RNA–Protein interactions for RNA: ENSMUST00000218879.1

Srp54b-202, Transcript of Signal recognition particle 54 kDa protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Srp54b, Length 3,642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54b-202ENSMUST00000218879 Cul3Q9JLV5 768 aa12.54□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Zfp651E9PZ11 729 aa12.54□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Casp4P70343 373 aa12.54□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Flt3Q00342 1000 aa12.54□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Nol8Q3UHX0 1147 aaKnown RBP12.54□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Ankrd13aQ80UP5 588 aa12.54□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Cpsf7Q8BTV2 471 aaKnown RBP12.54□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Utp6Q8VCY6 597 aaKnown RBP12.54□□□□□ -0.4
Srp54b-202ENSMUST00000218879 NwcQ9CQI4 244 aa12.54□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Ebag9Q9D0V7 213 aa12.54□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Sapcd2Q9D818 391 aa12.54□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Btg3P50615 252 aa12.53□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Ppp1r14bQ62084 147 aa12.53□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Galnt17Q7TT15 598 aa12.53□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Nrde2Q80XC6 1172 aa12.53□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Cd209bQ8CJ91 325 aa12.53□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Erlin1Q91X78 346 aa12.53□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Pcdhb3Q91XZ7 784 aa12.53□□□□□ -0.4
Srp54b-202ENSMUST00000218879 CarsQ9ER72 831 aaKnown RBP12.53□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Srcin1Q9QWI6 1250 aa12.53□□□□□ -0.4
Srp54b-202ENSMUST00000218879 OatP29758 439 aa12.53□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Bend4P86174 541 aa12.53□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Ttf2Q5NC05 1138 aa12.53□□□□□ -0.4
Srp54b-202ENSMUST00000218879 DymQ8CHY3 669 aa12.53□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Psmc1P62192 440 aa12.52□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Utp18Q5SSI6 552 aaKnown RBP12.52□□□□□ -0.4
Srp54b-202ENSMUST00000218879 GcgrQ61606 485 aa12.52□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Zbtb40Q6PCS8 1258 aa12.52□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Gimap6Q8K349 305 aa12.52□□□□□ -0.4
Srp54b-202ENSMUST00000218879 IncenpQ9WU62 880 aa12.52□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Ccdc146E9Q9F7 977 aa12.52□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Atad2Q8CDM1 1040 aa12.52□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Naa30Q8CES0 364 aa12.52□□□□□ -0.4
Srp54b-202ENSMUST00000218879 Zfp804bA0A0G2JGH6 1343 aa12.52□□□□□ -0.41
Srp54b-202ENSMUST00000218879 DpydQ8CHR6 1025 aa12.52□□□□□ -0.41
Srp54b-202ENSMUST00000218879 ToporslQ9D2F8 683 aa12.52□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Tecpr2Q3UH45 1423 aa12.52□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Unc13bQ9Z1N9 1602 aa12.52□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Gm5814J3QP80 125 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Cd22P35329 862 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Tmco6Q8BQX5 494 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Nat10Q8K224 1024 aaKnown RBP12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Mrfap1Q9CQL7 125 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Stx6Q9JKK1 255 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 PapolbQ9WVP6 641 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Nbr1P97432 988 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Ccdc69Q3TCJ8 202 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Hpcal4Q8BGZ1 191 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Sox30Q8CGW4 782 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Gga1Q8R0H9 635 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Ccdc130Q9D516 385 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 TnmdQ9EP64 317 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Elmsan1E9Q2I4 1089 aaKnown RBP12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 XpcP51612 930 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Psmc4P54775 418 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 SlmapQ3URD3 845 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Lamb3Q61087 1168 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Phc1Q64028 1012 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Trim17Q7TPM3 477 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Rassf6Q80UQ2 353 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Ppp1r3fQ9JIG4 799 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Tnip1Q9WUU8 647 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Wdr46Q9Z0H1 622 aaKnown RBP12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 DnmbpQ6TXD4 1580 aa12.51□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Hoxa10P31310 416 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Mphosph8Q3TYA6 858 aaKnown RBP12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Cdkl5Q3UTQ8 938 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Cwf19l1Q8CI33 537 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Atp6v0a4Q920R6 833 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Jph2Q9ET78 696 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Lemd3Q9WU40 921 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Rims2Q9EQZ7 1530 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 VimP20152 466 aaKnown RBP12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Surf6P70279 355 aaKnown RBP12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Bach1P97302 739 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Lins1Q3U1D0 764 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Cracr2aQ3UP38 310 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Sorbs1Q62417 1290 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Srrm3Q80WV7 648 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 PlgrktQ9D3P8 147 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Znf704Q9ERQ3 566 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Bpifb4A2BGH0 617 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Slfn9B1ARD6 910 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Taf4bG5E8Z2 855 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Inf2Q0GNC1 1273 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Thrap3Q569Z6 951 aaKnown RBP12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Prpf4bQ61136 1007 aaKnown RBP12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 AarsQ8BGQ7 968 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Rhot2Q8JZN7 620 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Stk31Q99MW1 1018 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Sos1Q62245 1319 aa12.5□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Nrxn3Q6P9K9 1571 aa12.49□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Tbc1d2B1AVH7 922 aa12.49□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Cyth3O08967 399 aa12.49□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Stag2O35638 1231 aa12.49□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Luc7l3Q5SUF2 432 aaKnown RBP12.49□□□□□ -0.41
Srp54b-202ENSMUST00000218879 CgasQ8C6L5 507 aa12.49□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Sirt1Q923E4 737 aa12.49□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Ddx20Q9JJY4 825 aaKnown RBP12.49□□□□□ -0.41
Srp54b-202ENSMUST00000218879 Nsd2Q8BVE8 1365 aa12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms