Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Gm25239-201ENSMUST00000174915 86 ntBASIC41,03■■■■■ 4,16
Cachd1Q6PDJ1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38,54■■■■□ 3,76
Cachd1Q6PDJ1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37,97■■■■□ 3,67
Cachd1Q6PDJ1 Gm24109-201ENSMUST00000175489 103 ntBASIC36,31■■■■□ 3,4
Cachd1Q6PDJ1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35,23■■■■□ 3,23
Cachd1Q6PDJ1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34,75■■■■□ 3,15
Cachd1Q6PDJ1 Gm15042-201ENSMUST00000120212 883 ntBASIC34,64■■■■□ 3,14
Cachd1Q6PDJ1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34,5■■■■□ 3,11
Cachd1Q6PDJ1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34,35■■■■□ 3,09
Cachd1Q6PDJ1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34,23■■■■□ 3,07
Cachd1Q6PDJ1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34,22■■■■□ 3,07
Cachd1Q6PDJ1 Gm23366-201ENSMUST00000175022 89 ntBASIC34,19■■■■□ 3,06
Cachd1Q6PDJ1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34,1■■■■□ 3,05
Cachd1Q6PDJ1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34,09■■■■□ 3,05
Cachd1Q6PDJ1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33,57■■■□□ 2,96
Cachd1Q6PDJ1 Gm15045-201ENSMUST00000117359 883 ntBASIC33,52■■■□□ 2,96
Cachd1Q6PDJ1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33,1■■■□□ 2,89
Cachd1Q6PDJ1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32,95■■■□□ 2,87
Cachd1Q6PDJ1 Gm25238-201ENSMUST00000174914 89 ntBASIC32,74■■■□□ 2,83
Cachd1Q6PDJ1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32,73■■■□□ 2,83
Cachd1Q6PDJ1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32,5■■■□□ 2,79
Cachd1Q6PDJ1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32,45■■■□□ 2,79
Cachd1Q6PDJ1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32,3■■■□□ 2,76
Cachd1Q6PDJ1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32,29■■■□□ 2,76
Cachd1Q6PDJ1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32,22■■■□□ 2,75
Cachd1Q6PDJ1 Gm25262-201ENSMUST00000174934 133 ntBASIC32,2■■■□□ 2,75
Cachd1Q6PDJ1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32,18■■■□□ 2,74
Cachd1Q6PDJ1 Gm26115-201ENSMUST00000175605 87 ntBASIC31,95■■■□□ 2,71
Cachd1Q6PDJ1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31,87■■■□□ 2,69
Cachd1Q6PDJ1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31,81■■■□□ 2,68
Cachd1Q6PDJ1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31,65■■■□□ 2,66
Cachd1Q6PDJ1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31,58■■■□□ 2,65
Cachd1Q6PDJ1 Gm8109-201ENSMUST00000194076 746 ntBASIC31,48■■■□□ 2,63
Cachd1Q6PDJ1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31,48■■■□□ 2,63
Cachd1Q6PDJ1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31,34■■■□□ 2,61
Cachd1Q6PDJ1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31,24■■■□□ 2,59
Cachd1Q6PDJ1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31,18■■■□□ 2,58
Cachd1Q6PDJ1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31,02■■■□□ 2,56
Cachd1Q6PDJ1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31,02■■■□□ 2,56
Cachd1Q6PDJ1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30,76■■■□□ 2,52
Cachd1Q6PDJ1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30,74■■■□□ 2,51
Cachd1Q6PDJ1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30,57■■■□□ 2,48
Cachd1Q6PDJ1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30,54■■■□□ 2,48
Cachd1Q6PDJ1 Rab21-202ENSMUST00000218831 843 ntBASIC30,46■■■□□ 2,47
Cachd1Q6PDJ1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30,44■■■□□ 2,46
Cachd1Q6PDJ1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30,44■■■□□ 2,46
Cachd1Q6PDJ1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30,4■■■□□ 2,46
Cachd1Q6PDJ1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30,32■■■□□ 2,44
Cachd1Q6PDJ1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30,29■■■□□ 2,44
Cachd1Q6PDJ1 Gm24804-201ENSMUST00000174982 85 ntBASIC30,28■■■□□ 2,44
Cachd1Q6PDJ1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30,26■■■□□ 2,44
Cachd1Q6PDJ1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30,26■■■□□ 2,43
Cachd1Q6PDJ1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30,2■■■□□ 2,43
Cachd1Q6PDJ1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30,08■■■□□ 2,41
Cachd1Q6PDJ1 Gm27325-201ENSMUST00000175467 74 ntBASIC30,08■■■□□ 2,41
Cachd1Q6PDJ1 Zfp131-205ENSMUST00000223812 663 ntBASIC30,02■■■□□ 2,4
Cachd1Q6PDJ1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30,01■■■□□ 2,39
Cachd1Q6PDJ1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29,99■■■□□ 2,39
Cachd1Q6PDJ1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29,97■■■□□ 2,39
Cachd1Q6PDJ1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29,88■■■□□ 2,37
Cachd1Q6PDJ1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29,86■■■□□ 2,37
Cachd1Q6PDJ1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29,83■■■□□ 2,37
Cachd1Q6PDJ1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29,8■■■□□ 2,36
Cachd1Q6PDJ1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29,8■■■□□ 2,36
Cachd1Q6PDJ1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29,77■■■□□ 2,36
Cachd1Q6PDJ1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29,74■■■□□ 2,35
Cachd1Q6PDJ1 Gm17082-201ENSMUST00000166043 1091 ntBASIC29,66■■■□□ 2,34
Cachd1Q6PDJ1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29,65■■■□□ 2,34
Cachd1Q6PDJ1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29,6■■■□□ 2,33
Cachd1Q6PDJ1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29,59■■■□□ 2,33
Cachd1Q6PDJ1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29,57■■■□□ 2,32
Cachd1Q6PDJ1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29,53■■■□□ 2,32
Cachd1Q6PDJ1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29,46■■■□□ 2,31
Cachd1Q6PDJ1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29,43■■■□□ 2,3
Cachd1Q6PDJ1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29,41■■■□□ 2,3
Cachd1Q6PDJ1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29,37■■■□□ 2,29
Cachd1Q6PDJ1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29,35■■■□□ 2,29
Cachd1Q6PDJ1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29,34■■■□□ 2,29
Cachd1Q6PDJ1 Gm27322-201ENSMUST00000184007 104 ntBASIC29,33■■■□□ 2,29
Cachd1Q6PDJ1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC29,31■■■□□ 2,28
Cachd1Q6PDJ1 Gm5987-201ENSMUST00000196433 1151 ntBASIC29,3■■■□□ 2,28
Cachd1Q6PDJ1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29,3■■■□□ 2,28
Cachd1Q6PDJ1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29,25■■■□□ 2,27
Cachd1Q6PDJ1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29,22■■■□□ 2,27
Cachd1Q6PDJ1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29,21■■■□□ 2,27
Cachd1Q6PDJ1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29,21■■■□□ 2,27
Cachd1Q6PDJ1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29,2■■■□□ 2,26
Cachd1Q6PDJ1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29,2■■■□□ 2,26
Cachd1Q6PDJ1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29,19■■■□□ 2,26
Cachd1Q6PDJ1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29,19■■■□□ 2,26
Cachd1Q6PDJ1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29,13■■■□□ 2,25
Cachd1Q6PDJ1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29,11■■■□□ 2,25
Cachd1Q6PDJ1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29,1■■■□□ 2,25
Cachd1Q6PDJ1 Psd-208ENSMUST00000224556 2034 ntBASIC29,09■■■□□ 2,25
Cachd1Q6PDJ1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29,08■■■□□ 2,25
Cachd1Q6PDJ1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29,03■■■□□ 2,24
Cachd1Q6PDJ1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29,01■■■□□ 2,23
Cachd1Q6PDJ1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28,97■■■□□ 2,23
Cachd1Q6PDJ1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28,95■■■□□ 2,22
Cachd1Q6PDJ1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28,93■■■□□ 2,22
Retrieved 100 of 76,532 protein–RNA pairs in 11,3 ms