RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 FAM206AQ9NX38 181 aa1.94□□□□□ -2.1
SKP1-212ENST00000523966 TAS2R8Q9NYW2 309 aa1.94□□□□□ -2.1
SKP1-212ENST00000523966 COMMD3Q9UBI1 195 aa1.94□□□□□ -2.1
SKP1-212ENST00000523966 OR52A1Q9UKL2 312 aa1.94□□□□□ -2.1
SKP1-212ENST00000523966 FBXL3Q9UKT7 428 aa1.94□□□□□ -2.1
SKP1-212ENST00000523966 SLC22A13Q9Y226 551 aa1.94□□□□□ -2.1
SKP1-212ENST00000523966 LHFPL6Q9Y693 200 aa1.94□□□□□ -2.1
SKP1-212ENST00000523966 CACNA1AO00555 2505 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 CHD8Q9HCK8 2581 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 KIAA1549Q9HCM3 1950 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 IGKV1OR2-108A0A075B7D4 117 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 IGKV1D-43A0A0B4J1Z2 117 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 LOC107986453A0A1B0GWG9 222 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 J3QRK9 145 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 PIN1P1O15428 100 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 CRXO43186 299 aaPredicted RBP1.93□□□□□ -2.1
SKP1-212ENST00000523966 HPGDSO60760 199 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 TTRP02766 147 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 UBBP0CG47 229 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 CD79AP11912 226 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 CCL2P13500 99 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 ATF1P18846 271 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 M6PRP20645 277 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 CCL1P22362 96 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 CRYGSP22914 178 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 COL8A2P25067 703 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 S100A2P29034 98 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 FAUP35544 74 aaKnown RBP1.93□□□□□ -2.1
SKP1-212ENST00000523966 RPS27P42677 84 aaKnown RBP1.93□□□□□ -2.1
SKP1-212ENST00000523966 OR10A3P58181 314 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 CTAG1AP78358 180 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 SSBP1Q04837 148 aaKnown RBP1.93□□□□□ -2.1
SKP1-212ENST00000523966 SRSF6Q13247 344 aaKnown RBP1.93□□□□□ -2.1
SKP1-212ENST00000523966 SLC9A3R2Q15599 337 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 GLYATL3Q5SZD4 288 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 TRIQKQ629K1 86 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 Q6ZT83 130 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 LYZL2Q7Z4W2 148 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 ZFP82Q8N141 532 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 Q8N402 240 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 LRRC18Q8N456 261 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 C17orf78Q8N4C9 275 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 ACBD4Q8NC06 268 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 OR8B12Q8NGG6 310 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 CCL17Q92583 94 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 APOBEC3DQ96AK3 386 aaPredicted RBP1.93□□□□□ -2.1
SKP1-212ENST00000523966 MRPS24Q96EL2 167 aaKnown RBP1.93□□□□□ -2.1
SKP1-212ENST00000523966 AMELYQ99218 206 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 S100A13Q99584 98 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 C7orf50Q9BRJ6 194 aaKnown RBP1.93□□□□□ -2.1
SKP1-212ENST00000523966 SUCNR1Q9BXA5 334 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 TTTY10Q9BZA0 68 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 ZNF436Q9C0F3 470 aaPredicted RBP1.93□□□□□ -2.1
SKP1-212ENST00000523966 OR2H1Q9GZK4 316 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 SLC22A4Q9H015 551 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 CST11Q9H112 138 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 GPR84Q9NQS5 396 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 RBM12B-AS1Q9P1G2 102 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 COPZ2Q9P299 210 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 NOP16Q9Y3C1 178 aaKnown RBP1.93□□□□□ -2.1
SKP1-212ENST00000523966 ANKHD1Q8IWZ3 2542 aaKnown RBP1.93□□□□□ -2.1
SKP1-212ENST00000523966 CFAP54Q96N23 3096 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 PKDREJQ9NTG1 2253 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 USP34Q70CQ2 3546 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 NCKAP5O14513 1909 aa1.93□□□□□ -2.1
SKP1-212ENST00000523966 HIVEP3Q5T1R4 2406 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 MYO15AQ9UKN7 3530 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 TNRC6AQ8NDV7 1962 aaKnown RBP1.92□□□□□ -2.1
SKP1-212ENST00000523966 SHANK1Q9Y566 2161 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 DMXL1Q9Y485 3027 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 A0A1B0GTI1 187 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 C5orf49A4QMS7 147 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 NAP1L6A6NFF2 107 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 GGT3PA6NGU5 568 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 RNASEK-C17orf49H0YIS7 233 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 GABARAPH6UMI1 98 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 SULT1C2O00338 296 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 FABP7O15540 132 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 GSTZ1O43708 216 aaPredicted RBP1.92□□□□□ -2.1
SKP1-212ENST00000523966 ORC5O43913 435 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 PFDN1O60925 122 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 CYB5AP00167 134 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 CST4P01036 141 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 IGKV1D-33P01593 117 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 IGKV1-33P01594 117 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 IGLV3-1P01715 115 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 IL7P13232 177 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 CBR1P16152 277 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 AKR1C4P17516 323 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 AGTR1P30556 359 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 RCVRNP35243 200 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 OPRM1P35372 400 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 ZNF93P35789 620 aaPredicted RBP1.92□□□□□ -2.1
SKP1-212ENST00000523966 CAV3P56539 151 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 KRTAP10-1P60331 282 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 ACTBP60709 375 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 ACTG1P63261 375 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 PSG4Q00888 419 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 MEF2BQ02080 365 aaPredicted RBP1.92□□□□□ -2.1
SKP1-212ENST00000523966 BAXQ07812 192 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms