RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Rbm33Q9CXK9 1231 aaKnown RBP10.76□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Fam213aQ9CYH2 218 aa10.76□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Capn10Q9ESK3 666 aa10.76□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Plcg1Q62077 1302 aa10.76□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 CpdO89001 1377 aa10.76□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Rbbp6P97868 1790 aaKnown RBP10.75□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 NmiO35309 314 aa10.75□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 DcxO88809 366 aa10.75□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Cyp2c39P56656 490 aa10.75□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Spata18Q0P557 537 aa10.75□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Mre11Q61216 706 aa10.75□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Cachd1Q6PDJ1 1288 aa10.75□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Spata7Q80VP2 582 aa10.75□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Syne4Q8CII8 388 aa10.75□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Znf521Q6KAS7 1311 aa10.75□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Npc1l1Q6T3U4 1333 aa10.75□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Ank1Q02357 1862 aa10.74□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Eps15P42567 897 aa10.74□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Col19a1Q0VF58 1136 aa10.74□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Gprin1Q3UNH4 932 aa10.74□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Ddx58Q6Q899 926 aa10.74□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Ddx55Q6ZPL9 600 aaKnown RBP10.74□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Cracr2bQ80ZJ8 394 aa10.74□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Prb1Q91X93 504 aa10.74□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Lce1mQ9CR91 182 aa10.74□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Atxn3Q9CVD2 355 aa10.74□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Mrpl12Q9DB15 201 aaKnown RBP10.74□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Swt1Q9DBQ9 907 aa10.74□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Spata31d1aE9QA35 1336 aa10.74□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Jbts17Q8CE72 3214 aa10.74□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Kntc1Q8C3Y4 2207 aa10.73□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Znf496Q5SXI5 585 aa10.73□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 MylipQ8BM54 445 aa10.73□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Ccar1Q8CH18 1146 aaKnown RBP10.73□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 PpatQ8CIH9 517 aa10.73□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Ero1bQ8R2E9 467 aa10.73□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Tmc2Q8R4P4 888 aa10.73□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Polr3dQ91WD1 398 aa10.73□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Leng1Q9DB98 261 aa10.73□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Tmod2Q9JKK7 351 aa10.73□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 SynrgQ5SV85 1306 aa10.73□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Cavin4A2AMM0 362 aa10.72□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 MycP01108 439 aa10.72□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Irf5P56477 497 aa10.72□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Snrpa1P57784 255 aaKnown RBP10.72□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Kcnn2P58390 839 aa10.72□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Btbd1P58544 488 aa10.72□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 PrkczQ02956 592 aa10.72□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 YdjcQ14BV6 310 aa10.72□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Ptpn18Q61152 453 aa10.72□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Prrt3Q6PE13 971 aa10.72□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Vmn1r199Q8R280 367 aa10.72□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Slc44a4Q91VA1 707 aa10.72□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Ehd4Q9EQP2 541 aa10.72□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Ripk4Q9ERK0 786 aa10.72□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Zgrf1Q0VGT4 1863 aa10.72□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Cep350E9Q309 3095 aa10.71□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Cspp1B2RX88 1205 aa10.71□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Arid4aF8VPQ2 1261 aaKnown RBP10.71□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Nck2O55033 380 aa10.71□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Casp1P29452 402 aa10.71□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Dpf3P58269 378 aa10.71□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Klrg2Q3UM83 387 aa10.71□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Gm11437Q5QR91 290 aa10.71□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Crhr2Q60748 411 aa10.71□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Defa-rs10Q64263 91 aa10.71□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Lrfn2Q80TG9 788 aa10.71□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Tmem39bQ810L4 492 aa10.71□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Zswim3Q8CFL8 695 aa10.71□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Usp33Q8R5K2 909 aa10.71□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Spint1Q9R097 507 aa10.71□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Rad9aQ9Z0F6 389 aa10.71□□□□□ -0.69
Pdlim5-209ENSMUST00000196908 Piezo2Q8CD54 2822 aa10.71□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Ccnd3P30282 292 aa10.7□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Nf2P46662 596 aa10.7□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Plcb3P51432 1234 aaKnown RBP10.7□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Npr3P70180 536 aa10.7□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Taok2Q6ZQ29 1240 aa10.7□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Spata21Q8BHW6 681 aa10.7□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Il21rQ9JHX3 529 aa10.7□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Greb1lB9EJV3 1913 aa10.69□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Ms4a4aA0A087WRT7 236 aa10.69□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Oog1E9Q5G7 496 aa10.69□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Rfpl4bJ3QPR6 266 aa10.69□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Lgr6Q3UVD5 967 aa10.69□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Trim58Q5NCC9 485 aa10.69□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Aoc2Q812C9 757 aa10.69□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Lca5lQ8C0X0 741 aa10.69□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 MetrnQ8C1Q4 291 aa10.69□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Tmem143Q8VD26 458 aa10.69□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Cfap99A0A140LIX9 648 aa10.68□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Prss51A0A286YDY8 319 aa10.68□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Btnl4A2CG29 586 aa10.68□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Clrn2B2RVW2 232 aa10.68□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Nol10Q5RJG1 687 aaKnown RBP10.68□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Map3k2Q61083 619 aa10.68□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Phf20Q8BLG0 1010 aaKnown RBP10.68□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Smc5Q8CG46 1101 aaKnown RBP10.68□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Rfc4Q99J62 364 aa10.68□□□□□ -0.7
Pdlim5-209ENSMUST00000196908 Cry2Q9R194 592 aa10.68□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 51.7 ms