20-202ENST00000330943 GOLGA1Q92805 767 aa16.58■□□□□ 0.24
SNX20-202ENST00000330943 KIFC2Q96AC6 838 aa16.58■□□□□ 0.24
SNX20-202ENST00000330943 ZNF594Q96JF6 807 aaPredicted RBP16.58■□□□□ 0.24
SNX20-202ENST00000330943 PHRF1Q9P1Y6 1649 aaKnown RBP16.58■□□□□ 0.24
SNX20-202ENST00000330943 FOXP4Q8IVH2 680 aaPredicted RBP16.58■□□□□ 0.24
SNX20-202ENST00000330943 NCOA7Q8NI08 942 aa16.58■□□□□ 0.24
SNX20-202ENST00000330943 CCDC12Q8WUD4 166 aaPredicted RBP16.58■□□□□ 0.24
SNX20-202ENST00000330943 NWD2Q9ULI1 1742 aa16.57■□□□□ 0.24
SNX20-202ENST00000330943 STX10O60499 249 aa16.57■□□□□ 0.24
SNX20-202ENST00000330943 PPP6R2O75170 966 aa16.57■□□□□ 0.24
SNX20-202ENST00000330943 TBX2Q13207 712 aaPredicted RBP16.57■□□□□ 0.24
SNX20-202ENST00000330943 RESP18Q5W5W9 173 aa16.57■□□□□ 0.24
SNX20-202ENST00000330943 TC2NQ8N9U0 490 aa16.57■□□□□ 0.24
SNX20-202ENST00000330943 CCDC191Q8NCU4 936 aa16.57■□□□□ 0.24
SNX20-202ENST00000330943 FOXN1O15353 648 aa16.57■□□□□ 0.24
SNX20-202ENST00000330943 SNRPA1P09661 255 aaKnown RBP16.57■□□□□ 0.24
SNX20-202ENST00000330943 RXRAP19793 462 aa16.57■□□□□ 0.24
SNX20-202ENST00000330943 BMP6P22004 513 aa16.57■□□□□ 0.24
SNX20-202ENST00000330943 IL15P40933 162 aaPredicted RBP16.57■□□□□ 0.24
SNX20-202ENST00000330943 LMAN1P49257 510 aa16.57■□□□□ 0.24
SNX20-202ENST00000330943 PTPAQ15257 358 aa16.57■□□□□ 0.24
SNX20-202ENST00000330943 LONRF2Q1L5Z9 754 aa16.57■□□□□ 0.24
SNX20-202ENST00000330943 CCDC102BQ68D86 513 aa16.57■□□□□ 0.24
SNX20-202ENST00000330943 TTC5Q8N0Z6 440 aa16.57■□□□□ 0.24
SNX20-202ENST00000330943 GPR108Q9NPR9 543 aa16.57■□□□□ 0.24
SNX20-202ENST00000330943 MYO1BO43795 1136 aa16.56■□□□□ 0.24
SNX20-202ENST00000330943 SPECC1LQ69YQ0 1117 aa16.56■□□□□ 0.24
SNX20-202ENST00000330943 KRT40Q6A162 431 aa16.56■□□□□ 0.24
SNX20-202ENST00000330943 AK7Q96M32 723 aa16.56■□□□□ 0.24
SNX20-202ENST00000330943 KDM6AO15550 1401 aaPredicted RBP16.56■□□□□ 0.24
SNX20-202ENST00000330943 ARFGEF2Q9Y6D5 1785 aa16.56■□□□□ 0.24
SNX20-202ENST00000330943 ZBTB9Q96C00 473 aa16.56■□□□□ 0.24
SNX20-202ENST00000330943 KCNH3Q9ULD8 1083 aa16.56■□□□□ 0.24
SNX20-202ENST00000330943 H3BQF6 201 aa16.56■□□□□ 0.24
SNX20-202ENST00000330943 ATF3P18847 181 aa16.56■□□□□ 0.24
SNX20-202ENST00000330943 TXLNAP40222 546 aa16.56■□□□□ 0.24
SNX20-202ENST00000330943 SPECC1Q5M775 1068 aa16.56■□□□□ 0.24
SNX20-202ENST00000330943 IRX2Q9BZI1 471 aaPredicted RBP16.56■□□□□ 0.24
SNX20-202ENST00000330943 ADAM21Q9UKJ8 722 aa16.56■□□□□ 0.24
SNX20-202ENST00000330943 TICAM2Q86XR7 235 aa16.55■□□□□ 0.24
SNX20-202ENST00000330943 TRMT44Q8IYL2 757 aaKnown RBP16.55■□□□□ 0.24
SNX20-202ENST00000330943 RAPGEF4Q8WZA2 1011 aa16.55■□□□□ 0.24
SNX20-202ENST00000330943 PHKBQ93100 1093 aa16.55■□□□□ 0.24
SNX20-202ENST00000330943 NFE2L3Q9Y4A8 694 aa16.55■□□□□ 0.24
SNX20-202ENST00000330943 ADAMTS7Q9UKP4 1686 aa16.55■□□□□ 0.24
SNX20-202ENST00000330943 ZNF213O14771 459 aa16.55■□□□□ 0.24
SNX20-202ENST00000330943 MTF1Q14872 753 aa16.55■□□□□ 0.24
SNX20-202ENST00000330943 EYA2O00167 538 aa16.54■□□□□ 0.24
SNX20-202ENST00000330943 METAP2P50579 478 aaKnown RBP eCLIP16.54■□□□□ 0.24
SNX20-202ENST00000330943 PLBD2Q8NHP8 589 aa16.54■□□□□ 0.24
SNX20-202ENST00000330943 MAP3K14Q99558 947 aa16.54■□□□□ 0.24
SNX20-202ENST00000330943 MRPL44Q9H9J2 332 aaKnown RBP16.54■□□□□ 0.24
SNX20-202ENST00000330943 DENND2AQ9ULE3 1009 aa16.54■□□□□ 0.24
SNX20-202ENST00000330943 KAT6BQ8WYB5 2073 aa16.54■□□□□ 0.24
SNX20-202ENST00000330943 ZMYM6O95789 1325 aa16.54■□□□□ 0.24
SNX20-202ENST00000330943 CCDC151A5D8V7 595 aa16.54■□□□□ 0.24
SNX20-202ENST00000330943 FMR1Q06787 632 aaKnown RBP eCLIP16.54■□□□□ 0.24
SNX20-202ENST00000330943 ZNF827Q17R98 1081 aa16.54■□□□□ 0.24
SNX20-202ENST00000330943 JAKMIP3Q5VZ66 844 aa16.54■□□□□ 0.24
SNX20-202ENST00000330943 PUS3Q9BZE2 481 aaKnown RBP16.54■□□□□ 0.24
SNX20-202ENST00000330943 PUS7LQ9H0K6 701 aaKnown RBP16.54■□□□□ 0.24
SNX20-202ENST00000330943 LZTFL1Q9NQ48 299 aa16.54■□□□□ 0.24
SNX20-202ENST00000330943 C4AP0C0L4 1744 aa16.53■□□□□ 0.24
SNX20-202ENST00000330943 C4BP0C0L5 1744 aa16.53■□□□□ 0.24
SNX20-202ENST00000330943 FAM237AA0A1B0GTK4 181 aa16.53■□□□□ 0.24
SNX20-202ENST00000330943 CUTAO60888 179 aa16.53■□□□□ 0.24
SNX20-202ENST00000330943 CHMP4BP1P59074 171 aa16.53■□□□□ 0.24
SNX20-202ENST00000330943 PDE4CQ08493 712 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms