RNA–Protein interactions for RNA: ENST00000463579.1

SBDS-203, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-203ENST00000463579 AEBP2Q6ZN18 517 aaPredicted RBP22.04■■□□□ 1.12
SBDS-203ENST00000463579 CHIC1Q5VXU3 224 aa21.79■■□□□ 1.08
SBDS-203ENST00000463579 PHF23Q9BUL5 403 aaPredicted RBP19.14■□□□□ 0.65
SBDS-203ENST00000463579 SENP3Q9H4L4 574 aaPredicted RBP18.75■□□□□ 0.59
SBDS-203ENST00000463579 PLPPR3Q6T4P5 718 aa17.84■□□□□ 0.45
SBDS-203ENST00000463579 FOXD1Q16676 465 aa17.32■□□□□ 0.36
SBDS-203ENST00000463579 ADRA2BP18089 450 aa16.87■□□□□ 0.29
SBDS-203ENST00000463579 PPP6R1Q9UPN7 881 aa16.83■□□□□ 0.28
SBDS-203ENST00000463579 PIAS4Q8N2W9 510 aaPredicted RBP16.44■□□□□ 0.22
SBDS-203ENST00000463579 MSH5O43196 834 aa15.95■□□□□ 0.14
SBDS-203ENST00000463579 PPP4R3CPQ6ZMV5 832 aa15.74■□□□□ 0.11
SBDS-203ENST00000463579 KCNA4P22459 653 aa15.6■□□□□ 0.09
SBDS-203ENST00000463579 SCAF1Q9H7N4 1312 aaKnown RBP15.53■□□□□ 0.08
SBDS-203ENST00000463579 NCBP3Q53F19 620 aaKnown RBP15.46■□□□□ 0.07
SBDS-203ENST00000463579 CNKSR2Q8WXI2 1034 aa15.26■□□□□ 0.03
SBDS-203ENST00000463579 MAPK8IP2Q13387 824 aaPredicted RBP15.23■□□□□ 0.03
SBDS-203ENST00000463579 NPM3O75607 178 aaKnown RBP15.13■□□□□ 0.01
SBDS-203ENST00000463579 DMRT2Q9Y5R5 561 aa14.98□□□□□ -0.01
SBDS-203ENST00000463579 SLC4A1APQ9BWU0 796 aaKnown RBP14.95□□□□□ -0.02
SBDS-203ENST00000463579 RNF216Q9NWF9 866 aaPredicted RBP14.89□□□□□ -0.03
SBDS-203ENST00000463579 EHMT2Q96KQ7 1210 aa14.79□□□□□ -0.04
SBDS-203ENST00000463579 HOXD11P31277 338 aaPredicted RBP14.74□□□□□ -0.05
SBDS-203ENST00000463579 DNAJC5BQ9UF47 199 aa14.63□□□□□ -0.07
SBDS-203ENST00000463579 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
SBDS-203ENST00000463579 DCAF8L1A6NGE4 600 aa14.41□□□□□ -0.1
SBDS-203ENST00000463579 FOXD4L1Q9NU39 408 aa14.33□□□□□ -0.12
SBDS-203ENST00000463579 ZBTB22O15209 634 aa14.31□□□□□ -0.12
SBDS-203ENST00000463579 SLC4A2P04920 1241 aa14.21□□□□□ -0.13
SBDS-203ENST00000463579 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.14□□□□□ -0.15
SBDS-203ENST00000463579 POTEDQ86YR6 584 aa14.07□□□□□ -0.16
SBDS-203ENST00000463579 MYCNP04198 464 aaPredicted RBP14.02□□□□□ -0.17
SBDS-203ENST00000463579 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.85□□□□□ -0.19
SBDS-203ENST00000463579 HNRNPUL2Q1KMD3 747 aaKnown RBP13.85□□□□□ -0.19
SBDS-203ENST00000463579 U3KPZ7 1027 aaPredicted RBP13.85□□□□□ -0.19
SBDS-203ENST00000463579 ATXN8OSP0DMR3 200 aa13.82□□□□□ -0.2
SBDS-203ENST00000463579 SAMD1Q6SPF0 538 aaPredicted RBP13.8□□□□□ -0.2
SBDS-203ENST00000463579 APLP2Q06481 763 aa13.68□□□□□ -0.22
SBDS-203ENST00000463579 RNF39Q9H2S5 420 aa13.64□□□□□ -0.23
SBDS-203ENST00000463579 ATF5Q9Y2D1 282 aaPredicted RBP13.56□□□□□ -0.24
SBDS-203ENST00000463579 C1QBPQ07021 282 aaKnown RBP13.53□□□□□ -0.24
SBDS-203ENST00000463579 CAPN15O75808 1086 aa13.41□□□□□ -0.26
SBDS-203ENST00000463579 ZNF219Q9P2Y4 722 aaPredicted RBP13.41□□□□□ -0.26
SBDS-203ENST00000463579 TRHP20396 242 aaPredicted RBP13.4□□□□□ -0.26
SBDS-203ENST00000463579 SPINK5Q9NQ38 1064 aaPredicted RBP13.4□□□□□ -0.26
SBDS-203ENST00000463579 POLA2Q14181 598 aa13.21□□□□□ -0.29
SBDS-203ENST00000463579 CACNB1Q02641 598 aaPredicted RBP13.2□□□□□ -0.3
SBDS-203ENST00000463579 ABCB7O75027 752 aa13.14□□□□□ -0.31
SBDS-203ENST00000463579 FBLN2P98095 1184 aa13.11□□□□□ -0.31
SBDS-203ENST00000463579 FKBP8Q14318 412 aa13.11□□□□□ -0.31
SBDS-203ENST00000463579 DSG3P32926 999 aa13.06□□□□□ -0.32
SBDS-203ENST00000463579 ZBTB12Q9Y330 459 aaPredicted RBP13.05□□□□□ -0.32
SBDS-203ENST00000463579 MKRN4PQ13434 485 aaPredicted RBP12.98□□□□□ -0.33
SBDS-203ENST00000463579 SPDYE4A6NLX3 237 aa12.89□□□□□ -0.35
SBDS-203ENST00000463579 OSCARQ8IYS5 282 aa12.72□□□□□ -0.37
SBDS-203ENST00000463579 ZNF692Q9BU19 519 aaPredicted RBP12.69□□□□□ -0.38
SBDS-203ENST00000463579 SPDYE2BA6NHP3 402 aa12.68□□□□□ -0.38
SBDS-203ENST00000463579 SPDYE6P0CI01 402 aa12.68□□□□□ -0.38
SBDS-203ENST00000463579 SPDYE2Q495Y8 402 aa12.68□□□□□ -0.38
SBDS-203ENST00000463579 FBXO3Q9UK99 471 aa12.63□□□□□ -0.39
SBDS-203ENST00000463579 PROM2Q8N271 834 aa12.61□□□□□ -0.39
SBDS-203ENST00000463579 SSUH2Q9Y2M2 353 aa12.56□□□□□ -0.4
SBDS-203ENST00000463579 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
SBDS-203ENST00000463579 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
SBDS-203ENST00000463579 VASPP50552 380 aaPredicted RBP12.39□□□□□ -0.43
SBDS-203ENST00000463579 STAG3Q9UJ98 1225 aa12.39□□□□□ -0.43
SBDS-203ENST00000463579 AKT1S1Q96B36 256 aa12.38□□□□□ -0.43
SBDS-203ENST00000463579 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
SBDS-203ENST00000463579 SPDYE1Q8NFV5 336 aaPredicted RBP12.28□□□□□ -0.44
SBDS-203ENST00000463579 RTN4Q9NQC3 1192 aaKnown RBP12.28□□□□□ -0.44
SBDS-203ENST00000463579 PLCD3Q8N3E9 789 aa12.26□□□□□ -0.45
SBDS-203ENST00000463579 REM2Q8IYK8 340 aaPredicted RBP12.25□□□□□ -0.45
SBDS-203ENST00000463579 MIER1Q8N108 512 aa12.23□□□□□ -0.45
SBDS-203ENST00000463579 KLHL34Q8N239 644 aa12.22□□□□□ -0.45
SBDS-203ENST00000463579 CLEC11AQ9Y240 323 aa12.22□□□□□ -0.45
SBDS-203ENST00000463579 PLEKHG5O94827 1062 aa12.21□□□□□ -0.45
SBDS-203ENST00000463579 IFNLR1Q8IU57 520 aaPredicted RBP12.21□□□□□ -0.45
SBDS-203ENST00000463579 PRR29P0C7W0 189 aa12.15□□□□□ -0.46
SBDS-203ENST00000463579 SPOCK2Q92563 424 aa12.1□□□□□ -0.47
SBDS-203ENST00000463579 ZBTB47Q9UFB7 747 aaPredicted RBP12.1□□□□□ -0.47
SBDS-203ENST00000463579 PITPNM1O00562 1244 aa12.09□□□□□ -0.47
SBDS-203ENST00000463579 CREBZFQ9NS37 354 aa11.97□□□□□ -0.49
SBDS-203ENST00000463579 CIZ1Q9ULV3 898 aaPredicted RBP11.89□□□□□ -0.51
SBDS-203ENST00000463579 PKD2Q13563 968 aa11.88□□□□□ -0.51
SBDS-203ENST00000463579 NPM1P06748 294 aaKnown RBP eCLIP11.87□□□□□ -0.51
SBDS-203ENST00000463579 CHRDL2Q6WN34 429 aa11.87□□□□□ -0.51
SBDS-203ENST00000463579 ECM2O94769 699 aaPredicted RBP11.84□□□□□ -0.51
SBDS-203ENST00000463579 CHADLQ6NUI6 762 aa11.84□□□□□ -0.51
SBDS-203ENST00000463579 MNX1P50219 401 aaPredicted RBP11.83□□□□□ -0.52
SBDS-203ENST00000463579 DCAF8L2P0C7V8 631 aa11.82□□□□□ -0.52
SBDS-203ENST00000463579 GSE1Q14687 1217 aa11.82□□□□□ -0.52
SBDS-203ENST00000463579 PRKAR2AP13861 404 aaKnown RBP11.81□□□□□ -0.52
SBDS-203ENST00000463579 FXR2P51116 673 aaKnown RBP eCLIP11.81□□□□□ -0.52
SBDS-203ENST00000463579 NUBP1P53384 320 aa11.81□□□□□ -0.52
SBDS-203ENST00000463579 DCAF8Q5TAQ9 597 aa11.81□□□□□ -0.52
SBDS-203ENST00000463579 FAM212AQ96EL1 285 aa11.79□□□□□ -0.52
SBDS-203ENST00000463579 FARP1Q9Y4F1 1045 aaPredicted RBP11.78□□□□□ -0.52
SBDS-203ENST00000463579 TRIM41Q8WV44 630 aa11.77□□□□□ -0.53
SBDS-203ENST00000463579 PIP4P2Q8N4L2 257 aa11.75□□□□□ -0.53
SBDS-203ENST00000463579 RASEFQ8IZ41 740 aa11.72□□□□□ -0.53
SBDS-203ENST00000463579 RGL2O15211 777 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms