RNA–Protein interactions for RNA: ENST00000463579.1

SBDS-203, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-203ENST00000463579 SDK1Q7Z5N4 2213 aa1.6□□□□□ -2.15
SBDS-203ENST00000463579 RTTNQ86VV8 2226 aa1.6□□□□□ -2.15
SBDS-203ENST00000463579 SORL1Q92673 2214 aa1.6□□□□□ -2.15
SBDS-203ENST00000463579 TRAV4A0A0B4J268 109 aa1.6□□□□□ -2.15
SBDS-203ENST00000463579 C19orf84I3L1E1 186 aa1.6□□□□□ -2.15
SBDS-203ENST00000463579 GPX1P07203 203 aa1.6□□□□□ -2.15
SBDS-203ENST00000463579 HSPE1P61604 102 aaKnown RBP1.6□□□□□ -2.15
SBDS-203ENST00000463579 KRTAP21-3Q3LHN1 58 aa1.6□□□□□ -2.15
SBDS-203ENST00000463579 GOLT1AQ6ZVE7 132 aa1.6□□□□□ -2.15
SBDS-203ENST00000463579 SIGLECL1Q8N7X8 197 aa1.6□□□□□ -2.15
SBDS-203ENST00000463579 OR5A1Q8NGJ0 315 aa1.6□□□□□ -2.15
SBDS-203ENST00000463579 WFDC5Q8TCV5 224 aa1.6□□□□□ -2.15
SBDS-203ENST00000463579 PHB2Q99623 299 aa1.6□□□□□ -2.15
SBDS-203ENST00000463579 PLXNA3P51805 1871 aa1.6□□□□□ -2.15
SBDS-203ENST00000463579 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
SBDS-203ENST00000463579 CLDN25C9JDP6 229 aa1.59□□□□□ -2.15
SBDS-203ENST00000463579 GPX2P18283 190 aa1.59□□□□□ -2.15
SBDS-203ENST00000463579 CASP1P29466 404 aa1.59□□□□□ -2.15
SBDS-203ENST00000463579 PPP1R2P41236 205 aa1.59□□□□□ -2.15
SBDS-203ENST00000463579 NDUFA5Q16718 116 aa1.59□□□□□ -2.15
SBDS-203ENST00000463579 PPP1R2P3Q6NXS1 205 aa1.59□□□□□ -2.15
SBDS-203ENST00000463579 HIST3H2BBQ8N257 126 aa1.59□□□□□ -2.15
SBDS-203ENST00000463579 CEP19Q96LK0 163 aa1.59□□□□□ -2.15
SBDS-203ENST00000463579 OSTCQ9NRP0 149 aa1.59□□□□□ -2.15
SBDS-203ENST00000463579 CKLFQ9UBR5 152 aa1.59□□□□□ -2.15
SBDS-203ENST00000463579 COL11A1P12107 1806 aaPredicted RBP1.59□□□□□ -2.16
SBDS-203ENST00000463579 RTL1A6NKG5 1358 aa1.59□□□□□ -2.16
SBDS-203ENST00000463579 SMARCA4P51532 1647 aa1.58□□□□□ -2.16
SBDS-203ENST00000463579 PTPRSQ13332 1948 aa1.58□□□□□ -2.16
SBDS-203ENST00000463579 TOPBP1Q92547 1522 aa1.58□□□□□ -2.16
SBDS-203ENST00000463579 IGKV1D-42A0A075B6H8 117 aa1.58□□□□□ -2.16
SBDS-203ENST00000463579 IGKV1-9A0A0C4DH69 117 aa1.58□□□□□ -2.16
SBDS-203ENST00000463579 A0A0D9SG52 128 aa1.58□□□□□ -2.16
SBDS-203ENST00000463579 TRAPPC13A5PLN9 417 aa1.58□□□□□ -2.16
SBDS-203ENST00000463579 TMEM238C9JI98 176 aa1.58□□□□□ -2.16
SBDS-203ENST00000463579 SDCBPO00560 298 aaPredicted RBP1.58□□□□□ -2.16
SBDS-203ENST00000463579 ERP29P30040 261 aaKnown RBP1.58□□□□□ -2.16
SBDS-203ENST00000463579 MAGEA12P43365 314 aa1.58□□□□□ -2.16
SBDS-203ENST00000463579 ATP5G3P48201 142 aa1.58□□□□□ -2.16
SBDS-203ENST00000463579 ZNF846Q147U1 533 aa1.58□□□□□ -2.16
SBDS-203ENST00000463579 ZNF826PQ6ZT77 177 aa1.58□□□□□ -2.16
SBDS-203ENST00000463579 FP248Q71RG6 208 aaPredicted RBP1.58□□□□□ -2.16
SBDS-203ENST00000463579 DEFB128Q7Z7B8 93 aa1.58□□□□□ -2.16
SBDS-203ENST00000463579 AP3S1Q92572 193 aa1.58□□□□□ -2.16
SBDS-203ENST00000463579 PAIP2Q9BPZ3 127 aaKnown RBP1.58□□□□□ -2.16
SBDS-203ENST00000463579 GINS4Q9BRT9 223 aa1.58□□□□□ -2.16
SBDS-203ENST00000463579 MUC6Q6W4X9 2439 aa1.58□□□□□ -2.16
SBDS-203ENST00000463579 TRBV19A0A075B6N1 114 aa1.57□□□□□ -2.16
SBDS-203ENST00000463579 PRB1P04280 392 aa1.57□□□□□ -2.16
SBDS-203ENST00000463579 COX6A1P12074 109 aa1.57□□□□□ -2.16
SBDS-203ENST00000463579 FKBP2P26885 142 aaKnown RBP1.57□□□□□ -2.16
SBDS-203ENST00000463579 S100A5P33763 92 aa1.57□□□□□ -2.16
SBDS-203ENST00000463579 AKR1C3P42330 323 aa1.57□□□□□ -2.16
SBDS-203ENST00000463579 LYG2Q86SG7 212 aa1.57□□□□□ -2.16
SBDS-203ENST00000463579 WFDC11Q8NEX6 87 aa1.57□□□□□ -2.16
SBDS-203ENST00000463579 OR8D4Q8NGM9 314 aa1.57□□□□□ -2.16
SBDS-203ENST00000463579 MBD3L1Q8WWY6 194 aa1.57□□□□□ -2.16
SBDS-203ENST00000463579 YIPF3Q9GZM5 350 aa1.57□□□□□ -2.16
SBDS-203ENST00000463579 CST9LQ9H4G1 147 aa1.57□□□□□ -2.16
SBDS-203ENST00000463579 EIF3AQ14152 1382 aaKnown RBP1.57□□□□□ -2.16
SBDS-203ENST00000463579 STRCP1A6NGW2 1772 aa1.57□□□□□ -2.16
SBDS-203ENST00000463579 MAST2Q6P0Q8 1798 aa1.57□□□□□ -2.16
SBDS-203ENST00000463579 TRGV2A0A075B6R0 118 aa1.56□□□□□ -2.16
SBDS-203ENST00000463579 TCL1BO95988 128 aa1.56□□□□□ -2.16
SBDS-203ENST00000463579 UBBP0CG47 229 aa1.56□□□□□ -2.16
SBDS-203ENST00000463579 SPI1P17947 270 aa1.56□□□□□ -2.16
SBDS-203ENST00000463579 S100A4P26447 101 aaKnown RBP1.56□□□□□ -2.16
SBDS-203ENST00000463579 PIGPP57054 158 aa1.56□□□□□ -2.16
SBDS-203ENST00000463579 YPEL3P61236 119 aaPredicted RBP1.56□□□□□ -2.16
SBDS-203ENST00000463579 KRR1Q13601 381 aaKnown RBP1.56□□□□□ -2.16
SBDS-203ENST00000463579 DPPA3Q6W0C5 159 aa1.56□□□□□ -2.16
SBDS-203ENST00000463579 AAED1Q7RTV5 226 aa1.56□□□□□ -2.16
SBDS-203ENST00000463579 TRAPPC6BQ86SZ2 158 aa1.56□□□□□ -2.16
SBDS-203ENST00000463579 ZNF563Q8TA94 476 aa1.56□□□□□ -2.16
SBDS-203ENST00000463579 STAG3L4Q8TBR4 150 aa1.56□□□□□ -2.16
SBDS-203ENST00000463579 GPR146Q96CH1 333 aa1.56□□□□□ -2.16
SBDS-203ENST00000463579 MIXL1Q9H2W2 232 aa1.56□□□□□ -2.16
SBDS-203ENST00000463579 BAZ2BQ9UIF8 2168 aaKnown RBP1.56□□□□□ -2.16
SBDS-203ENST00000463579 CPAMD8Q8IZJ3 1885 aa1.56□□□□□ -2.16
SBDS-203ENST00000463579 DOCK3Q8IZD9 2030 aa1.56□□□□□ -2.16
SBDS-203ENST00000463579 CCDC88CQ9P219 2028 aa1.56□□□□□ -2.16
SBDS-203ENST00000463579 GBF1Q92538 1859 aa1.55□□□□□ -2.16
SBDS-203ENST00000463579 MEIKINA0A087WXM9 373 aa1.55□□□□□ -2.16
SBDS-203ENST00000463579 A0A087X0T9 212 aa1.55□□□□□ -2.16
SBDS-203ENST00000463579 IGKV2-29A2NJV5 120 aaPredicted RBP1.55□□□□□ -2.16
SBDS-203ENST00000463579 OR4E1P0C645 316 aa1.55□□□□□ -2.16
SBDS-203ENST00000463579 RNASE4P34096 147 aaKnown RBP1.55□□□□□ -2.16
SBDS-203ENST00000463579 ELOBQ15370 118 aa1.55□□□□□ -2.16
SBDS-203ENST00000463579 RHEBQ15382 184 aa1.55□□□□□ -2.16
SBDS-203ENST00000463579 KHDC3LQ587J8 217 aa1.55□□□□□ -2.16
SBDS-203ENST00000463579 EXOC3-AS1Q8N2X6 119 aa1.55□□□□□ -2.16
SBDS-203ENST00000463579 C3orf56Q8N813 242 aa1.55□□□□□ -2.16
SBDS-203ENST00000463579 OR13D1Q8NGV5 346 aa1.55□□□□□ -2.16
SBDS-203ENST00000463579 AQP3Q92482 292 aa1.55□□□□□ -2.16
SBDS-203ENST00000463579 SLAMF6Q96DU3 332 aa1.55□□□□□ -2.16
SBDS-203ENST00000463579 PRRT1Q99946 306 aa1.55□□□□□ -2.16
SBDS-203ENST00000463579 STOML2Q9UJZ1 356 aa1.55□□□□□ -2.16
SBDS-203ENST00000463579 PRNDQ9UKY0 176 aa1.55□□□□□ -2.16
SBDS-203ENST00000463579 EPDR1Q9UM22 224 aa1.55□□□□□ -2.16
SBDS-203ENST00000463579 ZFHX2Q9C0A1 2572 aaPredicted RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms