RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 P01799 113 aa20.14■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Pmis2Q497Q9 96 aa20.14■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Lamtor1Q9CQ22 161 aa20.14■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Q3TEI4 1023 aa20.14■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Gli3Q61602 1583 aa20.14■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Cd209gD3Z5D4 194 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Rdh16O54909 317 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Saa1P05366 122 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Fgf12P61329 243 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Arl14epQ8BIX3 276 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Olfr482Q8VG03 323 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 HpxQ91X72 460 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Fzr1Q9R1K5 493 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Rnf39A2RT81 352 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Gm5225J3QPL3 108 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 SelenotP62342 195 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Eif4ebp2P70445 120 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Prrx2Q06348 247 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Ifna11Q61716 190 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Znf250Q7TNU6 535 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Slc24a5Q8C261 501 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Gltpd2Q8K0R6 321 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Vkorc1Q9CRC0 161 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Ap5s1Q9D742 170 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Rnf7Q9WTZ1 113 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Scgb1b19F6WYW0 93 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Il11P47873 199 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Zdhhc23Q5Y5T3 425 aa20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Rbmxl2Q9DAE2 385 aaKnown RBP20.13■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Cdx4Q07424 282 aa20.12■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Nxph1Q61200 271 aa20.12■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Oxgr1Q6IYF8 337 aa20.12■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Lrp11Q8CB67 483 aa20.12■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Fscn3Q9QXW4 498 aa20.12■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Ascl5M0QWB7 188 aa20.12■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Mtch2Q791V5 303 aa20.12■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Fam241aQ9CZL2 131 aa20.12■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Trav13d-3J3QMG8 112 aa20.11■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Tnfsf14Q9QYH9 239 aa20.11■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Numa1E9Q7G0 2094 aaKnown RBP20.11■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 C4bP01029 1738 aa20.11■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Trbv15A0A0A6YYE3 115 aa20.11■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Gm44501A8R0T9 150 aa20.11■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Depp1Q8K2F3 205 aa20.11■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Zfp707F6QUN2 391 aa20.11■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 S100a4P07091 101 aa20.11■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Ms4a13Q5FWC3 203 aa20.11■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 MyadmO35682 320 aaKnown RBP20.11■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Adcyap1O70176 175 aa20.1■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Gm1673Q3UR78 90 aa20.1■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Olfr1259Q8VEZ1 309 aa20.1■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Ascl3Q9JJR7 174 aa20.1■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Btaf1E9QAE3 1848 aa20.1■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Ighv9-2A0A0B4J1J4 117 aa20.1■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Zfp433A0A0J9YUD4 600 aa20.1■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Gm32687A0A1W2P6H7 600 aa20.1■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Slc25a17O70579 307 aa20.1■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Q3U1D9 316 aa20.1■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Trav3-3Q5R1C3 114 aa20.1■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Rab29Q91YQ1 204 aa20.1■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 MyocosQ3UWS6 143 aa20.1■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 G0s2Q61585 103 aa20.1■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Hoxb3P09026 433 aa20.1■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Ctsll3Q3ULP7 331 aa20.1■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Cacna1dQ99246 2179 aa20.1■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Tmem116A0A0G2JGD3 401 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Tmem74bA2AU34 232 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 P01822 137 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 CortP56469 109 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Taar4Q5QD15 347 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Zfp874bQ7M6X2 447 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Q8CDS7 251 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Sfrp4Q9Z1N6 351 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Ighv7-1A0A075B5S2 121 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Ccdc188F6WEU2 249 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Gm13199Q8C8E0 125 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Olfr123Q8VFQ1 309 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Fam219aQ9D772 157 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Marveld3Q9D956 376 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 SmpxQ9DC77 85 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 P01675 107 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 P01676 107 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 P01677 107 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 P01678 107 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Fam213bQ9DB60 201 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Tspan32Q9JHH2 256 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Akip1Q9JJR5 212 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 NinQ61043 2035 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Trpm6Q8CIR4 2028 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Q6PIU9 354 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Olfr904Q7TRC9 310 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Acp7Q8BX37 438 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Tmprss3Q8K1T0 453 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Vsig10l2A0A140LHF2 776 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Tex38A2A8T7 201 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 C1ql1O88992 258 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 VegfcP97953 415 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Mrgprb2Q3KNA1 338 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Kazald1Q8BJ66 313 aa20.09■□□□□ 0.81
Sh3rf1-201ENSMUST00000034060 Igkv12-38A0A0G2JEI7 115 aa20.08■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 135.2 ms