RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SLC39A9Q9NUM3 307 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 MYOM2P54296 1465 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 DISP1Q96F81 1524 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 TTC37Q6PGP7 1564 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 INO80Q9ULG1 1556 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 N4BP2Q86UW6 1770 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 KIF1BO60333 1816 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 CACNA1SQ13698 1873 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 ZNF106Q9H2Y7 1883 aaKnown RBP1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 TRAV7A0A075B6U4 112 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 A0A0J9YX75 114 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 A0A1B0GW64 132 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 TRDV1A0A1B0GX56 115 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 GABARAPH6UMI1 98 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 BCL9O00512 1426 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 DEGS1O15121 323 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 NDUFA2O43678 99 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 MED14O60244 1454 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 DEPDC5O75140 1603 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 ABCA8O94911 1581 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 CRYGAP11844 174 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 MYH8P13535 1937 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 MYH10P35580 1976 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 AKR1C3P42330 323 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 RPS28P62857 69 aaKnown RBP1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 AKR1C1Q04828 323 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 URB2Q14146 1524 aaKnown RBP1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 DEFB115Q30KQ5 88 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 CCDC153Q494R4 210 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 LYRM7Q5U5X0 104 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 Q5XG85 94 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 PREX2Q70Z35 1606 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 KNDC1Q76NI1 1749 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 ANGPTL5Q86XS5 388 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 PRR15Q8IV56 129 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 VWDEQ8N2E2 1590 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 LRRC18Q8N456 261 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 OR4D11Q8NGI4 311 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 OR4C16Q8NGL9 310 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 OR9Q1Q8NGQ5 310 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 IFT140Q96RY7 1462 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 TMEM70Q9BUB7 260 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 MRPL32Q9BYC8 188 aaKnown RBP1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 TMEM126AQ9H061 195 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 OSTCQ9NRP0 149 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 TXNL4BQ9NX01 149 aaKnown RBP1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 MED31Q9Y3C7 131 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 NUBP2Q9Y5Y2 271 aa1.53□□□□□ -2.16
HMGB1P49-201ENST00000418882 MYH2Q9UKX2 1941 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 KIF20BQ96Q89 1820 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 PPLO60437 1756 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 TET3O43151 1660 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 ABCA9Q8IUA7 1624 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 MAP3K4Q9Y6R4 1608 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 CDC42BPGQ6DT37 1551 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 SAMD9LQ8IVG5 1584 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 SETBP1Q9Y6X0 1596 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 TRPM2O94759 1503 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 ZNF518AQ6AHZ1 1483 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 PPIP5K1Q6PFW1 1433 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 FBN3Q75N90 2809 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 KIF24Q5T7B8 1368 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 ANKRD36BQ8N2N9 1353 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 TRAV36DV7A0A075B6V5 113 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 TRGV5A0A0B4J1U4 118 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 IRGMA1A4Y4 181 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 TMEM235A6NFC5 223 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 TMEM212A6NML5 194 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 ODF3BA8MYP8 253 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 TP53I11O14683 189 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 OVOL1O14753 267 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 CDS2O95674 445 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 APOA2P02652 100 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 S100A4P26447 101 aaKnown RBP1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 EIF2B2P49770 351 aaKnown RBP1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 CKS1BP61024 79 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 HIST1H4AP62805 103 aaKnown RBP1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 RTL8BQ17RB0 113 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 FAM27BQ5VT28 67 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 C1orf140Q5VVS0 124 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 MIR17HGQ75NE6 70 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 HIST3H2BBQ8N257 126 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 SIGLECL1Q8N7X8 197 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 OR8J3Q8NGG0 315 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 BORCS8Q96FH0 119 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 RTL8AQ9BWD3 113 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 TAF9BQ9HBM6 251 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 TMEM138Q9NPI0 162 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 MRPL16Q9NX20 251 aaKnown RBP1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 CKLFQ9UBR5 152 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 LAMA4Q16363 1823 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 CRYBG1Q9Y4K1 1723 aa1.52□□□□□ -2.17
HMGB1P49-201ENST00000418882 PREX1Q8TCU6 1659 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 QRICH2Q9H0J4 1663 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 ERVK-7P63135 1459 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 ERCC6Q03468 1493 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 MAGI1Q96QZ7 1491 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 NRXN1Q9ULB1 1477 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 PRG4Q92954 1404 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 TRAPPC8Q9Y2L5 1435 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms