RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 EIF4E3Q8N5X7 224 aaKnown RBP17.24■□□□□ 0.35
SPAST-204ENST00000621856 OR10W1Q8NGF6 305 aa17.24■□□□□ 0.35
SPAST-204ENST00000621856 PSMG3Q9BT73 122 aaPredicted RBP17.24■□□□□ 0.35
SPAST-204ENST00000621856 TBL2Q9Y4P3 447 aaKnown RBP17.24■□□□□ 0.35
SPAST-204ENST00000621856 MED13LQ71F56 2210 aa17.23■□□□□ 0.35
SPAST-204ENST00000621856 SMCO3A2RU48 225 aa17.23■□□□□ 0.35
SPAST-204ENST00000621856 NUDT19A8MXV4 375 aa17.23■□□□□ 0.35
SPAST-204ENST00000621856 ACTL6BO94805 426 aa17.23■□□□□ 0.35
SPAST-204ENST00000621856 CRYGBP07316 175 aa17.23■□□□□ 0.35
SPAST-204ENST00000621856 ERHP84090 104 aaKnown RBP17.23■□□□□ 0.35
SPAST-204ENST00000621856 PRSS8Q16651 343 aa17.23■□□□□ 0.35
SPAST-204ENST00000621856 BTNL8Q6UX41 500 aa17.23■□□□□ 0.35
SPAST-204ENST00000621856 SIGLEC9Q9Y336 463 aa17.23■□□□□ 0.35
SPAST-204ENST00000621856 RAB19A4D1S5 217 aa17.22■□□□□ 0.35
SPAST-204ENST00000621856 IGKV1D-33P01593 117 aa17.22■□□□□ 0.35
SPAST-204ENST00000621856 IGKV1-33P01594 117 aa17.22■□□□□ 0.35
SPAST-204ENST00000621856 SNCAP37840 140 aa17.22■□□□□ 0.35
SPAST-204ENST00000621856 HNF4GQ14541 408 aa17.22■□□□□ 0.35
SPAST-204ENST00000621856 IL34Q6ZMJ4 242 aa17.22■□□□□ 0.35
SPAST-204ENST00000621856 GGACTQ9BVM4 153 aa17.22■□□□□ 0.35
SPAST-204ENST00000621856 SPG11Q96JI7 2443 aa17.22■□□□□ 0.35
SPAST-204ENST00000621856 SLC25A16P16260 332 aa17.21■□□□□ 0.35
SPAST-204ENST00000621856 DLK1P80370 383 aa17.21■□□□□ 0.35
SPAST-204ENST00000621856 HES1Q14469 280 aa17.21■□□□□ 0.35
SPAST-204ENST00000621856 HABP2Q14520 560 aaPredicted RBP17.21■□□□□ 0.35
SPAST-204ENST00000621856 PLGLAQ15195 96 aa17.21■□□□□ 0.35
SPAST-204ENST00000621856 TNXAQ16473 311 aa17.21■□□□□ 0.35
SPAST-204ENST00000621856 MRGPRG-AS1Q2M3A8 158 aa17.21■□□□□ 0.35
SPAST-204ENST00000621856 FBXL15Q9H469 300 aa17.21■□□□□ 0.35
SPAST-204ENST00000621856 TIMM9Q9Y5J7 89 aa17.21■□□□□ 0.35
SPAST-204ENST00000621856 PRSS46E5RG02 174 aa17.21■□□□□ 0.35
SPAST-204ENST00000621856 E7EUB6 86 aa17.21■□□□□ 0.35
SPAST-204ENST00000621856 TSPAN15O95858 294 aa17.21■□□□□ 0.35
SPAST-204ENST00000621856 MOSP00540 346 aa17.21■□□□□ 0.35
SPAST-204ENST00000621856 MAS1LP35410 378 aa17.21■□□□□ 0.35
SPAST-204ENST00000621856 ATP5IP56385 69 aaPredicted RBP17.21■□□□□ 0.35
SPAST-204ENST00000621856 KRTAP10-9P60411 292 aa17.21■□□□□ 0.35
SPAST-204ENST00000621856 PAX8Q06710 450 aa17.21■□□□□ 0.35
SPAST-204ENST00000621856 DYNAPQ8N1N2 210 aa17.21■□□□□ 0.35
SPAST-204ENST00000621856 C17orf50Q8WW18 174 aa17.21■□□□□ 0.35
SPAST-204ENST00000621856 CGB1A6NKQ9 187 aa17.2■□□□□ 0.34
SPAST-204ENST00000621856 CD24P25063 80 aa17.2■□□□□ 0.34
SPAST-204ENST00000621856 RPL27AP46776 148 aaKnown RBP17.2■□□□□ 0.34
SPAST-204ENST00000621856 GNB1P62873 340 aa17.2■□□□□ 0.34
SPAST-204ENST00000621856 SERF2P84101 59 aa17.2■□□□□ 0.34
SPAST-204ENST00000621856 MMDQ15546 238 aa17.2■□□□□ 0.34
SPAST-204ENST00000621856 TUSC1Q2TAM9 212 aa17.2■□□□□ 0.34
SPAST-204ENST00000621856 C2orf83Q53S99 150 aa17.2■□□□□ 0.34
SPAST-204ENST00000621856 PPP1R27Q86WC6 154 aa17.2■□□□□ 0.34
SPAST-204ENST00000621856 ZNF709Q8N972 641 aa17.2■□□□□ 0.34
SPAST-204ENST00000621856 ABCA2Q9BZC7 2435 aa17.19■□□□□ 0.34
SPAST-204ENST00000621856 INS-IGF2F8WCM5 200 aa17.19■□□□□ 0.34
SPAST-204ENST00000621856 SNRNP70P08621 437 aaKnown RBP17.19■□□□□ 0.34
SPAST-204ENST00000621856 RNASE2P10153 161 aaKnown RBP17.19■□□□□ 0.34
SPAST-204ENST00000621856 DPPA3Q6W0C5 159 aa17.19■□□□□ 0.34
SPAST-204ENST00000621856 OR2T10Q8NGZ9 312 aa17.19■□□□□ 0.34
SPAST-204ENST00000621856 KIAA1456Q9P272 454 aa17.19■□□□□ 0.34
SPAST-204ENST00000621856 WDR83OSQ9Y284 106 aa17.19■□□□□ 0.34
SPAST-204ENST00000621856 TACC2O95359 2948 aa17.19■□□□□ 0.34
SPAST-204ENST00000621856 AGPAT2O15120 278 aa17.18■□□□□ 0.34
SPAST-204ENST00000621856 ELLP55199 621 aaPredicted RBP17.18■□□□□ 0.34
SPAST-204ENST00000621856 UQCC3Q6UW78 93 aa17.18■□□□□ 0.34
SPAST-204ENST00000621856 MRPL41Q8IXM3 137 aaKnown RBP17.18■□□□□ 0.34
SPAST-204ENST00000621856 LYPD6BQ8NI32 183 aa17.18■□□□□ 0.34
SPAST-204ENST00000621856 MALSU1Q96EH3 234 aa17.18■□□□□ 0.34
SPAST-204ENST00000621856 EAF1Q96JC9 268 aaPredicted RBP17.18■□□□□ 0.34
SPAST-204ENST00000621856 CHD6Q8TD26 2715 aa17.18■□□□□ 0.34
SPAST-204ENST00000621856 C17orf112F2Z3M2 114 aa17.18■□□□□ 0.34
SPAST-204ENST00000621856 NPFFO15130 113 aa17.18■□□□□ 0.34
SPAST-204ENST00000621856 NBR2O15453 112 aa17.18■□□□□ 0.34
SPAST-204ENST00000621856 SAA4P35542 130 aa17.18■□□□□ 0.34
SPAST-204ENST00000621856 BSXQ3C1V8 233 aa17.18■□□□□ 0.34
SPAST-204ENST00000621856 NPCDR1Q9BY65 106 aa17.18■□□□□ 0.34
SPAST-204ENST00000621856 A0A1B0GV50 99 aa17.17■□□□□ 0.34
SPAST-204ENST00000621856 A0A1B0GW64 132 aa17.17■□□□□ 0.34
SPAST-204ENST00000621856 MSMBP08118 114 aa17.17■□□□□ 0.34
SPAST-204ENST00000621856 OR13C7P0DN81 318 aa17.17■□□□□ 0.34
SPAST-204ENST00000621856 MDKP21741 143 aaPredicted RBP17.17■□□□□ 0.34
SPAST-204ENST00000621856 COMPP49747 757 aaPredicted RBP17.17■□□□□ 0.34
SPAST-204ENST00000621856 WT1-ASQ06250 92 aa17.17■□□□□ 0.34
SPAST-204ENST00000621856 CENPVQ7Z7K6 275 aaPredicted RBP17.17■□□□□ 0.34
SPAST-204ENST00000621856 BEX4Q9NWD9 120 aaPredicted RBP17.17■□□□□ 0.34
SPAST-204ENST00000621856 CENPVL3A0A0U1RRI6 287 aa17.16■□□□□ 0.34
SPAST-204ENST00000621856 H2AFB1P0C5Y9 115 aa17.16■□□□□ 0.34
SPAST-204ENST00000621856 SUB1P53999 127 aaKnown RBP eCLIP17.16■□□□□ 0.34
SPAST-204ENST00000621856 TMEM41BQ5BJD5 291 aa17.16■□□□□ 0.34
SPAST-204ENST00000621856 NARS2Q96I59 477 aaKnown RBP17.16■□□□□ 0.34
SPAST-204ENST00000621856 VSIRQ9H7M9 311 aa17.16■□□□□ 0.34
SPAST-204ENST00000621856 MPDU1O75352 247 aa17.16■□□□□ 0.34
SPAST-204ENST00000621856 ZP3P21754 424 aa17.16■□□□□ 0.34
SPAST-204ENST00000621856 AKR1C1Q04828 323 aa17.16■□□□□ 0.34
SPAST-204ENST00000621856 ARSJQ5FYB0 599 aaPredicted RBP17.16■□□□□ 0.34
SPAST-204ENST00000621856 FFAR4Q5NUL3 377 aa17.16■□□□□ 0.34
SPAST-204ENST00000621856 TREML4Q6UXN2 200 aa17.16■□□□□ 0.34
SPAST-204ENST00000621856 BPIFCQ8NFQ6 507 aa17.16■□□□□ 0.34
SPAST-204ENST00000621856 NPBQ8NG41 125 aa17.16■□□□□ 0.34
SPAST-204ENST00000621856 LINC00052Q96N35 136 aa17.16■□□□□ 0.34
SPAST-204ENST00000621856 NPVFQ9HCQ7 196 aa17.16■□□□□ 0.34
SPAST-204ENST00000621856 RPRMQ9NS64 109 aa17.16■□□□□ 0.34
SPAST-204ENST00000621856 CRYBG3Q68DQ2 2970 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms